CF835868
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_ALHEH (Malate dehydrogenase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=mdh PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 2.124e-17 Identity = 38/68 (55.88%), Postives = 47/68 (69.12%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DWV GTPEG W SM V DGSY + G+IYS+P CRNG++ IVQ IDEF R+K+ T +E EE+ Sbjct: 251 DWVLGTPEGEWTSMAVPSDGSYGIEKGIIYSYPCVCRNGDYEIVQDLEIDEFSREKMQATEKELVEER 318
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_THETH (Malate dehydrogenase OS=Thermus thermophilus GN=mdh PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.181e-17 Identity = 34/67 (50.75%), Postives = 49/67 (73.13%), Query Frame = -3 Query: 286 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEE 486 DW GTPEG WVSM V G Y +P G++YSFPVT ++G + +V+G I+EF RK++++TA+E +E Sbjct: 251 DWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDE 317
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_THET8 (Malate dehydrogenase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=mdh PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.181e-17 Identity = 34/67 (50.75%), Postives = 49/67 (73.13%), Query Frame = -3 Query: 286 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEE 486 DW GTPEG WVSM V G Y +P G++YSFPVT ++G + +V+G I+EF RK++++TA+E +E Sbjct: 251 DWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDE 317
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_THET2 (Malate dehydrogenase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=mdh PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.181e-17 Identity = 34/67 (50.75%), Postives = 49/67 (73.13%), Query Frame = -3 Query: 286 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEE 486 DW GTPEG WVSM V G Y +P G++YSFPVT ++G + +V+G I+EF RK++++TA+E +E Sbjct: 251 DWALGTPEGDWVSMAVPSQGEYGIPEGIVYSFPVTAKDGAYRVVEGLEINEFARKRMEITAQELLDE 317
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_THEFY (Malate dehydrogenase OS=Thermobifida fusca (strain YX) GN=mdh PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 8.072e-17 Identity = 37/68 (54.41%), Postives = 47/68 (69.12%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DWV GTPEG W S+ + DGSY VP G++ SFPV RNG W IVQG I+EF R+++D + E EE+ Sbjct: 253 DWVNGTPEGDWTSVALPSDGSYGVPEGLVSSFPVVSRNGSWEIVQGLEINEFSRERIDASVRELEEER 320
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_NOCSJ (Malate dehydrogenase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=mdh PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.377e-16 Identity = 36/68 (52.94%), Postives = 49/68 (72.06%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DW+FG+ + WVSM V DGSY VP G+I SFPVT ++G+W IVQG ID+F R K+D + E ++E+ Sbjct: 252 DWLFGSADADWVSMAVVSDGSYGVPEGLISSFPVTTKDGDWEIVQGLEIDDFSRAKIDASTAELADER 319
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_ACIAD (Malate dehydrogenase OS=Acinetobacter sp. (strain ADP1) GN=mdh PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.377e-16 Identity = 38/69 (55.07%), Postives = 48/69 (69.57%), Query Frame = -3 Query: 280 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKA 486 DW GT G WV+MG+ DGSY +P GVIY PVTC NGE+ V+G IDEF R+++D T +E EE+A Sbjct: 254 DWALGT-NGKWVTMGIPSDGSYGIPEGVIYGVPVTCENGEYKRVEGLEIDEFSRERMDKTLQELEEERA 321
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_MYCTU (Malate dehydrogenase OS=Mycobacterium tuberculosis GN=mdh PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.798e-16 Identity = 37/69 (53.62%), Postives = 47/69 (68.12%), Query Frame = -3 Query: 280 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKA 486 DW+ GTP WVSM V DGSY VP G+I SFPVT + G WTIV G IDEF R ++D + E ++E++ Sbjct: 253 DWLLGTPADDWVSMAVVSDGSYGVPEGLISSFPVTTKGGNWTIVSGLEIDEFSRGRIDKSTAELADERS 321
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_MYCTA (Malate dehydrogenase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=mdh PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.798e-16 Identity = 37/69 (53.62%), Postives = 47/69 (68.12%), Query Frame = -3 Query: 280 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKA 486 DW+ GTP WVSM V DGSY VP G+I SFPVT + G WTIV G IDEF R ++D + E ++E++ Sbjct: 253 DWLLGTPADDWVSMAVVSDGSYGVPEGLISSFPVTTKGGNWTIVSGLEIDEFSRGRIDKSTAELADERS 321
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_MYCBT (Malate dehydrogenase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=mdh PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.798e-16 Identity = 37/69 (53.62%), Postives = 47/69 (68.12%), Query Frame = -3 Query: 280 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKA 486 DW+ GTP WVSM V DGSY VP G+I SFPVT + G WTIV G IDEF R ++D + E ++E++ Sbjct: 253 DWLLGTPADDWVSMAVVSDGSYGVPEGLISSFPVTTKGGNWTIVSGLEIDEFSRGRIDKSTAELADERS 321 The following BLAST results are available for this feature:
BLAST of CF835868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835868 ID=CF835868; Name=CF835868; organism=Citrus sinensis; type=EST; length=488bpback to top |