CF835868
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_POLNS (Malate dehydrogenase OS=Polynucleobacter necessarius (strain STIR1) GN=mdh PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.289e-14 Identity = 35/69 (50.72%), Postives = 47/69 (68.12%), Query Frame = -3 Query: 280 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKA 486 DWV GT G WV+MG+ G Y++PA VIY FPV C NGE+ +++G IDEF R+++ T E EE+A Sbjct: 255 DWVLGT-NGKWVTMGIPSKGEYDIPAEVIYGFPVVCENGEYKMIEGLEIDEFSRERMTHTLNELLEEQA 322
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_HERAR (Malate dehydrogenase OS=Herminiimonas arsenicoxydans GN=mdh PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.289e-14 Identity = 35/68 (51.47%), Postives = 48/68 (70.59%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DWV GT G WV+MG+ DGSY +P ++ FPVT NGE+ IVQG ID F +++++LT +E SEE+ Sbjct: 255 DWVLGT-NGKWVTMGIPSDGSYGIPKDTMFGFPVTTENGEYKIVQGLEIDAFSQERINLTLKELSEER 321
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_FRAAA (Malate dehydrogenase OS=Frankia alni (strain ACN14a) GN=mdh PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.289e-14 Identity = 35/67 (52.24%), Postives = 45/67 (67.16%), Query Frame = -3 Query: 283 WVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 483 WV GTPEG W S + DGSY VP G+I SFPVT G++ IVQG +D F R+K+D + E +EE+ Sbjct: 254 WVNGTPEGDWTSAAIPSDGSYGVPEGLISSFPVTAAGGKFEIVQGLELDAFSREKIDASVRELAEER 320
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_BURPP (Malate dehydrogenase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=mdh PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.289e-14 Identity = 36/68 (52.94%), Postives = 45/68 (66.18%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DWV GT G WV+MG+ DGSY +P +IY PVTC NGE+ V+G ID F R+K+D T E EE+ Sbjct: 253 DWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLNELLEER 319
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_XANC5 (Malate dehydrogenase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=mdh PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.683e-14 Identity = 36/69 (52.17%), Postives = 48/69 (69.57%), Query Frame = -3 Query: 280 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKA 486 DWV GT G WV+MGV DGSY +P GV++ FPVT NG++TIV+ ID+F +K +D T E EE++ Sbjct: 254 DWVLGT-NGKWVTMGVPSDGSYGIPEGVMFGFPVTTENGKYTIVKDLPIDDFSQKYIDKTLAELEEERS 321
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_XANAC (Malate dehydrogenase OS=Xanthomonas axonopodis pv. citri GN=mdh PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.683e-14 Identity = 36/69 (52.17%), Postives = 48/69 (69.57%), Query Frame = -3 Query: 280 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEKA 486 DWV GT G WV+MGV DGSY +P GV++ FPVT NG++TIV+ ID+F +K +D T E EE++ Sbjct: 254 DWVLGT-SGKWVTMGVPSDGSYGIPEGVMFGFPVTTENGKYTIVKDLPIDDFSQKYIDKTLAELEEERS 321
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_PSYWF (Malate dehydrogenase OS=Psychrobacter sp. (strain PRwf-1) GN=mdh PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.683e-14 Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = -3 Query: 283 WVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGF-SIDEFLRKKLDLTAEEFSEEK 483 W GT E WVSMGVY G Y + G+IYSFP TC NG+W IV+G + +F ++K+ T +E SEE+ Sbjct: 252 WALGTDENDWVSMGVYSQGEYGIAKGLIYSFPCTCSNGDWKIVEGLDTSSDFSQEKMKATEQELSEER 319
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_BURCJ (Malate dehydrogenase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=mdh PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.683e-14 Identity = 36/68 (52.94%), Postives = 45/68 (66.18%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DWV GT G WV+MG+ DGSY +P +IY PVTC NGE+ V+G ID F R+K+D T E EE+ Sbjct: 253 DWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLAELLEER 319
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_BURCH (Malate dehydrogenase OS=Burkholderia cenocepacia (strain HI2424) GN=mdh PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.683e-14 Identity = 36/68 (52.94%), Postives = 45/68 (66.18%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DWV GT G WV+MG+ DGSY +P +IY PVTC NGE+ V+G ID F R+K+D T E EE+ Sbjct: 253 DWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLAELLEER 319
BLAST of CF835868 vs. ExPASy Swiss-Prot
Match: MDH_BURCC (Malate dehydrogenase OS=Burkholderia cenocepacia (strain MC0-3) GN=mdh PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 1.683e-14 Identity = 36/68 (52.94%), Postives = 45/68 (66.18%), Query Frame = -3 Query: 283 DWVFGTPEGTWVSMGVYFDGSYNVPAGVIYSFPVTCRNGEWTIVQGFSIDEFLRKKLDLTAEEFSEEK 486 DWV GT G WV+MG+ DGSY +P +IY PVTC NGE+ V+G ID F R+K+D T E EE+ Sbjct: 253 DWVLGT-NGKWVTMGIPSDGSYGIPEDIIYGVPVTCENGEYKRVEGLEIDAFSREKMDGTLAELLEER 319 The following BLAST results are available for this feature:
BLAST of CF835868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 139
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835868 ID=CF835868; Name=CF835868; organism=Citrus sinensis; type=EST; length=488bpback to top |