EY753550

Overview
NameEY753550
Unique NameEY753550
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY753550 vs. ExPASy Swiss-Prot
Match: H2B4_ARATH (Histone H2B.4 OS=Arabidopsis thaliana GN=At2g37470 PE=1 SV=3)

HSP 1 Score: 181.8 bits (460), Expect = 3.137e-45
Identity = 93/108 (86.11%), Postives = 97/108 (89.81%), Query Frame = 3 
Query:  162 ISKDGGGVEXXXXXXXXNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 485
            ISKD GG E        +VETYKIYIFKVLKQVHPD+GIS KAMGIMNSFINDIFEKLAQE+S+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS
Sbjct:   31 ISKDAGGSEKKKKKSKKSVETYKIYIFKVLKQVHPDVGISGKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTS 138
[Close]
BLAST of EY753550 vs. ExPASy Swiss-Prot
Match: H2B3_ARATH (Histone H2B.3 OS=Arabidopsis thaliana GN=At2g28720 PE=1 SV=3)

HSP 1 Score: 179.874 bits (455), Expect = 1.192e-44
Identity = 93/104 (89.42%), Postives = 95/104 (91.35%), Query Frame = 3 
Query:  177 GGVEXXXXXXXXNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 488
            GGVE        + ETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEAS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   48 GGVEKKKKRVKKSTETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 151
[Close]
BLAST of EY753550 vs. ExPASy Swiss-Prot
Match: H2B11_ORYSJ (Histone H2B.11 OS=Oryza sativa subsp. japonica GN=H2B.11 PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.557e-44
Identity = 92/108 (85.19%), Postives = 98/108 (90.74%), Query Frame = 3 
Query:  165 SKDGGGVEXXXXXXXXNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 488
            +K+GGG +        +VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQEA+RLARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   32 AKEGGGEKKGKKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 139
[Close]
BLAST of EY753550 vs. ExPASy Swiss-Prot
Match: H2B11_ORYSI (Histone H2B.11 OS=Oryza sativa subsp. indica GN=H2B.11 PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.557e-44
Identity = 92/108 (85.19%), Postives = 98/108 (90.74%), Query Frame = 3 
Query:  165 SKDGGGVEXXXXXXXXNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 488
            +K+GGG +        +VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQEA+RLARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   32 AKEGGGEKKGKKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTKFTSS 139
[Close]
BLAST of EY753550 vs. ExPASy Swiss-Prot
Match: H2B8_ARATH (Histone H2B.8 OS=Arabidopsis thaliana GN=At3g53650 PE=1 SV=3)

HSP 1 Score: 178.718 bits (452), Expect = 2.655e-44
Identity = 93/109 (85.32%), Postives = 98/109 (89.91%), Query Frame = 3 
Query:  162 ISKDGGGVEXXXXXXXXNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 488
            I+K+GG  E        N+ETYKIYIFKVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLPGEL+KHAVSEGTKAVTKFTSS
Sbjct:   31 ITKEGGS-EKKKKKSKKNIETYKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELSKHAVSEGTKAVTKFTSS 138
[Close]
BLAST of EY753550 vs. ExPASy Swiss-Prot
Match: H2B_GOSHI (Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV=3)

HSP 1 Score: 177.948 bits (450), Expect = 4.529e-44
Identity = 94/111 (84.68%), Postives = 98/111 (88.29%), Query Frame = 3 
Query:  162 ISKDGGGV--EXXXXXXXXNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 488
            + K+GG    +        +VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   37 LPKEGGAAAGDKKKKRVKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 147
[Close]
BLAST of EY753550 vs. ExPASy Swiss-Prot
Match: H2B_CAPAN (Histone H2B OS=Capsicum annuum GN=HIS2B PE=2 SV=3)

HSP 1 Score: 177.948 bits (450), Expect = 4.529e-44
Identity = 91/109 (83.49%), Postives = 97/109 (88.99%), Query Frame = 3 
Query:  162 ISKDGGGVEXXXXXXXXNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 488
            + KD G  +        ++ETYKIYIFKVLKQVHPDIGISSK+MGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   37 LPKDAGRPDKKKKRAKKSIETYKIYIFKVLKQVHPDIGISSKSMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 145
[Close]
BLAST of EY753550 vs. ExPASy Swiss-Prot
Match: H2B1_MEDTR (Probable histone H2B.1 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 177.948 bits (450), Expect = 4.529e-44
Identity = 94/111 (84.68%), Postives = 98/111 (88.29%), Query Frame = 3 
Query:  162 ISKDGGGV--EXXXXXXXXNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 488
            + K+GG    E        +VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   38 LPKEGGSAAGEKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 148
[Close]
BLAST of EY753550 vs. ExPASy Swiss-Prot
Match: H2B3_SOLLC (Histone H2B.3 (Fragment) OS=Solanum lycopersicum GN=H2B-3 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 5.915e-44
Identity = 93/109 (85.32%), Postives = 95/109 (87.16%), Query Frame = 3 
Query:  162 ISKDGGGVEXXXXXXXXNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 488
            + KD    +         VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   29 LPKDAAAGDKKKKRSKKAVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 137
[Close]
BLAST of EY753550 vs. ExPASy Swiss-Prot
Match: H2B11_ARATH (Histone H2B.11 OS=Arabidopsis thaliana GN=At5g59910 PE=1 SV=5)

HSP 1 Score: 177.563 bits (449), Expect = 5.915e-44
Identity = 92/105 (87.62%), Postives = 95/105 (90.48%), Query Frame = 3 
Query:  174 GGGVEXXXXXXXXNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 488
            G G +        +VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEAS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS
Sbjct:   46 GAGGDKKKKMKKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS 150
The following BLAST results are available for this feature:
BLAST of EY753550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
H2B4_ARATH3.137e-4586.11Histone H2B.4 OS=Arabidopsis thaliana GN=At2g37470... [more]
H2B3_ARATH1.192e-4489.42Histone H2B.3 OS=Arabidopsis thaliana GN=At2g28720... [more]
H2B11_ORYSJ1.557e-4485.19Histone H2B.11 OS=Oryza sativa subsp. japonica GN=... [more]
H2B11_ORYSI1.557e-4485.19Histone H2B.11 OS=Oryza sativa subsp. indica GN=H2... [more]
H2B8_ARATH2.655e-4485.32Histone H2B.8 OS=Arabidopsis thaliana GN=At3g53650... [more]
H2B_GOSHI4.529e-4484.68Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV... [more]
H2B_CAPAN4.529e-4483.49Histone H2B OS=Capsicum annuum GN=HIS2B PE=2 SV=3[more]
H2B1_MEDTR4.529e-4484.68Probable histone H2B.1 OS=Medicago truncatula PE=3... [more]
H2B3_SOLLC5.915e-4485.32Histone H2B.3 (Fragment) OS=Solanum lycopersicum G... [more]
H2B11_ARATH5.915e-4487.62Histone H2B.11 OS=Arabidopsis thaliana GN=At5g5991... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-004-B08-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753550 ID=EY753550; Name=EY753550; organism=Citrus sinensis; type=EST; length=714bp
CTAATTTCATTTTCTATCAAATTCAGAAGAATCTTCTCCACGCCCTTCAG
TTTTTCTCGTCAAAAGGAACGATGGCGCCGAAAGCCGAGAAGAAGCCAGC
GGAGAAAAAGCCGGTAGCCGAGAAAGCCCCAGCCGAGAAGAGGCCGAAAG
CTGAGAAGAAGATCTCGAAAGATGGCGGCGGCGTCGAGAAAAAGAAGAGG
AAGTTGAAGAAGAACGTGGAGACGTACAAGATCTACATTTTCAAGGTCCT
GAAGCAGGTTCATCCCGATATCGGTATCTCCAGCAAGGCCATGGGCATCA
TGAACAGTTTCATCAACGATATCTTCGAGAAATTGGCCCAAGAGGCGTCT
CGTCTCGCGAGGTACAACAAGAAGCCGACGATCACGTCGAGGGAGATCCA
GACCGCCGTGAGATTGGTCTTGCCCGGTGAATTGGCCAAGCACGCCGTGT
CGGAGGGGACCAAGGCCGTTACCAAGTTCACGAGCTCTTGATTTTGTGCA
ATTTTTTTGTCTTGTTAGTGTTCCGTGTTCTTTTGAAATTGTTCCTTTTG
TTACTTTTTAGCCGCCCCGCCTAGCCTAGGGTTTGCTCGTGTTAATGCTT
CTTATGGACAGATTAATGAAAACTTATTGTCTTCTAAAATCGNGATCTGA
TTCTCTTTGTGTTCTGATTATTGAAATGGGTATTGGATTTGGTGATTTGA
AAAAAAAAAAAAAA
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