CF836005
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: R15A1_ARATH (40S ribosomal protein S15a-1 OS=Arabidopsis thaliana GN=RPS15AA PE=2 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 3.415e-32 Identity = 68/74 (91.89%), Postives = 71/74 (95.95%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CGV 284 MV +SVLNDALKSMYNAEKRGKRQVMI PSSKVIIKFL+VMQKHGYIGEFEYVDDHR+GKIVVELNGRLN CGV Sbjct: 1 MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGV 74
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS15A_DAUCA (40S ribosomal protein S15a OS=Daucus carota GN=RPS15A PE=2 SV=3) HSP 1 Score: 135.191 bits (339), Expect = 9.937e-32 Identity = 67/74 (90.54%), Postives = 71/74 (95.95%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CGV 284 MV VSVLNDALKSM+NAEKRGKRQVMI PSSKV+IKFL+VMQKHGYIGEFEYVDDHR+GKIVVELNGRLN CGV Sbjct: 1 MVRVSVLNDALKSMFNAEKRGKRQVMIRPSSKVVIKFLMVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGV 74
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS15A_BRANA (40S ribosomal protein S15a OS=Brassica napus GN=RPS15A PE=2 SV=3) HSP 1 Score: 135.191 bits (339), Expect = 9.937e-32 Identity = 67/74 (90.54%), Postives = 71/74 (95.95%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CGV 284 MV +SVLNDALKSM+NAEKRGKRQVMI PSSKVIIKFL+VMQKHGYIGEFEYVDDHR+GKIVVELNGRLN CGV Sbjct: 1 MVRISVLNDALKSMFNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGV 74
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: R15A4_ARATH (40S ribosomal protein S15a-4 OS=Arabidopsis thaliana GN=RPS15AD PE=2 SV=3) HSP 1 Score: 135.191 bits (339), Expect = 9.937e-32 Identity = 67/74 (90.54%), Postives = 70/74 (94.59%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CGV 284 MV +SVLND LKSMYNAEKRGKRQVMI PSSKVIIKFL+VMQKHGYIGEFEYVDDHR+GKIVVELNGRLN CGV Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGV 74
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: R15A3_ARATH (40S ribosomal protein S15a-3 OS=Arabidopsis thaliana GN=RPS15AC PE=2 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 7.874e-29 Identity = 64/74 (86.49%), Postives = 66/74 (89.19%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CGV 284 MV SVLND LKSM NAEK+GKRQVMI PSSKVIIKFL VMQKHGYI EFEYVDDHR+GKIVVELNGRLN CGV Sbjct: 1 MVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGKIVVELNGRLNNCGV 74
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS22_CANAL (40S ribosomal protein S22 OS=Candida albicans GN=RPS22A PE=3 SV=3) HSP 1 Score: 116.701 bits (291), Expect = 3.657e-26 Identity = 58/74 (78.38%), Postives = 64/74 (86.49%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CGV 284 M SVL DAL ++ NAEK GKRQV+I PSSKVIIKFL VMQKHGYIGEFEY+DDHR+GKIVV+LNGRLN CGV Sbjct: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLTVMQKHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGV 74
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS22_NEUCR (40S ribosomal protein S22 OS=Neurospora crassa GN=rps-22 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.777e-26 Identity = 59/74 (79.73%), Postives = 65/74 (87.84%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CGV 284 MV SVL+DAL S+ NAEK GKRQV+I PSSKVIIKFL VMQKHGYIGEFE VDDHR+GKIVV+LNGR+N CGV Sbjct: 1 MVRTSVLHDALNSINNAEKAGKRQVLIRPSSKVIIKFLQVMQKHGYIGEFEEVDDHRSGKIVVQLNGRMNKCGV 74
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS22_KLUMA (40S ribosomal protein S22 OS=Kluyveromyces marxianus GN=RPS22 PE=3 SV=3) HSP 1 Score: 116.316 bits (290), Expect = 4.777e-26 Identity = 58/74 (78.38%), Postives = 64/74 (86.49%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CGV 284 M SVL DAL ++ NAEK GKRQV+I PSSKVIIKFL VMQKHGYIGEFEY+DDHR+GKIVV+LNGRLN CGV Sbjct: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGV 74
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS22_KLULA (40S ribosomal protein S22 OS=Kluyveromyces lactis GN=RPS22 PE=3 SV=3) HSP 1 Score: 116.316 bits (290), Expect = 4.777e-26 Identity = 58/74 (78.38%), Postives = 64/74 (86.49%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CGV 284 M SVL DAL ++ NAEK GKRQV+I PSSKVIIKFL VMQKHGYIGEFEY+DDHR+GKIVV+LNGRLN CGV Sbjct: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGV 74
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS22A_YEAST (40S ribosomal protein S22-A OS=Saccharomyces cerevisiae GN=RPS22A PE=1 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 8.148e-26 Identity = 57/70 (81.43%), Postives = 63/70 (90.00%), Query Frame = 3 Query: 75 SVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CGV 284 SVL DAL ++ NAEK GKRQV+I PSSKVIIKFL VMQKHGYIGEFEY+DDHR+GKIVV+LNGRLN CGV Sbjct: 5 SVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGV 74 The following BLAST results are available for this feature:
BLAST of CF836005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF836005 ID=CF836005; Name=CF836005; organism=Citrus sinensis; type=EST; length=284bpback to top |