CK934899
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934899 vs. ExPASy Swiss-Prot
Match: RS12_METM7 (30S ribosomal protein S12P OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps12p PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 7.534e-29 Identity = 68/137 (49.64%), Postives = 89/137 (64.96%), Query Frame = 2 Query: 104 RGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEANQPNSAIRKCATVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEK 508 +G AGRKL RR RW Y L + K P G+ +GIV+EK+G+EA QPNSAIRKC VQLIKNG+++ AF P + +N+I+E+DEV+I G G G A GDIPGVR+KVV V S+ L + ++EK Sbjct: 8 KGEFAGRKLLLKRRASRWHHYKYVNKALSLKLKADPLEGAPMGRGIVVEKVGLEAKQPNSAIRKCVRVQLIKNGRQVTAFAPGNHAINFIDEHDEVVIEGIGGPSGQAKGDIPGVRYKVVMVGKNSIRELVRGRQEK 144
BLAST of CK934899 vs. ExPASy Swiss-Prot
Match: RS12_METVS (30S ribosomal protein S12P OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rps12p PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.285e-28 Identity = 67/137 (48.91%), Postives = 89/137 (64.96%), Query Frame = 2 Query: 104 RGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEANQPNSAIRKCATVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEK 508 +G AGRKL R+ RW Y LG + K P G+ +GIV+EK+G+EA QPNSAIRKC VQLIKNG+ + AF P + +N+I+E+DEV+I G G G A GDIPGVR+KV+ V S+ L + ++EK Sbjct: 8 KGEFAGRKLLLKRKATRWQHYKYVNRELGLKVKADPLGGAPMGRGIVVEKVGLEAKQPNSAIRKCVKVQLIKNGRVVTAFAPGNHAINFIDEHDEVVIEGIGGPSGQAKGDIPGVRYKVLMVGKNSIRELVRGRQEK 144
BLAST of CK934899 vs. ExPASy Swiss-Prot
Match: RS12_METMP (30S ribosomal protein S12P OS=Methanococcus maripaludis GN=rps12p PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.678e-28 Identity = 67/137 (48.91%), Postives = 89/137 (64.96%), Query Frame = 2 Query: 104 RGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEANQPNSAIRKCATVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEK 508 +G AGRKL R+ RW Y L + K P G+ +GIV+EK+G+EA QPNSAIRKC VQLIKNG+++ AF P + +N+I+E+DEV+I G G G A GDIPGVR+KVV V S+ L + ++EK Sbjct: 8 KGEFAGRKLLLKRKASRWHHYKYVNKALSLKLKADPLEGAPMGRGIVIEKVGLEAKQPNSAIRKCVRVQLIKNGRQVTAFAPGNHAINFIDEHDEVVIEGIGGPSGQAKGDIPGVRYKVVLVGKNSIRELVRGRQEK 144
BLAST of CK934899 vs. ExPASy Swiss-Prot
Match: RS12_METM5 (30S ribosomal protein S12P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps12p PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.678e-28 Identity = 67/137 (48.91%), Postives = 89/137 (64.96%), Query Frame = 2 Query: 104 RGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEANQPNSAIRKCATVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEK 508 +G AGRKL R+ RW Y L + K P G+ +GIV+EK+G+EA QPNSAIRKC VQLIKNG+++ AF P + +N+I+E+DEV+I G G G A GDIPGVR+KVV V S+ L + ++EK Sbjct: 8 KGEFAGRKLLLKRKASRWHHYKYVNKALSLKLKADPLEGAPMGRGIVVEKVGLEAKQPNSAIRKCVRVQLIKNGRQVTAFAPGNHAINFIDEHDEVVIEGIGGPSGQAKGDIPGVRYKVVMVGKNSIRELVRGRQEK 144
BLAST of CK934899 vs. ExPASy Swiss-Prot
Match: RS12_METJA (30S ribosomal protein S12P OS=Methanocaldococcus jannaschii GN=rps12p PE=3 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.678e-28 Identity = 68/138 (49.28%), Postives = 93/138 (67.39%), Query Frame = 2 Query: 104 RGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEANQPNSAIRKCATVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFG--RKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEK 508 RG AGRKL+ R+ RW D +Y + L + K P G+ A+GIV+EK+G+EA QPNSAIRKC VQLIKNG+ + AF P + +N+I+E+DEV+I G G + A GDIPGV++KV+ V SL L + ++EK Sbjct: 8 RGEFAGRKLRLKRKWCRWHDYNYVRRVLKLKEKYDPLEGAPMARGIVIEKVGLEAKQPNSAIRKCVRVQLIKNGRVVTAFCPGNHAINFIDEHDEVIIEGIGGPKGPRAKGDIPGVKYKVIMVGRNSLRELVRGRQEK 145
BLAST of CK934899 vs. ExPASy Swiss-Prot
Match: RS12_METLZ (30S ribosomal protein S12P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps12p PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.863e-28 Identity = 69/139 (49.64%), Postives = 89/139 (64.03%), Query Frame = 2 Query: 104 RGMGAGRKLKTHRRTQRWADKSYKKSHLGNEWKK-PFAGSSHAKGIVLEKIGIEANQPNSAIRKCATVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPR 514 +G A R L + RW+D Y + L + K P G+ + IVLEK+G+EA QPNSAIRKC VQLIKNG+++ AF DG +N+I+E+DEV I G GR G ++GDIPGVRF V V+GVSL L + EK R Sbjct: 3 QGKFAARNLVRTAKKFRWSDSVYSRRALKLKLKADPLEGAPIGRAIVLEKVGVEAKQPNSAIRKCVRVQLIKNGRQVTAFAVGDGAINFIDEHDEVTICGIGGRAGRSMGDIPGVRFVVSGVNGVSLNELVIGRAEKAR 141
BLAST of CK934899 vs. ExPASy Swiss-Prot
Match: RS12_META3 (30S ribosomal protein S12P OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps12p PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.739e-28 Identity = 67/139 (48.20%), Postives = 88/139 (63.31%), Query Frame = 2 Query: 104 RGMGAGRKLKTHRRTQRWADKSYKKSHLG-NEWKKPFAGSSHAKGIVLEKIGIEANQPNSAIRKCATVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPR 514 +G AGRK+ R+ RW Y L E P G+ +GIV+EK+G+EA QPNSAIRKC VQLIKNG+ + AF P + +N+I+E+DEV+I G G G A GDIPGVRF+VV V S+ L + ++EK R Sbjct: 8 KGEFAGRKIVLKRKESRWHHYKYVNKALKLKEKSDPLGGAPMGRGIVVEKVGLEAKQPNSAIRKCVKVQLIKNGRVVTAFAPGNHAINFIDEHDEVVIEGIGGPSGQAKGDIPGVRFRVVMVGKNSMRELVRGRQEKVR 146
BLAST of CK934899 vs. ExPASy Swiss-Prot
Match: RS12_NANEQ (30S ribosomal protein S12P OS=Nanoarchaeum equitans GN=rps12p PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.500e-26 Identity = 70/138 (50.72%), Postives = 85/138 (61.59%), Query Frame = 2 Query: 107 GMGAGRKLKTHRRTQRWADKSYKKSHLGNEWK-KPFAGSSHAKGIVLEKIGIEANQPNSAIRKCATVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGF-GRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPR 514 G+ AGRKLK R+ RW D Y + L + K P G+ A GIVLEK +E QPNS K VQL KNGK + AF P DG + I+E+DEVLI G GR+G ++GDIPGVR+KV V+G L L K K EK R Sbjct: 5 GLFAGRKLKKIRKKFRWNDYRYVRRMLRIKEKYDPLEGAPMASGIVLEKTDVERRQPNSGRIKVVRVQLKKNGKVVTAFTPGDGAIKVIDEHDEVLIVGIRGRQGRSMGDIPGVRYKVYLVNGQPLELLRKGKIEKAR 142 The following BLAST results are available for this feature:
BLAST of CK934899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934899 ID=CK934899; Name=CK934899; organism=Citrus sinensis; type=EST; length=740bpback to top |