CF835868
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_PSYA2 (Malate dehydrogenase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=mdh PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.392e-15 Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = -3 Query: 283 WVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDE-FLRKKLDLTAEEFSEEK 483 WV GT E WVSMGVY +G Y + G+IYSFP TC NG+W+IV G + F ++K+ T +E SEE+ Sbjct: 254 WVLGTDENDWVSMGVYSNGEYGIAKGLIYSFPCTCTNGDWSIVDGVDVSSAFSKEKMAATEQELSEER 321
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_POLSQ (Malate dehydrogenase OS=Polynucleobacter sp. (strain QLW-P1DMWA-1) GN=mdh PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.429e-15 Identity = 36/69 (52.17%), Postives = 47/69 (68.12%), Query Frame = -3 Query: 280 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKA 486 DWV GT G WV+MG+ G Y +PA VIY FPVTC NGE+ +++G IDEF R+++ T E EE+A Sbjct: 255 DWVLGT-NGKWVTMGIPSKGEYGIPAEVIYGFPVTCENGEYKMIEGLEIDEFSRERMTHTLNELLEEQA 322
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDHC_XENTR (Malate dehydrogenase, cytoplasmic OS=Xenopus tropicalis GN=mdh1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.429e-15 Identity = 38/69 (55.07%), Postives = 51/69 (73.91%), Query Frame = -3 Query: 274 FGTPEGTWVSMGVYFDG-SYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKALA 477 FGTP+G +VSMGV DG SY +P ++YSFP+T +N W IV+G I++F R+K+DLTA+E EEK A Sbjct: 259 FGTPDGQFVSMGVISDGNSYGIPEDLMYSFPLTIKNKTWKIVEGLPINDFSREKMDLTAKELHEEKETA 327
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_NITEC (Malate dehydrogenase OS=Nitrosomonas eutropha (strain C91) GN=mdh PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.785e-15 Identity = 34/67 (50.75%), Postives = 44/67 (65.67%), Query Frame = -3 Query: 286 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEE 486 +W FGT +G W +MG+ DGSY +P GVIY FPV C+NG IVQG I+ F R +LD E ++E Sbjct: 252 NWFFGTADGDWTTMGILSDGSYEIPEGVIYGFPVICKNGMREIVQGLEINPFSRTRLDAAYNELTQE 318
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_STRAW (Malate dehydrogenase OS=Streptomyces avermitilis GN=mdh PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.556e-15 Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = -3 Query: 283 WVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 483 WV GT +G W SMG+ DGSY VP G+I SFPVT ++G + IVQG I+EF R ++D + +E EE+ Sbjct: 254 WVNGTADGDWTSMGIPSDGSYGVPEGLISSFPVTTKDGRYEIVQGLEINEFSRARIDASVKELEEER 320
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_BURXL (Malate dehydrogenase OS=Burkholderia xenovorans (strain LB400) GN=mdh PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.556e-15 Identity = 36/68 (52.94%), Postives = 46/68 (67.65%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DWV GT G WV+MG+ DGSY +P +IY PVTC NGE+ V+G ID F R+K+D T +E EE+ Sbjct: 253 DWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLQELLEER 319
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_BURM1 (Malate dehydrogenase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=mdh PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.556e-15 Identity = 36/68 (52.94%), Postives = 45/68 (66.18%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DWV GT G WV+MG+ DGSY +P +IY PVTC NGE+ V+G ID F R+K+D T E EE+ Sbjct: 253 DWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDATLAELLEER 319
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_BORA1 (Malate dehydrogenase OS=Bordetella avium (strain 197N) GN=mdh PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.556e-15 Identity = 34/68 (50.00%), Postives = 48/68 (70.59%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DWV G+ G WV+MG+ DGSY +P G+IY FPVT NGE+T+V+ +D F R+++D T +E EE+ Sbjct: 255 DWVLGS-NGKWVTMGIPSDGSYGIPEGIIYGFPVTTANGEYTMVKDLEVDAFSRERMDFTLKELLEER 321
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_AQUAR (Malate dehydrogenase OS=Aquaspirillum arcticum GN=mdh PE=1 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 7.556e-15 Identity = 36/68 (52.94%), Postives = 48/68 (70.59%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DWV GT G W +MG+ DGSY +P GVI+ FPVT NGE+ IVQG SID F ++++++T E EE+ Sbjct: 255 DWVLGTA-GKWTTMGIPSDGSYGIPEGVIFGFPVTTENGEYKIVQGLSIDAFSQERINVTLNELLEEQ 321
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_DECAR (Malate dehydrogenase OS=Dechloromonas aromatica (strain RCB) GN=mdh PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 9.868e-15 Identity = 32/67 (47.76%), Postives = 50/67 (74.63%), Query Frame = -3 Query: 286 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEE 486 DWV G+ E WV+MGV DGSY +PAG+++ FP C+ G+++I+QG IDE+ R+K++ T +E ++E Sbjct: 256 DWVLGSDE--WVTMGVPSDGSYGIPAGIVFGFPCECKGGKFSIIQGLEIDEYSREKINFTLKELTDE 320 The following BLAST results are available for this feature:
BLAST of CF835868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835868 ID=CF835868; Name=CF835868; organism=Citrus sinensis; type=EST; length=488bpback to top |