CF835868
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_RALSO (Malate dehydrogenase OS=Ralstonia solanacearum GN=mdh PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.334e-11 Identity = 29/69 (42.03%), Postives = 48/69 (69.57%), Query Frame = -3 Query: 280 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKA 486 DWV G+ G V+MG+ +G Y +P V++ FPVT NG++ +V+GF +D + R+K+++T +E EE+A Sbjct: 255 DWVLGS-NGKIVTMGIPSNGDYEIPQDVMFGFPVTTANGKYEVVKGFEVDAYSREKINITLKELEEERA 322
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_METPP (Malate dehydrogenase OS=Methylibium petroleiphilum (strain PM1) GN=mdh PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.742e-11 Identity = 31/68 (45.59%), Postives = 43/68 (63.24%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DW GT G WV+MGV +G Y +P V++ FPVTC NGE+ IV G +ID F ++ ++ T E E+ Sbjct: 255 DWALGT-NGAWVTMGVPSNGEYGIPKDVMFGFPVTCANGEYKIVDGLAIDAFSQECINKTLAELQGEQ 321
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH1_RHOFD (Malate dehydrogenase 1 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=mdh1 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 2.275e-11 Identity = 29/69 (42.03%), Postives = 43/69 (62.32%), Query Frame = -3 Query: 280 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKA 486 DW GT G WV+MG+ DG Y +P ++ FPVTC GE+ +VQ ID F ++ ++ T +E +E+A Sbjct: 255 DWALGT-NGKWVTMGIPSDGQYGIPKETMFGFPVTCEGGEYKVVQNLPIDAFSQECINKTLKELQDEQA 322
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_RALEH (Malate dehydrogenase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=mdh PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.880e-11 Identity = 30/69 (43.48%), Postives = 46/69 (66.67%), Query Frame = -3 Query: 280 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKA 486 DWV GT G V+MG+ +G Y +PA ++ +PVT NG++ IV+G ID + ++K+++T E EEKA Sbjct: 253 DWVLGT-NGKVVTMGIPSNGEYGIPADTMFGYPVTTANGKYEIVKGLEIDAYSQEKINITLNELEEEKA 320
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_ACICJ (Malate dehydrogenase OS=Acidiphilium cryptum (strain JF-5) GN=mdh PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.619e-11 Identity = 30/68 (44.12%), Postives = 43/68 (63.24%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DWV G+ +G WVSM + DGSY +P G+++ PVT + G T V +ID F + +LD+T E EE+ Sbjct: 253 DWVVGS-DGRWVSMAIPSDGSYGIPEGIMFGVPVTTQGGVVTRVPNLAIDAFAQSRLDITLNELKEER 319
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_RALPJ (Malate dehydrogenase OS=Ralstonia pickettii (strain 12J) GN=mdh PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.645e-11 Identity = 30/69 (43.48%), Postives = 45/69 (65.22%), Query Frame = -3 Query: 280 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKA 486 DWV GT G V+MG+ +G Y +P V++ FPVT NG++ IV+G IDE+ + K+ +T +E E+A Sbjct: 255 DWVLGT-NGKIVTMGIPSNGEYGIPKDVMFGFPVTTENGKYKIVEGLEIDEYSQGKIKITLDELEGERA 322
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_LEPCP (Malate dehydrogenase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=mdh PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.645e-11 Identity = 30/68 (44.12%), Postives = 41/68 (60.29%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DW GT G WV+MGV G Y +PA ++ +PVTC GE+ IV+G ID F ++ ++ T E EK Sbjct: 255 DWALGT-NGAWVTMGVPSKGEYGIPAETMFGYPVTCEGGEYKIVEGLPIDAFSQECINKTLAELEGEK 321
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_CUPTR (Malate dehydrogenase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=mdh PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.645e-11 Identity = 29/69 (42.03%), Postives = 47/69 (68.12%), Query Frame = -3 Query: 280 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKA 486 DWV G+ G V+MG+ +G Y +PA ++ +PVT NG++ IV+G ID + ++K+++T +E EEKA Sbjct: 253 DWVLGS-NGKVVTMGIPSNGEYGIPADTMFGYPVTTANGKYEIVKGLEIDAYSQEKINITLKELEEEKA 320
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH2_BURTA (Malate dehydrogenase 2 OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=mdh2 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 8.645e-11 Identity = 29/67 (43.28%), Postives = 42/67 (62.69%), Query Frame = -3 Query: 286 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEE 486 DW+FG+ +G WVSM V DGSY + G+++ PV C G + V+ ID F R+++DL+ E EE Sbjct: 253 DWIFGS-DGRWVSMSVPSDGSYGIAPGLMFGVPVICDGGRYERVKDIGIDAFARQRIDLSVRELQEE 318 The following BLAST results are available for this feature:
BLAST of CF835868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835868 ID=CF835868; Name=CF835868; organism=Citrus sinensis; type=EST; length=488bpback to top |