EY720100
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB21_ARATH (Chlorophyll a-b binding protein 165/180, chloroplastic OS=Arabidopsis thaliana GN=LHCP-A PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 9.024e-43 Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 1 Query: 343 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498 WYG DRVKYLGPFS ++PSYLTGEFPGDYGWDTAGLSADPE FARNR LEVI Sbjct: 50 WYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVI 101 HSP 2 Score: 90.8929 bits (224), Expect = 9.024e-43 Identity = 54/103 (52.43%), Postives = 65/103 (63.11%), Query Frame = 2 Query: 584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSW-DPGXPHGAR*GFRINGL-PVSEKEQPLPGCXYFDPLGL 886 VIH RWAMLGALGC+ PE+L + V F E VWFKAG+QIFS+G LDYLGNP+L ++ W GA G+R+ G P+ E E L FDPLGL Sbjct: 100 VIHSRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGNGPLGEAEDLLYPGGSFDPLGL 201
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 9.025e-43 Identity = 43/52 (82.69%), Postives = 45/52 (86.54%), Query Frame = 1 Query: 343 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498 WYG DRV YLGP S + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVI Sbjct: 49 WYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 100 HSP 2 Score: 97.8265 bits (242), Expect = 9.025e-43 Identity = 56/102 (54.90%), Postives = 65/102 (63.73%), Query Frame = 2 Query: 584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWDPGXP-HGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886 VIH RWAMLGALGC+ PE+L + V F E VWFKAG+QIFSEG LDYLGNP+L ++ W GA G+RI G P+ E PL FDPLGL Sbjct: 99 VIHSRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGAFDPLGL 199
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 9.027e-43 Identity = 43/52 (82.69%), Postives = 45/52 (86.54%), Query Frame = 1 Query: 343 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498 WYG DRV YLGP S + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVI Sbjct: 45 WYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 96 HSP 2 Score: 97.8265 bits (242), Expect = 9.027e-43 Identity = 56/102 (54.90%), Postives = 65/102 (63.73%), Query Frame = 2 Query: 584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWDPGXP-HGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886 VIH RWAMLGALGC+ PE+L + V F E VWFKAG+QIFSEG LDYLGNP+L ++ W GA G+RI G P+ E PL FDPLGL Sbjct: 95 VIHSRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGL 195
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.532e-42 Identity = 46/58 (79.31%), Postives = 48/58 (82.76%), Query Frame = 1 Query: 325 VQGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498 V WYGPDRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADP FA+NR LEVI Sbjct: 44 VSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVI 101 HSP 2 Score: 90.5077 bits (223), Expect = 1.532e-42 Identity = 52/102 (50.98%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWD-PGXPHGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886 VIH RW MLGALGC+ PE+ + V F E VWFKAG+QIF EG LDYLGNP+L ++ W GA G+R+ G P+ E PL FDPLGL Sbjct: 100 VIHCRWTMLGALGCVFPELFAR-NGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRVAGGPLGEVIDPLYPGGSFDPLGL 200
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.532e-42 Identity = 46/52 (88.46%), Postives = 47/52 (90.38%), Query Frame = 1 Query: 343 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498 WYG DRVKYLGPFS + PSYLTGEFPGDYGWDTAGLSADPE FARNR LEVI Sbjct: 49 WYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVI 100 HSP 2 Score: 90.8929 bits (224), Expect = 1.532e-42 Identity = 55/103 (53.40%), Postives = 65/103 (63.11%), Query Frame = 2 Query: 584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSW-DPGXPHGAR*GFRINGL-PVSEKEQPLPGCXYFDPLGL 886 VIH RWAMLGALGC+ PE+L + V F E VWFKAG+QIFSEG LDYLGNP+L ++ W GA G+R+ G P+ E E L FDPLGL Sbjct: 99 VIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEGPLGEAEDLLYPGGSFDPLGL 200
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB21_PINTH (Chlorophyll a-b binding protein type I, chloroplastic OS=Pinus thunbergii PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.659e-41 Identity = 44/53 (83.02%), Postives = 47/53 (88.68%), Query Frame = 1 Query: 340 LWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498 +WYGPDR KYLGPFS TPSYLTGEFPGDYGWDTA +SADPE FA+NR LEVI Sbjct: 49 IWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSADPETFAKNRELEVI 101 HSP 2 Score: 90.1225 bits (222), Expect = 1.659e-41 Identity = 53/102 (51.96%), Postives = 61/102 (59.80%), Query Frame = 2 Query: 584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWD-PGXPHGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886 VIH RWAMLGALGC+ PE+L K + F E VWFKAGAQIFSEG LDY GNP L ++ W G G+R+ G + E PL FDPLGL Sbjct: 100 VIHCRWAMLGALGCVFPELLAK-NGLKFGEAVWFKAGAQIFSEGGLDYAGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGTLGEGLDPLLPGGAFDPLGL 200
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.671e-41 Identity = 44/58 (75.86%), Postives = 47/58 (81.03%), Query Frame = 1 Query: 325 VQGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498 V + WYG DRV YLGP S + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVI Sbjct: 44 VSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 101 HSP 2 Score: 91.6633 bits (226), Expect = 3.671e-41 Identity = 54/102 (52.94%), Postives = 64/102 (62.75%), Query Frame = 2 Query: 584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWD-PGXPHGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886 VIH RWAMLGALGC+ PE+L + V F E WFKAG+QIFS+G LDYLGNP+L ++ W GA G+RI G P+ E PL FDPLGL Sbjct: 100 VIHCRWAMLGALGCVFPELLAR-NGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGL 200
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 4.653e-38 Identity = 58/107 (54.21%), Postives = 64/107 (59.81%), Query Frame = 2 Query: 569 YFNL*VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLK-AFWLSWDPGXPHGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886 Y L +IH RWAMLGALGC TPE+L K F E VWFKAGAQIFSEG LDYLGNP+L + S G G+R+NG P E PL FDPLGL Sbjct: 82 YRELELIHARWAMLGALGCQTPELLAK-SGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYRVNGGPAGEGLDPLYPGESFDPLGL 187 HSP 2 Score: 85.8853 bits (211), Expect = 4.653e-38 Identity = 39/53 (73.58%), Postives = 45/53 (84.91%), Query Frame = 1 Query: 343 WYGPDRVKYLGPFSAQ-TPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498 +YGP+R K+LGP+S TP+YLTGEFPGDYGWDTAGLSADPE F R R LE+I Sbjct: 36 FYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELI 88
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.894e-36 Identity = 54/102 (52.94%), Postives = 64/102 (62.75%), Query Frame = 2 Query: 584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWD-PGXPHGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886 VIH WAMLGALGC+ PE+L + V F E VWFKAG+QIFSEG LDYLGNP+L ++ W GA G+RI G P+ E P+ FDPLGL Sbjct: 40 VIHSTWAMLGALGCVFPELLSR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGL 140 HSP 2 Score: 79.7221 bits (195), Expect = 1.894e-36 Identity = 35/41 (85.37%), Postives = 37/41 (90.24%), Query Frame = 1 Query: 376 PFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498 PFS + PSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVI Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 41
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB22_SOYBN (Chlorophyll a-b binding protein 2, chloroplastic OS=Glycine max GN=CAB2 PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 3.201e-36 Identity = 55/102 (53.92%), Postives = 65/102 (63.73%), Query Frame = 2 Query: 584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSW-DPGXPHGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886 VIH RWAMLGALGC+ PE+L + V F E VWFKAG+QIFSEG LDYLGNP+L ++ W GA G+RI G P+ E P+ FDPLGL Sbjct: 90 VIHSRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGL 190 HSP 2 Score: 76.2554 bits (186), Expect = 3.201e-36 Identity = 38/58 (65.52%), Postives = 40/58 (68.97%), Query Frame = 1 Query: 325 VQGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498 V WYGPDRVKYLGPFS + PSYLTGEF GLSADPE FA+NR LEVI Sbjct: 42 VSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF--------HGLSADPETFAKNRELEVI 91 The following BLAST results are available for this feature:
BLAST of EY720100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >EY720100 ID=EY720100; Name=EY720100; organism=Citrus sinensis; type=EST; length=895bpback to top |