CF836005
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_AERPE (30S ribosomal protein S8P OS=Aeropyrum pernix GN=rps8p PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 3.551e-13 Identity = 37/74 (50.00%), Postives = 52/74 (70.27%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CGV 284 MV++ L +A+ ++ NAE RGK + +I PSSK+I L +++K GYIG FEY+DD R GK V+L GR+N GV Sbjct: 1 MVMLDTLANAMAAIKNAEMRGKGEAIIMPSSKLIANVLRILEKEGYIGGFEYIDDGRWGKFRVKLLGRINDIGV 74
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_PYRAR (30S ribosomal protein S8P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rps8p PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.637e-13 Identity = 36/73 (49.32%), Postives = 52/73 (71.23%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CG 281 MV++ +L++AL + NAE GKRQV I P +K+ L V+Q++GY+GE EYVDD R GK +V+L G++N G Sbjct: 1 MVMLDILSNALIQIKNAEVMGKRQVTIWPVNKLTYYTLRVLQRYGYVGEIEYVDDGRGGKYIVQLLGKINDIG 73
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_PYRAB (30S ribosomal protein S8P OS=Pyrococcus abyssi GN=rps8p PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.057e-13 Identity = 37/73 (50.68%), Postives = 53/73 (72.60%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CG 281 M ++ L +AL + N+E+ GKR+V I P+SK+I + L VMQK+GYIGEFE++DD RAG V+L G++N G Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGVYRVQLLGKINKAG 73
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_THEPD (30S ribosomal protein S8P OS=Thermofilum pendens (strain Hrk 5) GN=rps8p PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 7.910e-13 Identity = 36/73 (49.32%), Postives = 52/73 (71.23%), Query Frame = 3 Query: 66 VIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CGV 284 +++ L +AL ++ N E RGK+Q +I PSSK+I+ L +++ GYIG+FE +DD R GKIVV L GR+N GV Sbjct: 1 MMLDTLANALSTIMNNEVRGKKQCVIYPSSKLIVAVLDTLKRSGYIGDFELIDDGRGGKIVVNLLGRINKIGV 73
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_UNCMA (30S ribosomal protein S8P OS=Uncultured methanogenic archaeon RC-I GN=rps8p PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.033e-12 Identity = 36/74 (48.65%), Postives = 52/74 (70.27%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CGV 284 MV++ L +AL + NAE GK +I P+SK+I L VMQ GY+GEFE+VD+ +AG++ V+L G++N CGV Sbjct: 1 MVLMDPLANALSVIKNAETTGKTDCVIDPASKIIGNVLKVMQDQGYVGEFEFVDNGKAGQLKVKLIGKINKCGV 74
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: R15A2_ARATH (40S ribosomal protein S15a-2 OS=Arabidopsis thaliana GN=RPS15AB PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.033e-12 Identity = 34/67 (50.75%), Postives = 47/67 (70.15%), Query Frame = 3 Query: 78 VLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*C 278 +LNDAL+++ NAEKRGK V + P S V+ FL +M++ GYI F+ D HR G+I V+L GR+N C Sbjct: 5 ILNDALRTIVNAEKRGKASVELKPVSTVMSSFLKIMKEKGYIKNFQVHDPHRVGRITVDLQGRVNDC 71
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: R15A5_ARATH (40S ribosomal protein S15a-5 OS=Arabidopsis thaliana GN=RPS15AE PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 1.349e-12 Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 3 Query: 78 VLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*C 278 +LNDAL+++ NAE+RGK V + P S V+ FL +M++ GYI F+ D HR G+I V+L GR+N C Sbjct: 5 ILNDALRTIVNAERRGKASVELKPISTVMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDLQGRVNDC 71
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_METIG (30S ribosomal protein S8P OS=Methanococcus igneus GN=rps8p PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.762e-12 Identity = 36/73 (49.32%), Postives = 50/73 (68.49%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CG 281 M ++ L +AL + N E+ GK+ I P+SK+I + L VMQ HGYIGEFE+++D RAG VEL G++N CG Sbjct: 1 MSLMDPLANALNHLTNCERVGKKVFYIKPASKLIGRVLKVMQDHGYIGEFEFIEDGRAGIFKVELIGKINKCG 73
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_METJA (30S ribosomal protein S8P OS=Methanocaldococcus jannaschii GN=rps8p PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.926e-12 Identity = 36/73 (49.32%), Postives = 51/73 (69.86%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CG 281 M ++ L +AL + N E+ GK+ V I P+SK+I + L VMQ +GYIGEFE+++D RAG VEL G++N CG Sbjct: 1 MSLMDPLANALNHISNCERVGKKVVYIKPASKLIGRVLKVMQDNGYIGEFEFIEDGRAGIFKVELIGKINKCG 73
BLAST of CF836005 vs. ExPASy Swiss-Prot
Match: RS8_METS3 (30S ribosomal protein S8P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rps8p PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.127e-12 Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 3 Query: 63 MVIVSVLNDALKSMYNAEKRGKRQVMI*PSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLN*CGV 284 M ++ L DAL ++ N E + K +I P+SK+I + L MQK YIG FEY+DD+RAG+ VEL G +N CGV Sbjct: 1 MSLMDPLADALTNIRNNELQVKDSCVISPASKLIGEVLSTMQKENYIGNFEYIDDNRAGQFKVELEGNINKCGV 74 The following BLAST results are available for this feature:
BLAST of CF836005 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 72
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836005 ID=CF836005; Name=CF836005; organism=Citrus sinensis; type=EST; length=284bpback to top |