CF835868
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_CHRVO (Malate dehydrogenase OS=Chromobacterium violaceum GN=mdh PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 6.834e-16 Identity = 38/69 (55.07%), Postives = 47/69 (68.12%), Query Frame = -3 Query: 280 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKA 486 DWV GT G WV+MGV DGSY +P GV+Y PV C NGE+ V+G ID F R+++DLT E EE+A Sbjct: 252 DWVLGT-NGKWVTMGVPSDGSYGIPEGVMYGVPVVCENGEYKRVEGLEIDAFSRERMDLTLAELEEERA 319
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDHC_PIG (Malate dehydrogenase, cytoplasmic OS=Sus scrofa GN=MDH1 PE=1 SV=4) HSP 1 Score: 82.8037 bits (203), Expect = 8.925e-16 Identity = 39/70 (55.71%), Postives = 53/70 (75.71%), Query Frame = -3 Query: 271 FGTPEGTWVSMGVYFDG-SYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKALAY 477 FGTPEG +VSMG+ DG SY VP ++YSFPVT ++ W IV+G I++F R+K+DLTA+E +EEK A+ Sbjct: 259 FGTPEGEFVSMGIISDGNSYGVPDDLLYSFPVTIKDKTWKIVEGLPINDFSREKMDLTAKELAEEKETAF 328
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_STRGG (Malate dehydrogenase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=mdh PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.166e-15 Identity = 36/67 (53.73%), Postives = 49/67 (73.13%), Query Frame = -3 Query: 283 WVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 483 WV GT EG W SMG+ DGSY VP G+I SFPVT ++G++ IVQG I+EF R ++D + +E +EE+ Sbjct: 254 WVNGTAEGDWTSMGIPSDGSYGVPEGIISSFPVTTKDGKYEIVQGLDINEFSRTRIDASVKELTEER 320
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDHC_BOVIN (Malate dehydrogenase, cytoplasmic OS=Bos taurus GN=MDH1 PE=2 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 1.522e-15 Identity = 37/70 (52.86%), Postives = 53/70 (75.71%), Query Frame = -3 Query: 271 FGTPEGTWVSMGVYFDG-SYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKALAY 477 FGTPEG +VSMG+ DG SY +P ++YSFPVT ++ W +V+G I++F R+K+DLTA+E +EEK A+ Sbjct: 259 FGTPEGEFVSMGIISDGNSYGIPDDLLYSFPVTIKDKTWKVVEGLPINDFSREKMDLTAKELAEEKETAF 328
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_LARHH (Malate dehydrogenase OS=Laribacter hongkongensis (strain HLHK9) GN=mdh PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.988e-15 Identity = 37/68 (54.41%), Postives = 47/68 (69.12%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DWV GT G WV+MG+ DGSY +P GV Y FPVTC++G++ IVQG IDEF R ++ T E EE+ Sbjct: 255 DWVLGT-NGKWVTMGIPSDGSYGIPEGVTYGFPVTCKDGKYEIVQGLEIDEFSRACMNKTLAELEEER 321
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDHC_XENLA (Malate dehydrogenase, cytoplasmic OS=Xenopus laevis GN=mdh1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.988e-15 Identity = 38/70 (54.29%), Postives = 52/70 (74.29%), Query Frame = -3 Query: 271 FGTPEGTWVSMGVYFDG-SYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKALAY 477 FGTPEG +VSMGV DG SY VP ++YSFP+T +N W IV+G I++F R+K+D+TA+E +EK A+ Sbjct: 259 FGTPEGQFVSMGVISDGNSYGVPEDLMYSFPLTIKNKTWKIVEGLCINDFSREKMDITAKELQDEKETAF 328
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDHC_RAT (Malate dehydrogenase, cytoplasmic OS=Rattus norvegicus GN=Mdh1 PE=1 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 1.988e-15 Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = -3 Query: 271 FGTPEGTWVSMGVYFDG-SYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKALAY 477 FGTPEG +VSMGV DG SY VP ++YSFPV +N W V+G I++F R+K+DLTA+E +EEK A+ Sbjct: 259 FGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVEGLPINDFSREKMDLTAKELTEEKETAF 328
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDHC_MOUSE (Malate dehydrogenase, cytoplasmic OS=Mus musculus GN=Mdh1 PE=1 SV=3) HSP 1 Score: 81.6481 bits (200), Expect = 1.988e-15 Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = -3 Query: 271 FGTPEGTWVSMGVYFDG-SYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKALAY 477 FGTPEG +VSMGV DG SY VP ++YSFPV +N W V+G I++F R+K+DLTA+E +EEK A+ Sbjct: 259 FGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVEGLPINDFSREKMDLTAKELTEEKETAF 328
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_NOCFA (Malate dehydrogenase OS=Nocardia farcinica GN=mdh PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.597e-15 Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DWV GTP G W SM V DGSY VP G+I SFPVTC +G + IV+G +D F R+++D + E + E+ Sbjct: 256 DWVLGTPAGEWTSMAVPSDGSYGVPDGLISSFPVTCADGAYRIVEGLEVDAFSRERIDASVAELTAER 323
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDHC_HUMAN (Malate dehydrogenase, cytoplasmic OS=Homo sapiens GN=MDH1 PE=1 SV=4) HSP 1 Score: 81.2629 bits (199), Expect = 2.597e-15 Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = -3 Query: 271 FGTPEGTWVSMGVYFDG-SYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKALAY 477 FGTPEG +VSMGV DG SY VP ++YSFPV +N W V+G I++F R+K+DLTA+E +EEK A+ Sbjct: 259 FGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVEGLPINDFSREKMDLTAKELTEEKESAF 328 The following BLAST results are available for this feature:
BLAST of CF835868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835868 ID=CF835868; Name=CF835868; organism=Citrus sinensis; type=EST; length=488bpback to top |