CK934322
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934322 vs. ExPASy Swiss-Prot
Match: SCAM1_ORYSI (Putative secretory carrier-associated membrane protein 1 OS=Oryza sativa subsp. indica GN=SCAMP1 PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.539e-36 Identity = 42/60 (70.00%), Postives = 48/60 (80.00%), Query Frame = 1 Query: 163 WIKGGGVQIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCIF 342 W+KG GV+I+ LA IY + GVP +YVLWYRPLY AMRTDSALKF FFL YL HI FC+F Sbjct: 166 WVKGEGVKIWLLAIIYFISGVPGAYVLWYRPLYNAMRTDSALKFGLFFLVYLFHILFCVF 225 HSP 2 Score: 78.9518 bits (193), Expect = 4.539e-36 Identity = 32/49 (65.31%), Postives = 41/49 (83.67%), Query Frame = 3 Query: 9 DDKNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAV 155 ++KNWPPF P+IHHDI+ EIP H QR+QY+AFAS+ G+ CL +NVIAV Sbjct: 114 EEKNWPPFLPLIHHDITNEIPSHLQRMQYVAFASFLGLACCLFWNVIAV 162
BLAST of CK934322 vs. ExPASy Swiss-Prot
Match: SCAM5_ARATH (Secretory carrier-associated membrane protein 5 OS=Arabidopsis thaliana GN=SCAMP5 PE=2 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 1.839e-34 Identity = 41/60 (68.33%), Postives = 47/60 (78.33%), Query Frame = 1 Query: 163 WIKGGGVQIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCIF 342 WIKG GV I+ LA IY + GVP YVLWYRPLYRA R+DSA F WFFLFY++HI FC+F Sbjct: 151 WIKGEGVTIWLLAVIYFISGVPGGYVLWYRPLYRAFRSDSAFNFGWFFLFYMLHILFCLF 210 HSP 2 Score: 71.633 bits (174), Expect = 1.839e-34 Identity = 30/47 (63.83%), Postives = 39/47 (82.98%), Query Frame = 3 Query: 15 KNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAV 155 KNWP FFP+IHHDI+ EI + QRLQY+AFA++ G+VL L +N+IAV Sbjct: 101 KNWPTFFPLIHHDIANEILVRLQRLQYIAFATYLGLVLALFWNIIAV 147
BLAST of CK934322 vs. ExPASy Swiss-Prot
Match: SCAM2_ARATH (Secretory carrier-associated membrane protein 2 OS=Arabidopsis thaliana GN=SCAMP2 PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 1.524e-33 Identity = 41/60 (68.33%), Postives = 45/60 (75.00%), Query Frame = 1 Query: 163 WIKGGGVQIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCIF 342 WIKG G I+ L+ IY L GVP +YVLWYRPLYRA RTDSALKF FF FY+ HI FC F Sbjct: 143 WIKGEGPTIWLLSIIYFLAGVPGAYVLWYRPLYRATRTDSALKFGAFFFFYVFHIAFCGF 202 HSP 2 Score: 75.0998 bits (183), Expect = 1.524e-33 Identity = 29/49 (59.18%), Postives = 41/49 (83.67%), Query Frame = 3 Query: 9 DDKNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAV 155 ++KNWP FFP+IHHDI EIPIH Q++QY+AF + G+V CL++N++AV Sbjct: 91 EEKNWPEFFPLIHHDIPNEIPIHLQKIQYVAFTTLLGLVGCLLWNIVAV 139 The following BLAST results are available for this feature:
BLAST of CK934322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934322 ID=CK934322; Name=CK934322; organism=Citrus sinensis; type=EST; length=344bpback to top |