CF835868
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDHC2_ARATH (Malate dehydrogenase, cytoplasmic 2 OS=Arabidopsis thaliana GN=At5g43330 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.283e-30 Identity = 61/74 (82.43%), Postives = 65/74 (87.84%), Query Frame = -3 Query: 265 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKALAYSC 486 DWV GTPEGT+VSMGVY DGSYNVPAG+IYSFPVTCRNGEWTIVQG ID+ RKK+DLTAEE EEK LAYSC Sbjct: 257 DWVVGTPEGTFVSMGVYSDGSYNVPAGLIYSFPVTCRNGEWTIVQGLPIDDASRKKMDLTAEELKEEKDLAYSC 330
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDHC_MESCR (Malate dehydrogenase, cytoplasmic OS=Mesembryanthemum crystallinum GN=MDH PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.188e-30 Identity = 59/74 (79.73%), Postives = 63/74 (85.14%), Query Frame = -3 Query: 265 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKALAYSC 486 DWV GTPEGTWVSMGVY DGSYNVPAG+IYSFPVTC+NGEWTIVQG ID+ RKK+D TA E EEK LAYSC Sbjct: 257 DWVLGTPEGTWVSMGVYSDGSYNVPAGIIYSFPVTCKNGEWTIVQGLPIDDDSRKKMDATAAELVEEKTLAYSC 330
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDHC_MEDSA (Malate dehydrogenase, cytoplasmic OS=Medicago sativa GN=CMDH PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 2.858e-30 Identity = 60/74 (81.08%), Postives = 66/74 (89.19%), Query Frame = -3 Query: 265 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKALAYSC 486 DWV GTP+GT+VSMGVY DGSYNVP+G+IYSFPVTC NGEW IVQG SIDEF RKKLDLTAEE +EEK LA+SC Sbjct: 257 DWVLGTPQGTFVSMGVYSDGSYNVPSGLIYSFPVTCANGEWKIVQGLSIDEFSRKKLDLTAEELTEEKNLAHSC 330
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDHC_ORYSJ (Malate dehydrogenase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os10g0478200 PE=1 SV=3) HSP 1 Score: 129.028 bits (323), Expect = 1.086e-29 Identity = 59/74 (79.73%), Postives = 63/74 (85.14%), Query Frame = -3 Query: 265 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKALAYSC 486 DWV GTPEGT+VSMGVY DGSY VPAG+IYSFPVTC GEWTIVQG IDEF RKK+D TA+E SEEK LAYSC Sbjct: 257 DWVLGTPEGTFVSMGVYSDGSYGVPAGLIYSFPVTCSGGEWTIVQGLPIDEFSRKKMDATAQELSEEKTLAYSC 330
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDHC1_ARATH (Malate dehydrogenase, cytoplasmic 1 OS=Arabidopsis thaliana GN=At1g04410 PE=1 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 1.852e-29 Identity = 58/74 (78.38%), Postives = 65/74 (87.84%), Query Frame = -3 Query: 265 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKALAYSC 486 DWV GTPEGT+VSMGVY DGSY+VP+G+IYSFPVTCRNG+W+IVQG IDE RKK+DLTAEE EEK LAYSC Sbjct: 257 DWVLGTPEGTFVSMGVYSDGSYSVPSGLIYSFPVTCRNGDWSIVQGLPIDEVSRKKMDLTAEELKEEKDLAYSC 330
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDHC_BETVU (Malate dehydrogenase, cytoplasmic OS=Beta vulgaris GN=NR1 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 3.160e-29 Identity = 57/74 (77.03%), Postives = 62/74 (83.78%), Query Frame = -3 Query: 265 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKALAYSC 486 DWV GTPEGTWVSMGVY DGSYNVPAG+IYSFPVTC++GEW IVQG IDE R+K+D T E EEKALAYSC Sbjct: 257 DWVLGTPEGTWVSMGVYSDGSYNVPAGIIYSFPVTCKDGEWKIVQGLPIDEVSRQKMDATGAELVEEKALAYSC 330
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDHC_MAIZE (Malate dehydrogenase, cytoplasmic OS=Zea mays PE=2 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 2.675e-28 Identity = 56/74 (75.68%), Postives = 62/74 (83.78%), Query Frame = -3 Query: 265 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKALAYSC 486 DWV GTPEGT+VSMGVY DGSY VP+G+IYSFPVTC GEW IVQG IDEF RKK+D TA+E +EEK LAYSC Sbjct: 257 DWVLGTPEGTFVSMGVYSDGSYGVPSGLIYSFPVTCSGGEWKIVQGLPIDEFSRKKMDATAQELTEEKTLAYSC 330
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_SACD2 (Malate dehydrogenase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=mdh PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 4.573e-20 Identity = 41/68 (60.29%), Postives = 48/68 (70.59%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DW GTPE WVSMGVY DGSY + G+IYSFP C+NG+W IVQG +IDEF R K+ T E EE+ Sbjct: 251 DWALGTPENDWVSMGVYSDGSYGIEEGLIYSFPCVCKNGDWEIVQGLTIDEFSRAKMTATENELKEER 318
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDHA_DICDI (Probable malate dehydrogenase 1 OS=Dictyostelium discoideum GN=mdhA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 7.801e-20 Identity = 43/73 (58.90%), Postives = 53/73 (72.60%), Query Frame = -3 Query: 268 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKALAYS 486 DW+ GT +G VSM VY DGSYNVP G+I+SFPVTC NG+WTIVQG I+ ++K+D T +E EEK A S Sbjct: 316 DWLLGTKDGEHVSMAVYSDGSYNVPKGLIFSFPVTCHNGQWTIVQGLKINSSTQQKIDATIKELQEEKETAMS 388
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_DEIGD (Malate dehydrogenase OS=Deinococcus geothermalis (strain DSM 11300) GN=mdh PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.019e-19 Identity = 41/68 (60.29%), Postives = 50/68 (73.53%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DW GTPEG WVSM V DGSY +P G+IY FPV CRNG++ IVQG I +F R+K+D TA+E EE+ Sbjct: 257 DWALGTPEGEWVSMAVPSDGSYGIPEGLIYGFPVRCRNGQYEIVQGLEISDFSRQKMDATAKELEEER 324 The following BLAST results are available for this feature:
BLAST of CF835868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835868 ID=CF835868; Name=CF835868; organism=Citrus sinensis; type=EST; length=488bpback to top |