CF836005
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS15A_DROME (40S ribosomal protein S15Aa OS=Drosophila melanogaster GN=RpS15Aa PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 2.621e-24 Identity = 56/74 (75.68%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CGV 284 MV ++VL DALK + NAEKRGKRQV++ P SKVIIKFL VM KHGYIGEFE VDDHR+GKIVV L GRLN CGV Sbjct: 1 MVRMNVLADALKCINNAEKRGKRQVLLRPCSKVIIKFLTVMMKHGYIGEFEIVDDHRSGKIVVNLTGRLNKCGV 74
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS15B_DROME (40S ribosomal protein S15Ab OS=Drosophila melanogaster GN=RpS15Ab PE=2 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 3.423e-24 Identity = 56/74 (75.68%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CGV 284 MV ++VL DALK + NAEKRGKRQV++ P SKVIIKFL VM KHGYIGEFE V+DHRAGKIVV L GRLN CGV Sbjct: 1 MVRMNVLADALKCINNAEKRGKRQVLLRPCSKVIIKFLTVMMKHGYIGEFEIVEDHRAGKIVVNLTGRLNKCGV 74
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS15A_STRPU (40S ribosomal protein S15a OS=Strongylocentrotus purpuratus GN=RPS15A PE=2 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 7.626e-24 Identity = 54/74 (72.97%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CGV 284 MV ++VL DAL+S+ NAEKR KRQV+I P SKV +KFL+VM KHGYIGEFE VDDHR GKI+V LNGRLN CGV Sbjct: 1 MVRMNVLADALRSICNAEKRCKRQVLIRPCSKVTVKFLMVMMKHGYIGEFEIVDDHRGGKIIVNLNGRLNKCGV 74
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS15A_ICTPU (40S ribosomal protein S15a OS=Ictalurus punctatus GN=rps15a PE=2 SV=3) HSP 1 Score: 108.227 bits (269), Expect = 1.301e-23 Identity = 54/74 (72.97%), Postives = 61/74 (82.43%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CGV 284 MV ++VL DALK + NAEKRGK QV+I P SKVI++FL VM KHGYIGEFE +DDHRAGKIVV L GRLN CGV Sbjct: 1 MVRMNVLADALKCINNAEKRGKAQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGV 74
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS22_SCHPO (40S ribosomal protein S22 OS=Schizosaccharomyces pombe GN=rps22a PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 4.943e-23 Identity = 51/74 (68.92%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CGV 284 MV SVL D L ++ NAE+RG+RQV+I PSSKVI+KFL VMQKHGYI EF +DDHR+GKIV++LNGR+N CGV Sbjct: 1 MVRQSVLADCLNNIVNAERRGRRQVLIRPSSKVIVKFLTVMQKHGYIDEFTEIDDHRSGKIVIQLNGRINKCGV 74
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS15A_DICDI (40S ribosomal protein S15a OS=Dictyostelium discoideum GN=rps15a PE=2 SV=3) HSP 1 Score: 104.76 bits (260), Expect = 1.438e-22 Identity = 51/74 (68.92%), Postives = 62/74 (83.78%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CGV 284 MV +SVLND L S+ NAE++GKRQV++ PSSKVI+KFL VM K YIGEFE VDDHR+GKIV++L GR+N CGV Sbjct: 1 MVRISVLNDCLNSIVNAERQGKRQVLVRPSSKVIVKFLEVMMKKRYIGEFEIVDDHRSGKIVIDLIGRINKCGV 74
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS15A_PARLI (40S ribosomal protein S15a OS=Paracentrotus lividus GN=RPS15A PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 4.185e-22 Identity = 53/74 (71.62%), Postives = 60/74 (81.08%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CGV 284 MV ++VL AL+ + NAEKR KRQV+I P SKV IKFL+VM KHGYIGEFE VDDHR GKI+V LNGRLN CGV Sbjct: 1 MVRMNVLAAALRCICNAEKRCKRQVLIRPCSKVTIKFLMVMIKHGYIGEFEVVDDHRGGKIIVNLNGRLNKCGV 74
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_METS5 (30S ribosomal protein S8P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rps8p PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.253e-18 Identity = 41/73 (56.16%), Postives = 56/73 (76.71%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CG 281 M +++ L++AL S+YN E R +Q +I PSSK+I+ L VMQK GY+GEFEY+DD R GKI+V+L GR+N CG Sbjct: 1 MTVINTLSNALSSLYNNEMRRNKQAIIMPSSKLIVNVLRVMQKEGYVGEFEYIDDGRWGKILVQLMGRINKCG 73
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_SULAC (30S ribosomal protein S8P OS=Sulfolobus acidocaldarius GN=rps8p PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.294e-17 Identity = 42/73 (57.53%), Postives = 55/73 (75.34%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CG 281 M ++ L +AL ++YN E R +Q +I P+SK+II L VMQK GYIGEFEY+DD RAGKI+V+L GR+N CG Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGKIIVQLLGRINKCG 73
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_SULSO (30S ribosomal protein S8P OS=Sulfolobus solfataricus GN=rps8p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.179e-16 Identity = 42/73 (57.53%), Postives = 54/73 (73.97%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CG 281 MV V+ L +AL S+YN E R +Q +I P+SK++I L VMQK GY+GEFEY+DD R GKI V+L GR+N CG Sbjct: 1 MVFVNPLANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCG 73 The following BLAST results are available for this feature:
BLAST of CF836005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836005 ID=CF836005; Name=CF836005; organism=Citrus sinensis; type=EST; length=284bpback to top |