CK934899
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934899 vs. ExPASy Swiss-Prot
Match: RS23_SACCA (40S ribosomal protein S23 OS=Saccharomyces castellii GN=RPS23A PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.721e-57 Identity = 108/142 (76.06%), Postives = 122/142 (85.92%), Query Frame = 2 Query: 95 GKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEANQPNSAIRKCATVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 517 GK RG+ + RKL+ HRR RWA+ +YKK LG +K PF GSSHAKGIVLEK+GIE+ QPNSAIRKC VQLIKNGKK+ AFVPNDGCLN+++ENDEVL+AGFGRKG A GDIPGVRFKVVKVSGVSLLAL+KEKKEKPRS Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS 145
BLAST of CK934899 vs. ExPASy Swiss-Prot
Match: RS23_SACBA (40S ribosomal protein S23 OS=Saccharomyces bayanus GN=RPS23A PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.721e-57 Identity = 108/142 (76.06%), Postives = 122/142 (85.92%), Query Frame = 2 Query: 95 GKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEANQPNSAIRKCATVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 517 GK RG+ + RKL+ HRR RWA+ +YKK LG +K PF GSSHAKGIVLEK+GIE+ QPNSAIRKC VQLIKNGKK+ AFVPNDGCLN+++ENDEVL+AGFGRKG A GDIPGVRFKVVKVSGVSLLAL+KEKKEKPRS Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS 145
BLAST of CK934899 vs. ExPASy Swiss-Prot
Match: RS23_CANGA (40S ribosomal protein S23 OS=Candida glabrata GN=RPS23 PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.721e-57 Identity = 108/142 (76.06%), Postives = 122/142 (85.92%), Query Frame = 2 Query: 95 GKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEANQPNSAIRKCATVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 517 GK RG+ + RKL+ HRR RWA+ +YKK LG +K PF GSSHAKGIVLEK+GIE+ QPNSAIRKC VQLIKNGKK+ AFVPNDGCLN+++ENDEVL+AGFGRKG A GDIPGVRFKVVKVSGVSLLAL+KEKKEKPRS Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS 145
BLAST of CK934899 vs. ExPASy Swiss-Prot
Match: RS23_NEUCR (40S ribosomal protein S23 OS=Neurospora crassa GN=rps-23 PE=3 SV=1) HSP 1 Score: 221.476 bits (563), Expect = 3.833e-57 Identity = 108/142 (76.06%), Postives = 121/142 (85.21%), Query Frame = 2 Query: 95 GKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEANQPNSAIRKCATVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 517 GK RG+ A RKL+ +RR QRW+D YKK LG +K PF GSSHAKGIVLEK+G+EA QPNSAIRKC VQLIKNGKK+ AFVPNDGCLN+++ENDEVL+AGFGRKG A GDIPGVRFKVVKVSGV LLAL+KEKKEKPRS Sbjct: 4 GKPRGLNAARKLRNNRREQRWSDLHYKKRALGTAFKSSPFGGSSHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVGLLALWKEKKEKPRS 145
BLAST of CK934899 vs. ExPASy Swiss-Prot
Match: RS23_CIOIN (40S ribosomal protein S23 OS=Ciona intestinalis GN=RPS23 PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 5.536e-56 Identity = 108/143 (75.52%), Postives = 116/143 (81.12%), Query Frame = 2 Query: 92 MGKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEANQPNSAIRKCATVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 517 MGK G+ RKL RR Q+W D YKKSHLG K PF G+SHAKGIVLEKIG+EA QPNSAIRKC VQLIKNGKKI AFVPNDGCLNYIEENDEVL+AGFGR GHAVGDIPGVRFK+VKV+ VSL ALF KKE+PRS Sbjct: 1 MGKPSGLRCARKLXNRRRDQKWHDXXYKKSHLGTALKANPFGGASHAKGIVLEKIGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNYIEENDEVLVAGFGRSGHAVGDIPGVRFKIVKVANVSLHALFTGKKERPRS 143
BLAST of CK934899 vs. ExPASy Swiss-Prot
Match: RS23_GILMI (40S ribosomal protein S23 OS=Gillichthys mirabilis GN=rps23 PE=2 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 9.442e-56 Identity = 104/143 (72.73%), Postives = 119/143 (83.22%), Query Frame = 2 Query: 92 MGKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEANQPNSAIRKCATVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 517 MGK RG+ RKL+ HRR Q+W DK YKK+HLG K PF +SHAKGIVLEK+G+EA QPNSAIRKC VQLIKNGKKI AFVPNDGCLN+ EENDEVL+AGFGRK HAVGDIPGVRFKVV+++ VSLLAL+K KE+P+S Sbjct: 1 MGKCRGLRTARKLRNHRREQKWHDKQYKKAHLGTALKANPFGSASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFXEENDEVLVAGFGRKXHAVGDIPGVRFKVVEMANVSLLALYKGXKERPKS 143
BLAST of CK934899 vs. ExPASy Swiss-Prot
Match: RS23_SCHPO (40S ribosomal protein S23 OS=Schizosaccharomyces pombe GN=rps23a PE=2 SV=2) HSP 1 Score: 215.312 bits (547), Expect = 2.747e-55 Identity = 104/143 (72.73%), Postives = 119/143 (83.22%), Query Frame = 2 Query: 92 MGKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEANQPNSAIRKCATVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 517 MGK G+ A RKL+ HRR +RWAD YKK LG +K PF GSSHAKGIV+EKIG+EA QPNSAIRKC VQLIKNGKK+ AFVP+DGCLN+++ENDEVL++GFGRKG A GDIPGVRFKVVKV+GV L ALF EKKEKPR+ Sbjct: 1 MGKPAGLNAARKLRNHRREERWADAHYKKRLLGTAYKSSPFGGSSHAKGIVVEKIGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPHDGCLNFVDENDEVLLSGFGRKGKAKGDIPGVRFKVVKVAGVGLSALFHEKKEKPRA 143
BLAST of CK934899 vs. ExPASy Swiss-Prot
Match: RS12_TETTH (40S ribosomal protein S12 OS=Tetrahymena thermophila PE=3 SV=1) HSP 1 Score: 206.068 bits (523), Expect = 1.667e-52 Identity = 98/139 (70.50%), Postives = 113/139 (81.29%), Query Frame = 2 Query: 92 MGKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEANQPNSAIRKCATVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEK 508 +GK RG+ AGRKL HR+ QRWAD + K LG+ W+ PF G+SHAKG+V EKIGIE+ QPNSA+RKC V L KN KKIAAFVP DGCLN++ ENDEVL+AG GR+GHAVGDIPGVRFKVV V G+SLLALFK KKEK Sbjct: 3 VGKPRGIRAGRKLARHRKDQRWADNDFNKRLLGSRWRNPFMGASHAKGLVTEKIGIESKQPNSAVRKCVRVLLRKNSKKIAAFVPMDGCLNFLAENDEVLVAGLGRQGHAVGDIPGVRFKVVCVKGISLLALFKGKKEK 141
BLAST of CK934899 vs. ExPASy Swiss-Prot
Match: RS23_DICDI (40S ribosomal protein S23 OS=Dictyostelium discoideum GN=rps23 PE=3 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 8.272e-52 Identity = 97/141 (68.79%), Postives = 113/141 (80.14%), Query Frame = 2 Query: 92 MGKTRGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEANQPNSAIRKCATVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKP 511 MGK G+ RKL+ HRR QRW DK YKK+H G K PF G+SHA GIV+ ++GIEA QPNSAIRKC VQL KNGKKI AFVPNDGCLNYI+END+VL+AG GR GH+VGDIPGVRFKVVKVS VSL+A+++ K+KP Sbjct: 1 MGKPNGLKTARKLRNHRRVQRWNDKLYKKAHFGTALKANPFGGASHASGIVVSRLGIEAKQPNSAIRKCVRVQLKKNGKKITAFVPNDGCLNYIQENDKVLVAGLGRSGHSVGDIPGVRFKVVKVSSVSLIAIYRGIKDKP 141
BLAST of CK934899 vs. ExPASy Swiss-Prot
Match: RS12_PICTO (30S ribosomal protein S12P OS=Picrophilus torridus GN=rps12p PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 5.205e-38 Identity = 76/136 (55.88%), Postives = 102/136 (75.00%), Query Frame = 2 Query: 107 GMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEANQPNSAIRKCATVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEK 508 G+ AG+KL R+T RW+D+ YK+ L + K P G+ AKGIV+EK+GIEA QPNS IRKC +QLIKNG++++AF P DG +NYI+E+DEV++ G GR G + GDIPGVR+KV+KV+G+SL L K +KEK Sbjct: 4 GLNAGKKLMKSRKTYRWSDRDYKRRVLNLKKKSDPLEGAPQAKGIVIEKVGIEAKQPNSGIRKCVKIQLIKNGRQLSAFAPGDGAINYIDEHDEVVVEGIGGRMGRSKGDIPGVRYKVIKVNGISLHELVKGRKEK 139 The following BLAST results are available for this feature:
BLAST of CK934899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934899 ID=CK934899; Name=CK934899; organism=Citrus sinensis; type=EST; length=740bpback to top |