CF836005
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_SULIY (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rps8p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.179e-16 Identity = 42/73 (57.53%), Postives = 54/73 (73.97%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CG 281 MV V+ L +AL S+YN E R +Q +I P+SK++I L VMQK GY+GEFEY+DD R GKI V+L GR+N CG Sbjct: 1 MVFVNPLANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCG 73
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_SULIN (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rps8p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.179e-16 Identity = 42/73 (57.53%), Postives = 54/73 (73.97%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CG 281 MV V+ L +AL S+YN E R +Q +I P+SK++I L VMQK GY+GEFEY+DD R GKI V+L GR+N CG Sbjct: 1 MVFVNPLANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCG 73
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_SULIM (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rps8p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.179e-16 Identity = 42/73 (57.53%), Postives = 54/73 (73.97%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CG 281 MV V+ L +AL S+YN E R +Q +I P+SK++I L VMQK GY+GEFEY+DD R GKI V+L GR+N CG Sbjct: 1 MVFVNPLANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCG 73
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_SULIL (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rps8p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.179e-16 Identity = 42/73 (57.53%), Postives = 54/73 (73.97%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CG 281 MV V+ L +AL S+YN E R +Q +I P+SK++I L VMQK GY+GEFEY+DD R GKI V+L GR+N CG Sbjct: 1 MVFVNPLANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCG 73
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_SULIK (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rps8p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.179e-16 Identity = 42/73 (57.53%), Postives = 54/73 (73.97%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CG 281 MV V+ L +AL S+YN E R +Q +I P+SK++I L VMQK GY+GEFEY+DD R GKI V+L GR+N CG Sbjct: 1 MVFVNPLANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCG 73
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_SULIA (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain M.16.27) GN=rps8p PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.179e-16 Identity = 42/73 (57.53%), Postives = 54/73 (73.97%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CG 281 MV V+ L +AL S+YN E R +Q +I P+SK++I L VMQK GY+GEFEY+DD R GKI V+L GR+N CG Sbjct: 1 MVFVNPLANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCG 73
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_CALMQ (30S ribosomal protein S8P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rps8p PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.012e-16 Identity = 44/73 (60.27%), Postives = 56/73 (76.71%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CG 281 MV++ VL++AL S+ NAE RG RQV+I PSSK+I L VMQ++GY+GEFEYV D R GK VV+L GR+N G Sbjct: 1 MVMLDVLSNALMSVKNAESRGDRQVIIWPSSKLIGNVLRVMQRYGYVGEFEYVYDGRGGKYVVQLLGRINDIG 73
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_SULTO (30S ribosomal protein S8P OS=Sulfolobus tokodaii GN=rps8p PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.853e-16 Identity = 41/73 (56.16%), Postives = 55/73 (75.34%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CG 281 MV ++ L +AL ++YN E R +Q +I P+SK+II L MQK GYIGEFE++DD R+GKIVV+L GR+N CG Sbjct: 1 MVNLNPLANALTTIYNNEMRRNKQAIIMPASKLIINVLRAMQKEGYIGEFEFIDDGRSGKIVVQLLGRINKCG 73
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_IGNH4 (30S ribosomal protein S8P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps8p PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.304e-15 Identity = 39/73 (53.42%), Postives = 53/73 (72.60%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CG 281 MV++ L +AL ++YN E RG ++ +I P+SK+I L +MQK GY+GEFEY+DD R GKI V L GR+N CG Sbjct: 1 MVMLDTLANALTTIYNNEVRGNKEAIIMPASKLIANVLRIMQKEGYVGEFEYIDDGRWGKIRVRLLGRINKCG 73
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_DESK1 (30S ribosomal protein S8P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rps8p PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.304e-15 Identity = 38/74 (51.35%), Postives = 56/74 (75.68%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CGV 284 MV++ L +AL ++YNAE R K++V++ P+SK+ + L V+Q+ GYIGEFEY+DD R GKI ++L GR+N GV Sbjct: 1 MVVMDTLANALSAIYNAEIRAKKEVVVWPASKLTLNVLKVLQREGYIGEFEYIDDGRWGKIKIQLLGRINKIGV 74 The following BLAST results are available for this feature:
BLAST of CF836005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF836005 ID=CF836005; Name=CF836005; organism=Citrus sinensis; type=EST; length=284bpback to top |