CF838532
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: GEM1_USTMA (Mitochondrial Rho GTPase 1 OS=Ustilago maydis GN=GEM1 PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 6.785e-52 Identity = 101/204 (49.51%), Postives = 134/204 (65.69%), Query Frame = 3 Query: 165 VRIVVCGEKGTGKSSLIVTAAADTFPANVPPVLPPTRLPEDFYPDRVPITIIDTPSSVEDRGKLGEELRRADAVVLTYACDRPETLDELSTFWLPELRRLEVKVPVIVVGCKLDLRDEN-QQVSLEQVMMPIMQQFREIETCIECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALSD 773 VRIV+ G+ GKS+LI + + + A V V+PP LP + P+ V I+DT SS E R L ELRRA+ + + Y+ P + D + T+WLP +R L V VPVI+VG K+DLR + +LE + P+M +F+E+ETC+ECSA + V EVFY+AQKAVL+PT PL+D LKP CV ALKRIF LCD D+DG LSD Sbjct: 5 VRIVLAGDPDVGKSTLITSLVKEAYVAKVQKVVPPITLPPEVAPEAVVTKIVDTSSSPEHRANLEAELRRANVICIVYSISAPSSFDRIPTYWLPYIRSLGVNVPVILVGNKIDLRSGDVTNAALEDELAPVMAEFKEVETCVECSARIPLNVSEVFYFAQKAVLYPTAPLYDSREHVLKPACVDALKRIFRLCDSDKDGLLSD 208
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: GEM1_CRYNE (Mitochondrial Rho GTPase 1 OS=Cryptococcus neoformans GN=GEM1 PE=3 SV=2) HSP 1 Score: 185.267 bits (469), Expect = 3.261e-46 Identity = 92/203 (45.32%), Postives = 127/203 (62.56%), Query Frame = 3 Query: 165 VRIVVCGEKGTGKSSLIVTAAADTFPANVPPVLPPTRLPEDFYPDRVPITIIDTPSSVEDRGKLGEELRRADAVVLTYACDRPETLDELSTFWLPELRRLEVKVPVIVVGCKLDLRDEN-QQVSLEQVMMPIMQQFREIETCIECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALS 770 VRIV+ G+ G GKSS+I + + F NVP V+P +P + P+ +I+DT S+ R L + RA + L Y+ P + D ++ +WLP RR + VPVI+VG K+DLR LE PIM++F+E+ET +ECSAL + V EVFY+AQKAVLHPT PL+D LKP+C+ ALKRIF + D D+DG L+ Sbjct: 7 VRIVLVGDDGVGKSSIITSLIKEAFVTNVPHVVPEVTIPPEITPENFTTSIVDTSSNPRSRPHLLSSISRAHVICLVYSIADPSSFDRVAEYWLPLFRREGINVPVILVGNKIDLRGGRVTNQGLEDESAPIMREFKEVETVVECSALLPLNVSEVFYFAQKAVLHPTAPLYDSREHTLKPKCLEALKRIFTISDVDKDGLLN 209
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: MIRO2_CHICK (Mitochondrial Rho GTPase 2 OS=Gallus gallus GN=RHOT2 PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 6.365e-42 Identity = 90/209 (43.06%), Postives = 126/209 (60.29%), Query Frame = 3 Query: 156 KTGVRIVVCGEKGTGKSSLIVTAAADTFPANVPPVLPPTRLPEDFYPDRVPITIIDTPSSVEDRGKLGEELRRADAVVLTYACDRPETLDELSTFWLPELR---RLEVKVPVIVVGCKLDLRDENQQVSLEQVMMPIMQQFREIETCIECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALSD 773 K VRI++ GE GK+SLI+ + FP VPP +P D P++VP I+D S + +L EE+ +A+ V + Y + T++++ T W+P + ++P+I+VG K DL Q S +V++PIM QF EIETC+ECSA + E+FYYAQKAVLHPT PL+D E + L+P C RAL RIF L D D + LSD Sbjct: 2 KRDVRILLLGEAQVGKTSLIMALVGEEFPEEVPPRAEEITIPADVTPEKVPTHIVDYSESEQTEDELQEEIAKANVVCVVYDVTKEATIEKIRTKWIPMVNGGAEKGARIPIILVGNKSDL----QMGSSMEVILPIMNQFSEIETCVECSAKNLKNISELFYYAQKAVLHPTAPLYDPEEKQLRPACSRALTRIFNLSDQDNNQILSD 206
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: MIRO2_PIG (Mitochondrial Rho GTPase 2 OS=Sus scrofa GN=RHOT2 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.086e-41 Identity = 89/209 (42.58%), Postives = 127/209 (60.77%), Query Frame = 3 Query: 156 KTGVRIVVCGEKGTGKSSLIVTAAADTFPANVPPVLPPTRLPEDFYPDRVPITIIDTPSSVEDRGKLGEELRRADAVVLTYACDRPETLDELSTFWLPELR---RLEVKVPVIVVGCKLDLRDENQQVSLEQVMMPIMQQFREIETCIECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALSD 773 K VRI++ GE GK+SLI++ + FP VPP +P D P++VP I+D + + +L +E+++A V + Y T++++ T W+P + R +VP+I+VG K DLR + ++PIM QF EIETC+ECSA + E+FYYAQKAVLHPT PL+D E++ L+P C +AL RIF L D D D ALSD Sbjct: 2 KRDVRILLLGEAQVGKTSLILSLVGEEFPEEVPPRAEEITIPADVTPEKVPTHIVDYSEAEQTAEELQDEIQKASVVCVVYDVSEETTVEKIRTKWIPLVNGGTRRGPRVPIILVGNKSDLRPGGSM----EAVLPIMSQFPEIETCVECSAKNLKNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDMDQALSD 206
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: MIRO1_MOUSE (Mitochondrial Rho GTPase 1 OS=Mus musculus GN=Rhot1 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.086e-41 Identity = 85/209 (40.67%), Postives = 132/209 (63.16%), Query Frame = 3 Query: 156 KTGVRIVVCGEKGTGKSSLIVTAAADTFPANVPPVLPPTRLPEDFYPDRVPITIIDTPSSVEDRGKLGEELRRADAVVLTYACDRPETLDELSTFWLP---ELRRLEVKVPVIVVGCKLDLRDENQQVSLEQVMMPIMQQFREIETCIECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALSD 773 K VRI++ GE GK+SLI++ ++ FP VPP +P D P+RVP I+D + + +L +E+ +A+ + + YA + ++D++++ W+P E + ++P+I+VG K DL + S + ++PIM Q+ EIETC+ECSA + E+FYYAQKAVLHPTGPL+ E + +KP C++AL RIF + D D DG L+D Sbjct: 15 KKDVRILLVGEPRVGKTSLIMSLVSEEFPEEVPPRAEEITIPADVTPERVPTHIVDYSEAEQSDEQLHQEISQANVICIVYAVNNKHSIDKVTSRWIPLINERTDKDSRLPLILVGNKSDL----VEYSSMETILPIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKEMKPACIKALTRIFKISDQDNDGTLND 219
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: MIRO1_HUMAN (Mitochondrial Rho GTPase 1 OS=Homo sapiens GN=RHOT1 PE=1 SV=2) HSP 1 Score: 170.244 bits (430), Expect = 1.086e-41 Identity = 85/209 (40.67%), Postives = 132/209 (63.16%), Query Frame = 3 Query: 156 KTGVRIVVCGEKGTGKSSLIVTAAADTFPANVPPVLPPTRLPEDFYPDRVPITIIDTPSSVEDRGKLGEELRRADAVVLTYACDRPETLDELSTFWLP---ELRRLEVKVPVIVVGCKLDLRDENQQVSLEQVMMPIMQQFREIETCIECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALSD 773 K VRI++ GE GK+SLI++ ++ FP VPP +P D P+RVP I+D + + +L +E+ +A+ + + YA + ++D++++ W+P E + ++P+I+VG K DL + S + ++PIM Q+ EIETC+ECSA + E+FYYAQKAVLHPTGPL+ E + +KP C++AL RIF + D D DG L+D Sbjct: 2 KKDVRILLVGEPRVGKTSLIMSLVSEEFPEEVPPRAEEITIPADVTPERVPTHIVDYSEAEQSDEQLHQEISQANVICIVYAVNNKHSIDKVTSRWIPLINERTDKDSRLPLILVGNKSDL----VEYSSMETILPIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKEMKPACIKALTRIFKISDQDNDGTLND 206
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: MIRO1_BOVIN (Mitochondrial Rho GTPase 1 OS=Bos taurus GN=RHOT1 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.086e-41 Identity = 85/209 (40.67%), Postives = 132/209 (63.16%), Query Frame = 3 Query: 156 KTGVRIVVCGEKGTGKSSLIVTAAADTFPANVPPVLPPTRLPEDFYPDRVPITIIDTPSSVEDRGKLGEELRRADAVVLTYACDRPETLDELSTFWLP---ELRRLEVKVPVIVVGCKLDLRDENQQVSLEQVMMPIMQQFREIETCIECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALSD 773 K VRI++ GE GK+SLI++ ++ FP VPP +P D P+RVP I+D + + +L +E+ +A+ + + YA + ++D++++ W+P E + ++P+I+VG K DL + S + ++PIM Q+ EIETC+ECSA + E+FYYAQKAVLHPTGPL+ E + +KP C++AL RIF + D D DG L+D Sbjct: 15 KKDVRILLVGEPRVGKTSLIMSLVSEEFPEEVPPRAEEITIPADVTPERVPTHIVDYSEAEQSDEQLHQEISQANVICIVYAVNNKHSIDKVTSRWIPLINERTDKDSRLPLILVGNKSDL----VEYSSMETILPIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKEMKPACIKALTRIFKISDQDNDGTLND 219
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: MIRO2_DANRE (Mitochondrial Rho GTPase 2 OS=Danio rerio GN=rhot2 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.419e-41 Identity = 90/209 (43.06%), Postives = 126/209 (60.29%), Query Frame = 3 Query: 156 KTGVRIVVCGEKGTGKSSLIVTAAADTFPANVPPVLPPTRLPEDFYPDRVPITIIDTPSSVEDRGKLGEELRRADAVVLTYACDRPETLDELSTFWLPELR---RLEVKVPVIVVGCKLDLRDENQQVSLEQVMMPIMQQFREIETCIECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALSD 773 K VRI++ GE GK+SLI++ + FP VP +P D P++VP I+D + + L EE+ +A+ V + Y + ET+D++ T W+P + K+P+I+VG K DLR + + ++PIM QF EIETC+ECSA + E+FYYAQKAVLHPT PL+D E + LK +CVRAL RIF + D D D LSD Sbjct: 2 KRDVRILLLGEPKVGKTSLIMSLVGEEFPEQVPLRAEEITIPADVTPEKVPTHIVDYSENEQTDEVLREEIVKANVVCVVYDVTQEETIDKIRTKWIPLVNGGAEKGSKIPIILVGNKSDLRSGSSM----ETILPIMNQFSEIETCVECSAKNLKNISELFYYAQKAVLHPTAPLYDPEDKQLKAQCVRALSRIFSISDQDNDHILSD 206
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: GEM1_NEUCR (Mitochondrial Rho GTPase 1 OS=Neurospora crassa GN=gem-1 PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.159e-41 Identity = 94/208 (45.19%), Postives = 129/208 (62.02%), Query Frame = 3 Query: 159 TGVRIVVCGEKGTGKSSLIVTAAADTFPAN-VPPVLPPTRLPEDF-YPDRVPITIIDTPSSVEDRGKLGEELRRADAVVLTYACDRPETLDELSTFWLPELRRLEVKVPVIVVGCKLDL-RDENQQVSLEQVMMPIMQQFREIETCIECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALSD 773 T VRI VCG++GTGKSSLI + F AN + VLP +P P+ V TI+DT + +DR L +E+R+++ ++L Y+ + + ++ FW+P R L V VPV++ K DL D N E+ M+P+M +FREI++CI SA +Q V EVFY QKAV HP PLFD + LKP CV AL+RIF L D D+DG L+D Sbjct: 3 TAVRICVCGDEGTGKSSLIASLVKGVFVANKIQAVLPQVTIPPTTGTPENVTTTIVDTSARPQDRTTLRKEIRKSNVILLVYSDHY--SYERVALFWMPYFRSLGVNVPVVLCANKSDLVSDGNAAQVAEEEMLPVMAEFREIDSCIRTSAKEQKNVIEVFYLCQKAVTHPIAPLFDYKEGQLKPACVDALRRIFFLSDKDQDGYLND 208
BLAST of CF838532 vs. ExPASy Swiss-Prot
Match: MIRO2_HUMAN (Mitochondrial Rho GTPase 2 OS=Homo sapiens GN=RHOT2 PE=1 SV=2) HSP 1 Score: 168.318 bits (425), Expect = 4.126e-41 Identity = 88/206 (42.72%), Postives = 126/206 (61.17%), Query Frame = 3 Query: 165 VRIVVCGEKGTGKSSLIVTAAADTFPANVPPVLPPTRLPEDFYPDRVPITIIDTPSSVEDRGKLGEELRRADAVVLTYACDRPETLDELSTFWLPELRRLEV---KVPVIVVGCKLDLRDENQQVSLEQVMMPIMQQFREIETCIECSALKQIQVPEVFYYAQKAVLHPTGPLFDQESQALKPRCVRALKRIFILCDHDRDGALSD 773 VRI++ GE GK+SLI++ + FP VPP +P D P++VP I+D + + +L EE+ +A+ V + Y T++++ T W+P + +VP+I+VG K DLR + + ++PIM QF EIETC+ECSA + E+FYYAQKAVLHPT PL+D E++ L+P C +AL RIF L D D D ALSD Sbjct: 5 VRILLLGEAQVGKTSLILSLVGEEFPEEVPPRAEEITIPADVTPEKVPTHIVDYSEAEQTDEELREEIHKANVVCVVYDVSEEATIEKIRTKWIPLVNGGTTQGPRVPIILVGNKSDLRSGSSM----EAVLPIMSQFPEIETCVECSAKNLRNISELFYYAQKAVLHPTAPLYDPEAKQLRPACAQALTRIFRLSDQDLDQALSD 206 The following BLAST results are available for this feature:
BLAST of CF838532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 45
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF838532 ID=CF838532; Name=CF838532; organism=Citrus sinensis; type=EST; length=774bpback to top |