CK934322
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934322 vs. ExPASy Swiss-Prot
Match: SCAM4_ARATH (Secretory carrier-associated membrane protein 4 OS=Arabidopsis thaliana GN=SCAMP4 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.778e-51 Identity = 53/60 (88.33%), Postives = 56/60 (93.33%), Query Frame = 1 Query: 160 CWIKGGGVQIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCI 339 CWIKGGGV+IFFLATIYAL+G P+SYVLWYRPLYRAMRTDSALKF WFF YLIHIGFCI Sbjct: 141 CWIKGGGVKIFFLATIYALIGCPLSYVLWYRPLYRAMRTDSALKFGWFFFTYLIHIGFCI 200 HSP 2 Score: 102.834 bits (255), Expect = 1.778e-51 Identity = 44/51 (86.27%), Postives = 49/51 (96.08%), Query Frame = 3 Query: 9 DDKNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIL 161 DDKNWPPFFPIIHHDI+KEIP+HAQ+LQYLAFASW GIVLCLVFNVIA ++ Sbjct: 90 DDKNWPPFFPIIHHDIAKEIPVHAQKLQYLAFASWLGIVLCLVFNVIATMV 140
BLAST of CK934322 vs. ExPASy Swiss-Prot
Match: SCAM6_ORYSJ (Secretory carrier-associated membrane protein 6 OS=Oryza sativa subsp. japonica GN=SCAMP6 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.424e-44 Identity = 46/60 (76.67%), Postives = 53/60 (88.33%), Query Frame = 1 Query: 160 CWIKGGGVQIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCI 339 CWIK G ++FFLATIYALLG+P+SY++WYRPLYRAMRT+SA F WFFL YLIHIGFCI Sbjct: 150 CWIKEGDSKLFFLATIYALLGIPLSYLIWYRPLYRAMRTNSAFSFGWFFLCYLIHIGFCI 209 HSP 2 Score: 92.0485 bits (227), Expect = 1.424e-44 Identity = 40/53 (75.47%), Postives = 46/53 (86.79%), Query Frame = 3 Query: 3 PTDDKNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIL 161 P +DKNWPPFFPIIHHDI+ EIP + Q+LQYLAFASW GIVLCL +N IAVI+ Sbjct: 97 PMEDKNWPPFFPIIHHDIANEIPANLQKLQYLAFASWLGIVLCLSWNFIAVIV 149
BLAST of CK934322 vs. ExPASy Swiss-Prot
Match: SCAM5_ORYSJ (Secretory carrier-associated membrane protein 5 OS=Oryza sativa subsp. japonica GN=SCAMP5 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.856e-44 Identity = 42/61 (68.85%), Postives = 53/61 (86.89%), Query Frame = 1 Query: 160 CWIKGGGVQIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCIF 342 CWI+GG ++FFLATIY +LG+P+SY++WYRPLYRAMRTDSA F WFFL Y++HI FC+F Sbjct: 158 CWIRGGDSKLFFLATIYGMLGMPLSYLMWYRPLYRAMRTDSAFSFGWFFLCYMLHIAFCVF 218 HSP 2 Score: 92.8189 bits (229), Expect = 1.856e-44 Identity = 40/53 (75.47%), Postives = 47/53 (88.68%), Query Frame = 3 Query: 3 PTDDKNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIL 161 P ++KNWPPFFPIIHHDI+ EIP +AQ+LQYLAFASW GIVLCL +N IAVI+ Sbjct: 105 PMEEKNWPPFFPIIHHDIANEIPANAQKLQYLAFASWLGIVLCLFWNFIAVIV 157
BLAST of CK934322 vs. ExPASy Swiss-Prot
Match: SCAM_PEA (Secretory carrier-associated membrane protein OS=Pisum sativum GN=PSAM2 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.627e-39 Identity = 44/59 (74.58%), Postives = 51/59 (86.44%), Query Frame = 1 Query: 163 WIKGGGVQIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCI 339 WIKG GV+I+FLA IY + GVP +Y LWYRPLYRA RTDSA+KF WFF+FYL+HIGFCI Sbjct: 148 WIKGEGVKIWFLAIIYFIAGVPGAYALWYRPLYRAFRTDSAIKFGWFFMFYLLHIGFCI 206 HSP 2 Score: 80.1073 bits (196), Expect = 1.627e-39 Identity = 33/49 (67.35%), Postives = 42/49 (85.71%), Query Frame = 3 Query: 9 DDKNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAV 155 ++KNWPPFFPIIHHDI+ EIPIH + LQY+AF S G+VLCL +NV++V Sbjct: 96 EEKNWPPFFPIIHHDITNEIPIHLRTLQYVAFFSLLGLVLCLTWNVVSV 144
BLAST of CK934322 vs. ExPASy Swiss-Prot
Match: SCAM3_ARATH (Secretory carrier-associated membrane protein 3 OS=Arabidopsis thaliana GN=SCAMP3 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 2.120e-39 Identity = 43/60 (71.67%), Postives = 48/60 (80.00%), Query Frame = 1 Query: 163 WIKGGGVQIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCIF 342 WIKG GV I+ LA IY + GVP YVLWYRPLYRA RTDSAL F WFFLFY++HI FC+F Sbjct: 149 WIKGEGVTIWLLALIYFIAGVPGGYVLWYRPLYRAFRTDSALSFGWFFLFYMLHIAFCVF 208 HSP 2 Score: 83.1889 bits (204), Expect = 2.120e-39 Identity = 33/47 (70.21%), Postives = 42/47 (89.36%), Query Frame = 3 Query: 15 KNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAV 155 KNWPPFFP+IHHDI+ EIP+H QRLQY+ FA++ G+VLCL +N+IAV Sbjct: 99 KNWPPFFPLIHHDIANEIPVHLQRLQYVTFATYLGLVLCLFWNIIAV 145
BLAST of CK934322 vs. ExPASy Swiss-Prot
Match: SCAM1_ARATH (Secretory carrier-associated membrane protein 1 OS=Arabidopsis thaliana GN=SCAMP1 PE=1 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.121e-39 Identity = 43/60 (71.67%), Postives = 48/60 (80.00%), Query Frame = 1 Query: 163 WIKGGGVQIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCIF 342 WIKG G I+FLA IY + GVP +YV+WYRPLYRAMRTDSALKF WFF YL HI FC+F Sbjct: 142 WIKGEGPTIWFLAIIYFISGVPGAYVMWYRPLYRAMRTDSALKFGWFFFTYLFHIAFCVF 201 HSP 2 Score: 84.7297 bits (208), Expect = 2.121e-39 Identity = 33/49 (67.35%), Postives = 44/49 (89.80%), Query Frame = 3 Query: 9 DDKNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAV 155 ++KNWPPFFP+IHHDIS EIPIH QR+QY+AF S G+V+CL++N++AV Sbjct: 90 EEKNWPPFFPLIHHDISNEIPIHLQRIQYVAFTSMLGLVVCLLWNIVAV 138
BLAST of CK934322 vs. ExPASy Swiss-Prot
Match: SCAM2_ORYSJ (Secretory carrier-associated membrane protein 2 OS=Oryza sativa subsp. japonica GN=SCAMP2 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.599e-39 Identity = 45/60 (75.00%), Postives = 50/60 (83.33%), Query Frame = 1 Query: 163 WIKGGGVQIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCIF 342 WIKG GV I+ LA IY + GVP +YVLWYRPLY AMRT+SALKF WFFLFYLIHI FCI+ Sbjct: 146 WIKGAGVMIWLLAIIYFISGVPGAYVLWYRPLYNAMRTESALKFGWFFLFYLIHILFCIW 205 HSP 2 Score: 82.4185 bits (202), Expect = 3.599e-39 Identity = 34/48 (70.83%), Postives = 41/48 (85.42%), Query Frame = 3 Query: 9 DDKNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIA 152 ++KNWPPFFPIIHHDIS EIPIH QR+QYLAF+S G+ CL +N+IA Sbjct: 94 EEKNWPPFFPIIHHDISNEIPIHLQRMQYLAFSSLLGLAACLFWNIIA 141
BLAST of CK934322 vs. ExPASy Swiss-Prot
Match: SCAM4_ORYSJ (Secretory carrier-associated membrane protein 4 OS=Oryza sativa subsp. japonica GN=SCAMP4 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 6.101e-39 Identity = 42/60 (70.00%), Postives = 50/60 (83.33%), Query Frame = 1 Query: 163 WIKGGGVQIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCIF 342 WIKG G +I+FLA IY +LG P +Y LWYRPLYRAMR +SALKF WFFLFYL+HI FC++ Sbjct: 173 WIKGEGPKIWFLAVIYFILGCPGAYYLWYRPLYRAMRNESALKFGWFFLFYLVHIAFCVY 232 HSP 2 Score: 81.6481 bits (200), Expect = 6.101e-39 Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 3 Query: 9 DDKNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAV 155 +DKNWPPFFPIIH+DI EIP+H QR QY+AFAS G+VLCL +N+I V Sbjct: 121 EDKNWPPFFPIIHNDIGNEIPVHLQRTQYVAFASLLGLVLCLFWNIICV 169
BLAST of CK934322 vs. ExPASy Swiss-Prot
Match: SCAM3_ORYSJ (Secretory carrier-associated membrane protein 3 OS=Oryza sativa subsp. japonica GN=SCAMP3 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 2.294e-38 Identity = 43/60 (71.67%), Postives = 50/60 (83.33%), Query Frame = 1 Query: 163 WIKGGGVQIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCIF 342 W+KG GV I+ LA IY + GVP +YVLWYRPLY AMRT+SALKF WFFLFYLIHI FC++ Sbjct: 142 WVKGEGVIIWLLAIIYFISGVPGAYVLWYRPLYNAMRTESALKFGWFFLFYLIHIIFCVW 201 HSP 2 Score: 82.4185 bits (202), Expect = 2.294e-38 Identity = 33/48 (68.75%), Postives = 42/48 (87.50%), Query Frame = 3 Query: 9 DDKNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIA 152 +DKNWPPFFP+IHH+IS EIPIH QR+QYLAF+S+ G+ CL +N+IA Sbjct: 90 EDKNWPPFFPLIHHNISNEIPIHLQRMQYLAFSSFLGLAACLFWNIIA 137
BLAST of CK934322 vs. ExPASy Swiss-Prot
Match: SCAM1_ORYSJ (Secretory carrier-associated membrane protein 1 OS=Oryza sativa subsp. japonica GN=SCAMP1 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 4.539e-36 Identity = 42/60 (70.00%), Postives = 48/60 (80.00%), Query Frame = 1 Query: 163 WIKGGGVQIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCIF 342 W+KG GV+I+ LA IY + GVP +YVLWYRPLY AMRTDSALKF FFL YL HI FC+F Sbjct: 166 WVKGEGVKIWLLAIIYFISGVPGAYVLWYRPLYNAMRTDSALKFGLFFLVYLFHILFCVF 225 HSP 2 Score: 78.9518 bits (193), Expect = 4.539e-36 Identity = 32/49 (65.31%), Postives = 41/49 (83.67%), Query Frame = 3 Query: 9 DDKNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAV 155 ++KNWPPF P+IHHDI+ EIP H QR+QY+AFAS+ G+ CL +NVIAV Sbjct: 114 EEKNWPPFLPLIHHDITNEIPSHLQRMQYVAFASFLGLACCLFWNVIAV 162 The following BLAST results are available for this feature:
BLAST of CK934322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934322 ID=CK934322; Name=CK934322; organism=Citrus sinensis; type=EST; length=344bpback to top |