EY720100

Overview
NameEY720100
Unique NameEY720100
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length895
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.414e-43
Identity = 45/52 (86.54%), Postives = 47/52 (90.38%), Query Frame = 1
Query:  343 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498
            WYGPDRVKYLGPFS + PSYLTGEFP DYGWDTAGLSADPE FA+NR LEVI
Sbjct:   51 WYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVI 102          

HSP 2 Score: 94.3597 bits (233), Expect = 1.414e-43
Identity = 54/102 (52.94%), Postives = 64/102 (62.75%), Query Frame = 2
Query:  584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWD-PGXPHGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886
            VIH RWAMLGALGC+ PE+  +   + F E VWFKAGAQIFSEG LDYLGNP+L   ++    W       GA  G+R+ G P+ E   PL     FDPLGL
Sbjct:  101 VIHCRWAMLGALGCVFPELFAR-NGIKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGL 201          
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB26_PETSP (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. GN=CAB37 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.414e-43
Identity = 47/53 (88.68%), Postives = 48/53 (90.57%), Query Frame = 1
Query:  340 LWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498
            +WYG DR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FARNR LEVI
Sbjct:   48 IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVI 100          

HSP 2 Score: 92.8189 bits (229), Expect = 1.414e-43
Identity = 53/102 (51.96%), Postives = 62/102 (60.78%), Query Frame = 2
Query:  584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWDPGXP-HGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886
            VIH RWAMLGALGC+ PE+L K   V F E VWFKAG+QIFSEG LDYLGNP L   ++    W       G   G+R+ G P+ E    +     FDPLGL
Sbjct:   99 VIHCRWAMLGALGCVFPEILSK-NGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 199          
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB25_SOLLC (Chlorophyll a-b binding protein 5, chloroplastic (Fragment) OS=Solanum lycopersicum GN=CAB5 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.417e-43
Identity = 47/53 (88.68%), Postives = 48/53 (90.57%), Query Frame = 1
Query:  340 LWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498
            +WYG DR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FARNR LEVI
Sbjct:   20 IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVI 72          

HSP 2 Score: 92.8189 bits (229), Expect = 1.417e-43
Identity = 53/102 (51.96%), Postives = 62/102 (60.78%), Query Frame = 2
Query:  584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSW-DPGXPHGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886
            VIH RWAMLGALGC+ PE+L K   V F E VWFKAG+QIFSEG LDYLGNP L   ++    W       G   G+R+ G P+ E    +     FDPLGL
Sbjct:   71 VIHCRWAMLGALGCVFPEILSK-NGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 171          
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.843e-43
Identity = 44/52 (84.62%), Postives = 46/52 (88.46%), Query Frame = 1
Query:  343 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498
            WYGPDRV YLGP S + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVI
Sbjct:   49 WYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 100          

HSP 2 Score: 97.0561 bits (240), Expect = 1.843e-43
Identity = 55/102 (53.92%), Postives = 65/102 (63.73%), Query Frame = 2
Query:  584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWD-PGXPHGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886
            VIH RWAMLGALGC+ PE+L +   V F E VWFKAG+QIFSEG LDYLGNP+L   ++    W       GA  G+R+ G P+ E   PL     FDPLGL
Sbjct:   99 VIHSRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEGYRVAGGPLGEVVDPLYPGGTFDPLGL 199          
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB24_SOLLC (Chlorophyll a-b binding protein 4, chloroplastic OS=Solanum lycopersicum GN=CAB4 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.130e-43
Identity = 47/53 (88.68%), Postives = 48/53 (90.57%), Query Frame = 1
Query:  340 LWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498
            +WYG DR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FARNR LEVI
Sbjct:   48 IWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVI 100          

HSP 2 Score: 91.6633 bits (226), Expect = 3.130e-43
Identity = 53/102 (51.96%), Postives = 62/102 (60.78%), Query Frame = 2
Query:  584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWD-PGXPHGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886
            VIH RWAMLGALGC+ PE+L K   V F E VWFKAG+QIFSEG LDYLGNP L   ++    W       G   G+R+ G P+ E    +     FDPLGL
Sbjct:   99 VIHCRWAMLGALGCVFPEILSK-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDKIYPGGAFDPLGL 199          
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 3.130e-43
Identity = 44/52 (84.62%), Postives = 46/52 (88.46%), Query Frame = 1
Query:  343 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498
            WYGPDRV YLGP S + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVI
Sbjct:   49 WYGPDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 100          

HSP 2 Score: 96.2857 bits (238), Expect = 3.130e-43
Identity = 56/102 (54.90%), Postives = 65/102 (63.73%), Query Frame = 2
Query:  584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWD-PGXPHGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886
            VIH RWAMLGALGC+ PE+L +   V F E VWFKAG+QIFSEG LDYLGNP+L   ++    W       GA  G+RI G P+ E   PL     FDPLGL
Sbjct:   99 VIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL 199          
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.318e-43
Identity = 56/107 (52.34%), Postives = 65/107 (60.75%), Query Frame = 2
Query:  569 YFNL*VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWDPGXP-HGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886
            Y  L VIH RWA+LGALG +TPE+L  +  V F EPVWFKAGAQIFSEG LDYLG+P L   +    +        G   G+R+NG P  E   PL     FDPLGL
Sbjct:   84 YRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGL 190          

HSP 2 Score: 97.8265 bits (242), Expect = 5.318e-43
Identity = 42/52 (80.77%), Postives = 45/52 (86.54%), Query Frame = 1
Query:  343 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498
            WYGPDR K+LGPFS  TP+YLTGEFPGDYGWDTAGLSADPE F + R LEVI
Sbjct:   39 WYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVI 90          
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB21_SOYBN (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 6.934e-43
Identity = 47/58 (81.03%), Postives = 49/58 (84.48%), Query Frame = 1
Query:  325 VQGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498
            V     WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVI
Sbjct:   23 VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 80          

HSP 2 Score: 89.7373 bits (221), Expect = 6.934e-43
Identity = 52/102 (50.98%), Postives = 62/102 (60.78%), Query Frame = 2
Query:  584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSW-DPGXPHGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886
            VIH RWAMLGALGC+ PE+L +   V F E  WFKAG+QIFSEG LDYLGN +L   ++    W       GA  G+RI G P+ E   P+     FDPL L
Sbjct:   79 VIHSRWAMLGALGCVFPELLAR-NGVKFGEASWFKAGSQIFSEGGLDYLGNQSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLAL 179          
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 9.024e-43
Identity = 47/58 (81.03%), Postives = 49/58 (84.48%), Query Frame = 1
Query:  325 VQGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498
            V     WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVI
Sbjct:   45 VSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 102          

HSP 2 Score: 88.9669 bits (219), Expect = 9.024e-43
Identity = 52/102 (50.98%), Postives = 62/102 (60.78%), Query Frame = 2
Query:  584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWD-PGXPHGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886
            VIH RWAMLGALGC+ PE+  +   V F E VW KAG+QIFSEG LDYLGNP+L   ++    W       GA  G+R+ G P+     PL     FDPLGL
Sbjct:  101 VIHCRWAMLGALGCVFPELFAR-NGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYRVAGGPLGVVVDPLYPGGSFDPLGL 201          
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB22_ARATH (Chlorophyll a-b binding protein 2, chloroplastic OS=Arabidopsis thaliana GN=CAB2A PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 9.024e-43
Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 1
Query:  343 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498
            WYG DRVKYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPE FARNR LEVI
Sbjct:   50 WYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVI 101          

HSP 2 Score: 90.8929 bits (224), Expect = 9.024e-43
Identity = 54/103 (52.43%), Postives = 65/103 (63.11%), Query Frame = 2
Query:  584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSW-DPGXPHGAR*GFRINGL-PVSEKEQPLPGCXYFDPLGL 886
            VIH RWAMLGALGC+ PE+L +   V F E VWFKAG+QIFS+G LDYLGNP+L   ++    W       GA  G+R+ G  P+ E E  L     FDPLGL
Sbjct:  100 VIHSRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGL 201          
The following BLAST results are available for this feature:
BLAST of EY720100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
CB23_PETSP1.414e-4386.54Chlorophyll a-b binding protein 22R, chloroplastic... [more]
CB26_PETSP1.414e-4388.68Chlorophyll a-b binding protein 37, chloroplastic ... [more]
CB25_SOLLC1.417e-4388.68Chlorophyll a-b binding protein 5, chloroplastic (... [more]
CB29_MAIZE1.843e-4384.62Chlorophyll a-b binding protein M9, chloroplastic ... [more]
CB24_SOLLC3.130e-4388.68Chlorophyll a-b binding protein 4, chloroplastic O... [more]
CB22_MAIZE3.130e-4384.62Chlorophyll a-b binding protein, chloroplastic OS=... [more]
CB2_CHLMO5.318e-4352.34Chlorophyll a-b binding protein of LHCII type I, c... [more]
CB21_SOYBN6.934e-4381.03Chlorophyll a-b binding protein, chloroplastic (Fr... [more]
CB22_PETSP9.024e-4381.03Chlorophyll a-b binding protein 22L, chloroplastic... [more]
CB22_ARATH9.024e-4388.46Chlorophyll a-b binding protein 2, chloroplastic O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-002-A07-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720100 ID=EY720100; Name=EY720100; organism=Citrus sinensis; type=EST; length=895bp
CACCCACGCGTCCGATCTCTCTTTCTGTATTGTCTTCAGACACATATTAA
CATCACAGTTCCAACCGACACAACATCCATAATAACAACTCTCAGGACAA
TGGCATCAATAATGGCGGCTGCTACTGCTAGCTCTAGCACTTCTCTTAGG
GCAACCCCATTTCTTGGCCAGAGTAGGACAACTGCTAACGCTCTAAAAGA
TGTTGTTCCGATGGGGAATGCCAAGTACACAATGGTAATAAGTTGGTAAC
CTTAACCTACACCTTCAGCCTTTTTGTCTCTCTTTGTCTCTGTGTTTAGG
GAAATTCATTGAAGATATTGTTGTGTTCAGGGAAATGAACTGTGGTATGG
GCCAGACAGGGTGAAGTACTTGGGACCCTTTTCAGCACAGACTCCATCAT
ACTTGACTGGAGAGTTTCCAGGTGACTATGGATGGGACACTGCTGGTTTG
TCTGCTGATCCCGAGGCCTTTGCCAGGAACAGGGCTCTTGAGGTGATATT
CTTTCCTTCTTATTCTTGCCCTCTGTCGGCTGGTAATGTGGTTACAGCAA
CAAAGATATTGATACTACTATTTCAATTTGTAGGTGATCCATGGCAGGTG
GGCTATGCTTGGAGCACTAGGCTGCATCACCCCTGAAGTTCTCGAGAAAT
GGCTTAAAGTAGACTTCAAGGAACCGGTTTGGTTCAAAGCTGGAGCTCAG
ATTTTCTCAGAAGGGTGGCTTGACTACTTGGGAAACCCAACCTTGTTCAT
GCTCAAAGCATTCTGGCTGTCCTGGGATCCAGGTNGTCCTCATGGGGCTC
GTTGAGGGTTCCGTATCAATGGCCTCCCTGTGTCCGAAAAGGAACAACCT
CTACCCGGTTGCCANTATTTTGATCCCCTGGGCCTGCTGATAACC
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