EY720100
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 4.503e-35 Identity = 40/53 (75.47%), Postives = 45/53 (84.91%), Query Frame = 1 Query: 343 WYGPDRVKYLGPFSAQ-TPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498 +YGPDR K+LGPFS TP YLTGEFPGDYGWDTAGLSADP+ FAR R +E+I Sbjct: 33 FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELI 85 HSP 2 Score: 80.8777 bits (198), Expect = 4.503e-35 Identity = 36/59 (61.02%), Postives = 47/59 (79.66%), Query Frame = 2 Query: 569 YFNL*VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTL 745 Y + +IH RWA+LGALG +TPE+L ++ V F EPVWFKAGAQIF++G L+YLGN +L Sbjct: 79 YREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESL 137
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB48_MAIZE (Chlorophyll a-b binding protein 48, chloroplastic OS=Zea mays GN=CAB48 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 9.944e-35 Identity = 42/52 (80.77%), Postives = 43/52 (82.69%), Query Frame = 1 Query: 343 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498 WYG DRV YLGP S PSYLTGEFPGDYGWDT GLSADPE FA+NR LEVI Sbjct: 48 WYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGLSADPETFAKNRELEVI 99 HSP 2 Score: 73.559 bits (179), Expect = 9.944e-35 Identity = 46/102 (45.10%), Postives = 58/102 (56.86%), Query Frame = 2 Query: 584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWD-PGXPHGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886 VIH RWA+ LGC+ PE+L + V F E VWFKAG+QIFSEG L + GNP+L ++ W GA G+ + G + E PL FDPLGL Sbjct: 98 VIHCRWAIAVGLGCVFPELLAR-NGVKFGEGVWFKAGSQIFSEGGLSHPGNPSLVHAQSILAIWACQVVLMGAVEGYHVAGGRLGEVVDPLYLGGSFDPLGL 198
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.487e-27 Identity = 90/207 (43.48%), Postives = 102/207 (49.28%), Query Frame = 1 Query: 154 TPFL-GQSRT-TANALKDVVPMGNAKYTMVISW*P*PTPSAFLSLFVSVFREIH*RYCCVQGNELWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIFFPSYSCPLSAGNVVTATKILILLFQFVGDPWQVGYAWSTRLHHP*SSREMA*SRLQGTGLVQSWSSDFLRRVA*LLGKPNLVHAQSILA 768 TPFL GQ R +A+ L+D+ N + TM GN+LWYGPDRVKYLGPFSAQTPSYL GEFPGDYGWDTAGLSADPEAFARNRALEVI L A L +F V W VG + + G+ + D+ LG PNLVHAQSILA Sbjct: 17 TPFLSGQGRAASASPLRDIAAATNGRITM--------------------------------GNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIH--GRWAMLGA---------LGCVFPEVLQKW-VGVEFKEPVWFK-----------AGSQIFSEGGLDY-------LGNPNLVHAQSILA 161 HSP 2 Score: 119.398 bits (298), Expect = 2.805e-26 Identity = 64/103 (62.14%), Postives = 72/103 (69.90%), Query Frame = 2 Query: 584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFW-LSWDPGXPHGAR*GFRINGLP-VSEKEQPLPGCXYFDPLGL 886 VIHGRWAMLGALGC+ PEVL+KW+ V+FKEPVWFKAG+QIFSEG LDYLGNP L ++ + G GFRINGL V E PG YFDPLGL Sbjct: 100 VIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPLGL 202
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.498e-25 Identity = 46/108 (42.59%), Postives = 60/108 (55.56%), Query Frame = 2 Query: 569 YFNL*VIHGRWAMLGALGCITPEVLEKWLKVDFKEP-VWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWDPGXP-HGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886 Y L +IH R +LGALG +TPE+L + F + +WFKAGA IF +G L+YLGNP+L + + G G+R+NG P E PL FDPLGL Sbjct: 101 YRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNGGPAGEGLDPLYPGEAFDPLGL 208 HSP 2 Score: 63.5438 bits (153), Expect = 2.498e-25 Identity = 32/52 (61.54%), Postives = 34/52 (65.38%), Query Frame = 1 Query: 343 WYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498 +YGPD Q P TGEFPGDYGWDTAGLSADPE F R R LE+I Sbjct: 57 FYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELI 107
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 6.467e-23 Identity = 68/143 (47.55%), Postives = 75/143 (52.45%), Query Frame = 1 Query: 340 LWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIFFPSYSCPLSAGNVVTATKILILLFQFVGDPWQVGYAWSTRLHHP*SSREMA*SRLQGTGLVQSWSSDFLRRVA*LLGKPNLVHAQSILA 768 +WYGPDR KYLGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVI L A V + +F W G+ + Q D+ LG PNLVHAQSILA Sbjct: 47 IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH--CRWAMLGALGCVFPELLAKNGVKFGEAVWFKA----------------------GSQIFQEGGLDY-------LGNPNLVHAQSILA 158 HSP 2 Score: 92.0485 bits (227), Expect = 4.796e-18 Identity = 54/102 (52.94%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWD-PGXPHGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886 VIH RWAMLGALGC+ PE+L K V F E VWFKAG+QIF EG LDYLGNP L ++ W GA G+R+ G P+ E L FDPLGL Sbjct: 98 VIHCRWAMLGALGCVFPELLAK-NGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLYPGGAFDPLGL 198
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.220e-21 Identity = 66/143 (46.15%), Postives = 73/143 (51.05%), Query Frame = 1 Query: 340 LWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIFFPSYSCPLSAGNVVTATKILILLFQFVGDPWQVGYAWSTRLHHP*SSREMA*SRLQGTGLVQSWSSDFLRRVA*LLGKPNLVHAQSILA 768 +WYG DR K+LGPFS QTPSYLTGEFPGDYGWDTAGLSADPE FA+NR LEVI S L A + + QF W G + D+ LG PNLVHAQSILA Sbjct: 47 IWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH--SRWAMLGALGCIFPELLSKNGVQFGEAVWFKA----------------------GAQIFSEGGLDY-------LGNPNLVHAQSILA 158 HSP 2 Score: 98.9821 bits (245), Expect = 3.923e-20 Identity = 57/102 (55.88%), Postives = 63/102 (61.76%), Query Frame = 2 Query: 584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWDPGXP-HGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886 VIH RWAMLGALGCI PE+L K V F E VWFKAGAQIFSEG LDYLGNP L ++ W G G+R+ G P+ E PL FDPLGL Sbjct: 98 VIHSRWAMLGALGCIFPELLSK-NGVQFGEAVWFKAGAQIFSEGGLDYLGNPNLVHAQSILAIWATQVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGL 198
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB23_POLMU (Chlorophyll a-b binding protein type 1 member F3, chloroplastic OS=Polystichum munitum GN=CABF3 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.905e-21 Identity = 56/102 (54.90%), Postives = 67/102 (65.69%), Query Frame = 2 Query: 584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWD-PGXPHGAR*GFRINGLPVSEKEQPLPGCXYFDPLGL 886 VIH RWAMLGALGC+TPE+L K V F E VWFKAG+QIF+EG LDYLGNP+L ++ W GA G+R+ G P+ E E P+ FDPLGL Sbjct: 99 VIHSRWAMLGALGCVTPELLAK-NGVKFGEAVWFKAGSQIFAEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRVAGGPLGEVEDPIYPGGSFDPLGL 199 HSP 2 Score: 97.4413 bits (241), Expect = 1.141e-19 Identity = 63/143 (44.06%), Postives = 71/143 (49.65%), Query Frame = 1 Query: 340 LWYGPDRVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIFFPSYSCPLSAGNVVTATKILILLFQFVGDPWQVGYAWSTRLHHP*SSREMA*SRLQGTGLVQSWSSDFLRRVA*LLGKPNLVHAQSILA 768 +WYG DR YLGPFS PSYL+GEFPGDYGWDTAGLSADPE FA+NR LEVI S L A VT + +F W ++ S F LG P+LVHAQSILA Sbjct: 48 IWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSADPETFAKNRELEVIH--SRWAMLGALGCVTPELLAKNGVKFGEAVW-----------------------------FKAGSQIFAEGGLDYLGNPSLVHAQSILA 159
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 9.663e-19 Identity = 61/137 (44.53%), Postives = 72/137 (52.55%), Query Frame = 1 Query: 358 RVKYLGPFSAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVIFFPSYSCPLSAGNVVTATKILILLFQFVGDPWQVGYAWSTRLHHP*SSREMA*SRLQGTGLVQSWSSDFLRRVA*LLGKPNLVHAQSILA 768 RVKYLGPFS + PSYLTGEFPGDYGWDTAGLSA PE FA+NR LEVI C +SA ++L ++ Q G+ W G + D+ LG P+LVHAQSILA Sbjct: 58 RVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVI---HSRCAMSAALGCIFPELLSVMGQGFGEA-----VWFK----------------AGAQIFSEGGLDY-------LGNPSLVHAQSILA 163 HSP 2 Score: 81.6481 bits (200), Expect = 6.482e-15 Identity = 54/103 (52.43%), Postives = 61/103 (59.22%), Query Frame = 2 Query: 584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLGNPTLFMLKAFWLSWDPG-XPHGAR*GFRINGLPVSEKEQPL-PGCXYFDPLGL 886 VIH R AM ALGCI PE+L + F E VWFKAGAQIFSEG LDYLGNP+L ++ W GA G+RI P+ E PL PG FD LGL Sbjct: 103 VIHSRCAMSAALGCIFPELLSV-MGQGFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYRIARGPLGEVTDPLYPGS--FDSLGL 202
BLAST of EY720100 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 52.373 bits (124), Expect = 9.748e-16 Identity = 26/55 (47.27%), Postives = 33/55 (60.00%), Query Frame = 1 Query: 343 WYGPDRVKYLGPF---SAQTPSYLTGEFPGDYGWDTAGLSADPEAFARNRALEVI 498 WYGPDR +L ++ P YL GE GDYG+D GL PE FA+ +A E+I Sbjct: 62 WYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELI 116 HSP 2 Score: 52.373 bits (124), Expect = 9.748e-16 Identity = 42/107 (39.25%), Postives = 50/107 (46.73%), Query Frame = 2 Query: 584 VIHGRWAMLGALGCITPEVLEKWLKVDFKEPVWFKAGAQIFSEGWLDYLG-----NPTLFMLKAFWLSWDPGXPHGAR*GFRI-NGLPVSEKEQPLPGCXYFDPLGL 886 +IH RWAMLGA G I PE L K+ E VWFK GA + L+Y G N L ++ L G +RI NGL +K P FDPLGL Sbjct: 115 LIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVVAEVVLL-------GGAEYYRITNGLDFEDKLHP---GGPFDPLGL 211 The following BLAST results are available for this feature:
BLAST of EY720100 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >EY720100 ID=EY720100; Name=EY720100; organism=Citrus sinensis; type=EST; length=895bpback to top |