CK934031

Overview
NameCK934031
Unique NameCK934031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length484
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig121 contig Csv1_Contig121:719..1204. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK934031 vs. ExPASy Swiss-Prot
Match: FRI2_SOYBN (Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.309e-11
Identity = 30/41 (73.17%), Postives = 37/41 (90.24%), Query Frame = 1 
Query:    4 EFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHEGD 126
            EFL EQV++I KIA+YV+QLR+VGKGHG+WHFDQ LLH+ D
Sbjct:  215 EFLYEQVKSIKKIAEYVAQLRLVGKGHGVWHFDQKLLHDED 255
[Close]
BLAST of CK934031 vs. ExPASy Swiss-Prot
Match: FRI1_TOBAC (Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=FER1 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.809e-11
Identity = 31/43 (72.09%), Postives = 38/43 (88.37%), Query Frame = 1 
Query:    4 EFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHEGDAA 132
            EFL EQV+AI KI++YV+QLR VG+GHG+W FDQMLL+EG AA
Sbjct:  209 EFLVEQVDAIKKISEYVAQLRRVGQGHGVWQFDQMLLNEGAAA 251
The following BLAST results are available for this feature:
BLAST of CK934031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
FRI2_SOYBN1.309e-1173.17Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI1_TOBAC3.809e-1172.09Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_B05 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934031 ID=CK934031; Name=CK934031; organism=Citrus sinensis; type=EST; length=484bp
GGGGAATTTTTGGGTGAGCAGGTTGAAGCAATTAACAAGATCGCAAAATA
TGTTTCTCAACTGAGGATGGTTGGGAAAGGCCACGGATTATGGCACTTCG
ATCAAATGCTTCTCCACGAGGGTGATGCTGCATGATGAAGAACCATATTG
TTATTTCTTTGTGCTTTAGTCAACTCTTTTCTGCCAAATGTTCTGAAGTA
TCTCTGCCACAGGAGGTTGAGTGTGTTGACAAAAAATAAGCTGAAACAGT
GTTAAGTCCTACAAAGTTAATACTCAGTAGCCTCCTTGCTTTATCATATT
AGTGTGGTCGCATTTAGATAGTCTTTTTGATGGTGCTTTTTCTTTATTTA
GTAACAGACTGTGTGAAGGGATCTAATAGTTTAAGCAGAGCACCAAATCC
ATCTTCTGATTGTATAAATATAATTAAGTTGTTCAATAAAAGTTCTGTTT
CTGCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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