CF835868
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_ALCBS (Malate dehydrogenase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=mdh PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.738e-19 Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = -3 Query: 283 WVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 483 W GT EG WVSMG+Y DGSY + G+IYSFP TC+NG+WTIVQG +++F R K+ T +E +EE+ Sbjct: 254 WALGTDEGDWVSMGIYSDGSYGIQEGLIYSFPCTCKNGDWTIVQGLEVNDFSRGKMQATEQELAEER 320
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_HALHL (Malate dehydrogenase OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=mdh PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 5.056e-19 Identity = 40/68 (58.82%), Postives = 50/68 (73.53%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DW GTPEG W SM V DGSY + AG+IYSFPVTCR G++ IV G S+D+F R ++D TA E +EE+ Sbjct: 251 DWALGTPEGEWTSMAVPSDGSYGIEAGLIYSFPVTCRGGDYKIVSGLSVDDFSRARMDQTAAELAEER 318
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_TERTT (Malate dehydrogenase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=mdh PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 6.604e-19 Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DW G+PEG WVSMGVY DGSY + G+IYSFP C+NG+W IVQG SIDEF + ++ T E E+ Sbjct: 251 DWALGSPEGDWVSMGVYSDGSYGIEKGLIYSFPCVCKNGDWEIVQGLSIDEFSQARMTATETELQGER 318
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_MYCPA (Malate dehydrogenase OS=Mycobacterium paratuberculosis GN=mdh PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 8.625e-19 Identity = 40/68 (58.82%), Postives = 50/68 (73.53%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DW+ GTP G WVSM V DGSY VP G+I SFPVT ++G+WTIVQG IDEF R ++D T E ++E+ Sbjct: 253 DWLLGTPAGDWVSMAVISDGSYGVPEGLISSFPVTTKDGDWTIVQGLEIDEFSRSRIDKTTAELADER 320
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_MYCA1 (Malate dehydrogenase OS=Mycobacterium avium (strain 104) GN=mdh PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 8.625e-19 Identity = 40/68 (58.82%), Postives = 50/68 (73.53%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DW+ GTP G WVSM V DGSY VP G+I SFPVT ++G+WTIVQG IDEF R ++D T E ++E+ Sbjct: 253 DWLLGTPAGDWVSMAVISDGSYGVPEGLISSFPVTTKDGDWTIVQGLEIDEFSRSRIDKTTAELADER 320
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_CELJU (Malate dehydrogenase OS=Cellvibrio japonicus (strain Ueda107) GN=mdh PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 8.625e-19 Identity = 39/68 (57.35%), Postives = 47/68 (69.12%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DW GTP WVSMGVY DGSY + G+IYSFP C+NG+W IVQG I+EF R K+ T +E EE+ Sbjct: 251 DWALGTPANDWVSMGVYSDGSYGIEKGLIYSFPCVCKNGDWEIVQGLDINEFSRAKMTATEKELQEER 318
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_ARTAT (Malate dehydrogenase OS=Arthrobacter aurescens (strain TC1) GN=mdh PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.277e-18 Identity = 38/69 (55.07%), Postives = 50/69 (72.46%), Query Frame = -3 Query: 280 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKA 486 DW+ GTPEG WVSM V DGSY VP G++YS+PVT G W IV+G +++F R+K+D TA E +E+A Sbjct: 252 DWLLGTPEGDWVSMAVASDGSYGVPEGLMYSYPVTTSGGNWEIVEGLEVNDFSRRKMDATAAELFDERA 320
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDHC_DICDI (Probable malate dehydrogenase 3 OS=Dictyostelium discoideum GN=mdhC PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.277e-18 Identity = 41/71 (57.75%), Postives = 51/71 (71.83%), Query Frame = -3 Query: 274 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKALA 486 DWV GT EG +VSMGVY DGSY VP G+I+SFPV C NG++TIVQG +D+ + ++LT EE EK A Sbjct: 257 DWVLGTAEGEYVSMGVYSDGSYGVPEGLIFSFPVKCANGKYTIVQGLQMDDLSKNLINLTTEELVAEKTTA 327
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_DEIDV (Malate dehydrogenase OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=mdh PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 7.301e-18 Identity = 40/68 (58.82%), Postives = 48/68 (70.59%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DW GT EG WVSMG+ DGSY VP G+IY FPVT ++G++ IVQG I EF R K+D TA E EE+ Sbjct: 253 DWALGTSEGEWVSMGIPSDGSYGVPEGLIYGFPVTVKDGKYQIVQGLEISEFSRGKMDATARELEEER 320
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_MYCLE (Malate dehydrogenase OS=Mycobacterium leprae GN=mdh PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 9.536e-18 Identity = 38/68 (55.88%), Postives = 50/68 (73.53%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DW+ GTPEG WVSM V DGSY VP G+I SFPVT +G+WTIV+G ID+F R ++D + E ++E+ Sbjct: 253 DWLLGTPEGNWVSMAVVSDGSYGVPEGLISSFPVTTTDGDWTIVRGLGIDDFSRGRIDKSTAELADER 320 The following BLAST results are available for this feature:
BLAST of CF835868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835868 ID=CF835868; Name=CF835868; organism=Citrus sinensis; type=EST; length=488bpback to top |