CF835210
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835210 vs. ExPASy Swiss-Prot
Match: RLA1_HUMAN (60S acidic ribosomal protein P1 OS=Homo sapiens GN=RPLP1 PE=1 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.446e-13 Identity = 44/109 (40.37%), Postives = 52/109 (47.71%), Query Frame = -2 Query: 213 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVG----SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFSLFD 527 E AC Y+ LILHDD + VT +KI AL+KAA V +E +WP LFAK N+ LI NVG + ESDDDMGF LFD Sbjct: 6 ELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
BLAST of CF835210 vs. ExPASy Swiss-Prot
Match: RLA1_BOVIN (60S acidic ribosomal protein P1 OS=Bos taurus GN=RPLP1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 6.446e-13 Identity = 44/109 (40.37%), Postives = 52/109 (47.71%), Query Frame = -2 Query: 213 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVG----SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFSLFD 527 E AC Y+ LILHDD + VT +KI AL+KAA V +E +WP LFAK N+ LI NVG + ESDDDMGF LFD Sbjct: 6 ELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSTAAAPAEEKKVEAKKEESEESDDDMGFGLFD 114
BLAST of CF835210 vs. ExPASy Swiss-Prot
Match: RLA1_ALTAL (60S acidic ribosomal protein P1 OS=Alternaria alternata GN=ALTA12 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.436e-12 Identity = 42/106 (39.62%), Postives = 57/106 (53.77%), Query Frame = -2 Query: 213 EQACTYATLILHDDGIAVTAEKIAALVKAANV-QIESYWPSLFAKLAEKKNLDDLILNVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFSLFD 527 E A +YA LIL DDG+ +TA+K+ +L+KAA + ++E W +LFAK E K++ DL+LNVGS ESD+DMGF LFD Sbjct: 5 ELATSYAALILADDGVDITADKLQSLIKAAKIEEVEPIWTTLFAKALEGKDVKDLLLNVGSGGGAAPLPEALLLRWRAADAAPAAEEKKEEEKEESDEDMGFGLFD 110
BLAST of CF835210 vs. ExPASy Swiss-Prot
Match: RLA1_RAT (60S acidic ribosomal protein P1 OS=Rattus norvegicus GN=Rplp1 PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.875e-12 Identity = 43/109 (39.45%), Postives = 52/109 (47.71%), Query Frame = -2 Query: 213 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVG----SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFSLFD 527 E AC Y+ LILHDD + VT +KI AL+KAA V +E +WP LFAK N+ LI NVG + ES+DDMGF LFD Sbjct: 6 ELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGPAPSAAAAPAEEKKVEAKKEESEESEDDMGFGLFD 114
BLAST of CF835210 vs. ExPASy Swiss-Prot
Match: RLA1_MOUSE (60S acidic ribosomal protein P1 OS=Mus musculus GN=Rplp1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.875e-12 Identity = 43/109 (39.45%), Postives = 52/109 (47.71%), Query Frame = -2 Query: 213 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVG----SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFSLFD 527 E AC Y+ LILHDD + VT +KI AL+KAA V +E +WP LFAK N+ LI NVG + ES+DDMGF LFD Sbjct: 6 ELACIYSALILHDDEVTVTEDKINALIKAAGVSVEPFWPGLFAKALANVNIGSLICNVGAGGPAPAAGAAPAGGAAPSTAAAPAEEKKVEAKKEESEESEDDMGFGLFD 114
BLAST of CF835210 vs. ExPASy Swiss-Prot
Match: RLA1_OSCBR (60S acidic ribosomal protein P1 OS=Oscheius brevesophaga GN=rpl-21 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.199e-12 Identity = 42/107 (39.25%), Postives = 54/107 (50.47%), Query Frame = -2 Query: 213 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNV--GSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFSLFD 527 E AC YA LIL DD +A+T +KIA L+KAAN++ E +WP LFAK E ++ +LI +V G+ ESDDDMGF L D Sbjct: 6 ELACVYAALILQDDEVAITGDKIATLLKAANIEFEPFWPGLFAKALEGVDVKNLITSVSSGASAGPAQAAAAAPAGGAPAAAAPAESKEGRRSQGESDDDMGFGLLD 112
BLAST of CF835210 vs. ExPASy Swiss-Prot
Match: RLA1_CHICK (60S acidic ribosomal protein P1 OS=Gallus gallus GN=RPLP1 PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.199e-12 Identity = 43/109 (39.45%), Postives = 52/109 (47.71%), Query Frame = -2 Query: 213 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNV----GSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFSLFD 527 E AC Y+ LILHDD + VT +KI AL+KAA V +E +WP LFAK ++ LI NV G+ ESDDDMGF LFD Sbjct: 6 ELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANIDIGSLICNVGAGGGAPAAAAPAGGAAPAGGGAAPAEEKKEEEKKEESEESDDDMGFGLFD 114
BLAST of CF835210 vs. ExPASy Swiss-Prot
Match: RLA1_DICDI (60S acidic ribosomal protein P1 OS=Dictyostelium discoideum GN=rplp1 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.178e-12 Identity = 41/110 (37.27%), Postives = 55/110 (50.00%), Query Frame = -2 Query: 213 IMAGEQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVG-SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFSLFD 539 I E AC Y+ L+L DDGI +TA+KI L++AAN+ + S+WP L+A+ K N+ +L+LN G S ESDDDMG LFD Sbjct: 4 IKTEELACIYSGLLLQDDGIEITADKIKTLLEAANITVASHWPGLYARSLAKVNIPELLLNAGSSGAAGAAPVAAATSAAAPAAAAKKETKKEEVKKEESDDDMGMGLFD 113
BLAST of CF835210 vs. ExPASy Swiss-Prot
Match: RLA1_ARTSA (60S acidic ribosomal protein P1 OS=Artemia salina PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 5.457e-12 Identity = 39/105 (37.14%), Postives = 49/105 (46.67%), Query Frame = -2 Query: 213 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFSLFD 527 E AC YA LIL DD + +T EK+ +++AA V +E YWP LF K E +L +I NVGS E D+DMGF LFD Sbjct: 6 ELACVYAALILLDDDVDITTEKVNTILRAAGVSVEPYWPGLFTKALEGLDLKSMITNVGSGVGAAPAAGGAAAATEAPAAKEEKKEEKKEESEEEDEDMGFGLFD 110
BLAST of CF835210 vs. ExPASy Swiss-Prot
Match: RLA3_SCHPO (60S acidic ribosomal protein P1-alpha 3 OS=Schizosaccharomyces pombe GN=rpa3 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.127e-12 Identity = 41/108 (37.96%), Postives = 57/108 (52.78%), Query Frame = -2 Query: 213 AGEQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVGS-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDDDMGFSLFD 533 A E A +Y+ LIL D+GI +T++K+ +L KAANV +E W ++FAK E K+L +L+LN+GS ESD+DMGF LFD Sbjct: 3 ASELATSYSALILADEGIEITSDKLLSLTKAANVDVEPIWATIFAKALEGKDLKELLLNIGSAAAAPAAGGAGAPAAAAGGEAAAEEQKEEAKEEEESDEDMGFGLFD 110 The following BLAST results are available for this feature:
BLAST of CF835210 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835210 ID=CF835210; Name=CF835210; organism=Citrus sinensis; type=EST; length=591bpback to top |