EY753550

Overview
NameEY753550
Unique NameEY753550
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753550 vs. ExPASy Swiss-Prot
Match: H2B_TOBAC (Histone H2B OS=Nicotiana tabacum GN=HIS2B PE=2 SV=3)

HSP 1 Score: 167.548 bits (423), Expect = 6.121e-41
Identity = 85/92 (92.39%), Postives = 90/92 (97.83%), Query Frame = 3
Query:  213 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 488
            +VETYKIYIF+VLK VHPDIGISSKAMGIMNSFINDIFEKLA+E+SRLA YNKKPTI+SREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   55 SVETYKIYIFRVLKHVHPDIGISSKAMGIMNSFINDIFEKLARESSRLAGYNKKPTISSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 146          
BLAST of EY753550 vs. ExPASy Swiss-Prot
Match: H2B2_WHEAT (Histone H2B.2 OS=Triticum aestivum PE=1 SV=2)

HSP 1 Score: 167.548 bits (423), Expect = 6.121e-41
Identity = 85/91 (93.41%), Postives = 89/91 (97.80%), Query Frame = 3
Query:  216 VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 488
            VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   60 VETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 150          
BLAST of EY753550 vs. ExPASy Swiss-Prot
Match: H2B7_ORYSJ (Histone H2B.7 OS=Oryza sativa subsp. japonica GN=H2B.7 PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.995e-41
Identity = 86/105 (81.90%), Postives = 93/105 (88.57%), Query Frame = 3
Query:  174 GGGVEXXXXXXXXNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 488
            G G +        +VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   49 GEGKKAGRKKGKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 153          
BLAST of EY753550 vs. ExPASy Swiss-Prot
Match: H2B7_ORYSI (Histone H2B.7 OS=Oryza sativa subsp. indica GN=H2B.7 PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.995e-41
Identity = 86/105 (81.90%), Postives = 93/105 (88.57%), Query Frame = 3
Query:  174 GGGVEXXXXXXXXNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 488
            G G +        +VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   49 GEGKKAGRKKGKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 153          
BLAST of EY753550 vs. ExPASy Swiss-Prot
Match: H2B4_ORYSJ (Histone H2B.4 OS=Oryza sativa subsp. japonica GN=H2B.4 PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.995e-41
Identity = 86/105 (81.90%), Postives = 93/105 (88.57%), Query Frame = 3
Query:  174 GGGVEXXXXXXXXNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 488
            G G +        +VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   49 GEGKKAGRKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 153          
BLAST of EY753550 vs. ExPASy Swiss-Prot
Match: H2B4_ORYSI (Histone H2B.4 OS=Oryza sativa subsp. indica GN=H2B.4 PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.995e-41
Identity = 86/105 (81.90%), Postives = 93/105 (88.57%), Query Frame = 3
Query:  174 GGGVEXXXXXXXXNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 488
            G G +        +VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   49 GEGKKAGRKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 153          
BLAST of EY753550 vs. ExPASy Swiss-Prot
Match: H2B10_ORYSJ (Histone H2B.10 OS=Oryza sativa subsp. japonica GN=H2B.10 PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.995e-41
Identity = 86/105 (81.90%), Postives = 93/105 (88.57%), Query Frame = 3
Query:  174 GGGVEXXXXXXXXNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 488
            G G +        +VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   49 GEGKKAGRKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 153          
BLAST of EY753550 vs. ExPASy Swiss-Prot
Match: H2B10_ORYSI (Histone H2B.10 OS=Oryza sativa subsp. indica GN=H2B.10 PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.995e-41
Identity = 86/105 (81.90%), Postives = 93/105 (88.57%), Query Frame = 3
Query:  174 GGGVEXXXXXXXXNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 488
            G G +        +VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   49 GEGKKAGRKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 153          
BLAST of EY753550 vs. ExPASy Swiss-Prot
Match: H2B3_ORYSJ (Histone H2B.3 OS=Oryza sativa subsp. japonica GN=H2B.3 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.044e-40
Identity = 84/92 (91.30%), Postives = 90/92 (97.83%), Query Frame = 3
Query:  213 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 488
            +VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   62 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 153          
BLAST of EY753550 vs. ExPASy Swiss-Prot
Match: H2B3_ORYSI (Histone H2B.3 OS=Oryza sativa subsp. indica GN=H2B.3 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.044e-40
Identity = 84/92 (91.30%), Postives = 90/92 (97.83%), Query Frame = 3
Query:  213 NVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 488
            +VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLA E+++LARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTS+
Sbjct:   62 SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSA 153          
The following BLAST results are available for this feature:
BLAST of EY753550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
H2B_TOBAC6.121e-4192.39Histone H2B OS=Nicotiana tabacum GN=HIS2B PE=2 SV=... [more]
H2B2_WHEAT6.121e-4193.41Histone H2B.2 OS=Triticum aestivum PE=1 SV=2[more]
H2B7_ORYSJ7.995e-4181.90Histone H2B.7 OS=Oryza sativa subsp. japonica GN=H... [more]
H2B7_ORYSI7.995e-4181.90Histone H2B.7 OS=Oryza sativa subsp. indica GN=H2B... [more]
H2B4_ORYSJ7.995e-4181.90Histone H2B.4 OS=Oryza sativa subsp. japonica GN=H... [more]
H2B4_ORYSI7.995e-4181.90Histone H2B.4 OS=Oryza sativa subsp. indica GN=H2B... [more]
H2B10_ORYSJ7.995e-4181.90Histone H2B.10 OS=Oryza sativa subsp. japonica GN=... [more]
H2B10_ORYSI7.995e-4181.90Histone H2B.10 OS=Oryza sativa subsp. indica GN=H2... [more]
H2B3_ORYSJ1.044e-4091.30Histone H2B.3 OS=Oryza sativa subsp. japonica GN=H... [more]
H2B3_ORYSI1.044e-4091.30Histone H2B.3 OS=Oryza sativa subsp. indica GN=H2B... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-B08-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753550 ID=EY753550; Name=EY753550; organism=Citrus sinensis; type=EST; length=714bp
CTAATTTCATTTTCTATCAAATTCAGAAGAATCTTCTCCACGCCCTTCAG
TTTTTCTCGTCAAAAGGAACGATGGCGCCGAAAGCCGAGAAGAAGCCAGC
GGAGAAAAAGCCGGTAGCCGAGAAAGCCCCAGCCGAGAAGAGGCCGAAAG
CTGAGAAGAAGATCTCGAAAGATGGCGGCGGCGTCGAGAAAAAGAAGAGG
AAGTTGAAGAAGAACGTGGAGACGTACAAGATCTACATTTTCAAGGTCCT
GAAGCAGGTTCATCCCGATATCGGTATCTCCAGCAAGGCCATGGGCATCA
TGAACAGTTTCATCAACGATATCTTCGAGAAATTGGCCCAAGAGGCGTCT
CGTCTCGCGAGGTACAACAAGAAGCCGACGATCACGTCGAGGGAGATCCA
GACCGCCGTGAGATTGGTCTTGCCCGGTGAATTGGCCAAGCACGCCGTGT
CGGAGGGGACCAAGGCCGTTACCAAGTTCACGAGCTCTTGATTTTGTGCA
ATTTTTTTGTCTTGTTAGTGTTCCGTGTTCTTTTGAAATTGTTCCTTTTG
TTACTTTTTAGCCGCCCCGCCTAGCCTAGGGTTTGCTCGTGTTAATGCTT
CTTATGGACAGATTAATGAAAACTTATTGTCTTCTAAAATCGNGATCTGA
TTCTCTTTGTGTTCTGATTATTGAAATGGGTATTGGATTTGGTGATTTGA
AAAAAAAAAAAAAA
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