EY720100
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.414e-43 Identity = 45/52 (86.54%), Postives = 47/52 (90.38%), Query Frame = 1 Query: 343 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498 WYGPDRVKYLGPFS + PSYLTGEFP DYGWDTAGLSADPE FA+NR LEVI Sbjct: 51 WYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVI 102 HSP 2 Score: 94.3597 bits (233), Expect = 1.414e-43 Identity = 54/102 (52.94%), Postives = 64/102 (62.75%), Query Frame = 2 Query: 584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWD-PGXPHGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886 VIH RWAMLGALGC+ PE+ + + F E VWFKAGAQIFSEG LDYLGNP+L ++ W GA G+R+ G P+ E PL FDPLGL Sbjct: 101 VIHCRWAMLGALGCVFPELFAR-NGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGL 201
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.414e-43 Identity = 47/53 (88.68%), Postives = 48/53 (90.57%), Query Frame = 1 Query: 340 LWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498 +WYG DR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FARNR LEVI Sbjct: 48 IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVI 100 HSP 2 Score: 92.8189 bits (229), Expect = 1.414e-43 Identity = 53/102 (51.96%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWDPGXP-HGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886 VIH RWAMLGALGC+ PE+L K V F E VWFKAG+QIFSEG LDYLGNP L ++ W G G+R+ G P+ E + FDPLGL Sbjct: 99 VIHCRWAMLGALGCVFPEILSK-NGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 199
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.417e-43 Identity = 47/53 (88.68%), Postives = 48/53 (90.57%), Query Frame = 1 Query: 340 LWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498 +WYG DR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FARNR LEVI Sbjct: 20 IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVI 72 HSP 2 Score: 92.8189 bits (229), Expect = 1.417e-43 Identity = 53/102 (51.96%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSW-DPGXPHGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886 VIH RWAMLGALGC+ PE+L K V F E VWFKAG+QIFSEG LDYLGNP L ++ W G G+R+ G P+ E + FDPLGL Sbjct: 71 VIHCRWAMLGALGCVFPEILSK-NGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 171
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.843e-43 Identity = 44/52 (84.62%), Postives = 46/52 (88.46%), Query Frame = 1 Query: 343 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498 WYGPDRV YLGP S + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVI Sbjct: 49 WYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 100 HSP 2 Score: 97.0561 bits (240), Expect = 1.843e-43 Identity = 55/102 (53.92%), Postives = 65/102 (63.73%), Query Frame = 2 Query: 584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWD-PGXPHGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886 VIH RWAMLGALGC+ PE+L + V F E VWFKAG+QIFSEG LDYLGNP+L ++ W GA G+R+ G P+ E PL FDPLGL Sbjct: 99 VIHSRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVVDPLYPGGTFDPLGL 199
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.130e-43 Identity = 47/53 (88.68%), Postives = 48/53 (90.57%), Query Frame = 1 Query: 340 LWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498 +WYG DR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FARNR LEVI Sbjct: 48 IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVI 100 HSP 2 Score: 91.6633 bits (226), Expect = 3.130e-43 Identity = 53/102 (51.96%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWD-PGXPHGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886 VIH RWAMLGALGC+ PE+L K V F E VWFKAG+QIFSEG LDYLGNP L ++ W G G+R+ G P+ E + FDPLGL Sbjct: 99 VIHCRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 199
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.130e-43 Identity = 44/52 (84.62%), Postives = 46/52 (88.46%), Query Frame = 1 Query: 343 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498 WYGPDRV YLGP S + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVI Sbjct: 49 WYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 100 HSP 2 Score: 96.2857 bits (238), Expect = 3.130e-43 Identity = 56/102 (54.90%), Postives = 65/102 (63.73%), Query Frame = 2 Query: 584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWD-PGXPHGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886 VIH RWAMLGALGC+ PE+L + V F E VWFKAG+QIFSEG LDYLGNP+L ++ W GA G+RI G P+ E PL FDPLGL Sbjct: 99 VIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL 199
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 5.318e-43 Identity = 56/107 (52.34%), Postives = 65/107 (60.75%), Query Frame = 2 Query: 569 YFNL*VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWDPGXP-HGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886 Y L VIH RWA+LGALG +TPE+L + V F EPVWFKAGAQIFSEG LDYLG+P L + + G G+R+NG P E PL FDPLGL Sbjct: 84 YRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGL 190 HSP 2 Score: 97.8265 bits (242), Expect = 5.318e-43 Identity = 42/52 (80.77%), Postives = 45/52 (86.54%), Query Frame = 1 Query: 343 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498 WYGPDR K+LGPFS TP+YLTGEFPGDYGWDTAGLSADPE F + R LEVI Sbjct: 39 WYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVI 90
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 6.934e-43 Identity = 47/58 (81.03%), Postives = 49/58 (84.48%), Query Frame = 1 Query: 325 VQGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498 V WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVI Sbjct: 23 VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 80 HSP 2 Score: 89.7373 bits (221), Expect = 6.934e-43 Identity = 52/102 (50.98%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSW-DPGXPHGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886 VIH RWAMLGALGC+ PE+L + V F E WFKAG+QIFSEG LDYLGN +L ++ W GA G+RI G P+ E P+ FDPL L Sbjct: 79 VIHSRWAMLGALGCVFPELLAR-NGVKFGEASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLAL 179
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 9.024e-43 Identity = 47/58 (81.03%), Postives = 49/58 (84.48%), Query Frame = 1 Query: 325 VQGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498 V WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVI Sbjct: 45 VSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 102 HSP 2 Score: 88.9669 bits (219), Expect = 9.024e-43 Identity = 52/102 (50.98%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWD-PGXPHGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886 VIH RWAMLGALGC+ PE+ + V F E VW KAG+QIFSEG LDYLGNP+L ++ W GA G+R+ G P+ PL FDPLGL Sbjct: 101 VIHCRWAMLGALGCVFPELFAR-NGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDPLYPGGSFDPLGL 201
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 9.024e-43 Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 1 Query: 343 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498 WYG DRVKYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPE FARNR LEVI Sbjct: 50 WYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVI 101 HSP 2 Score: 90.8929 bits (224), Expect = 9.024e-43 Identity = 54/103 (52.43%), Postives = 65/103 (63.11%), Query Frame = 2 Query: 584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSW-DPGXPHGAR*GFRINGL-PVSEKEQPLPGCXYFDPLGL 886 VIH RWAMLGALGC+ PE+L + V F E VWFKAG+QIFS+G LDYLGNP+L ++ W GA G+R+ G P+ E E L FDPLGL Sbjct: 100 VIHSRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGL 201 The following BLAST results are available for this feature:
BLAST of EY720100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >EY720100 ID=EY720100; Name=EY720100; organism=Citrus sinensis; type=EST; length=895bpback to top |