EY692791

Overview
NameEY692791
Unique NameEY692791
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length930
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY692791 vs. ExPASy Swiss-Prot
Match: PSB4_DROME (Proteasome subunit beta type-4 OS=Drosophila melanogaster GN=Prosbeta7 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.144e-24
Identity = 53/120 (44.17%), Postives = 82/120 (68.33%), Query Frame = 3 
Query:  168 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELSRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNMRHKLDPLWNSLVLGGVQN-GHEYLGVV 524
            TGTSV+ ++Y  G+++AAD   SYGS  RY+++ER+  + K+ LLG SG+ +D Q + RN+D+ ++ D   DD   + PK L S++TRV+YN R +++PL+  +V+GGV N G  YL  V
Sbjct:   56 TGTSVLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKVNKNILLGGSGDFADIQSIKRNIDQKMIEDQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVDNEGTPYLANV 175
[Close]
BLAST of EY692791 vs. ExPASy Swiss-Prot
Match: PSB4_ENCCU (Probable proteasome subunit beta type-4 OS=Encephalitozoon cuniculi GN=PRE4 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 6.579e-18
Identity = 48/111 (43.24%), Postives = 68/111 (61.26%), Query Frame = 3 
Query:  162 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELSRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNMRHKLDPLWNSLVLGGV 494
            +VTGT+VV+ +Y+DGI+M AD  GSYG   +   V+RI  +G  +LLG SGEISD Q L + L  L   DN       + PK  H  + R++Y+ R K+ PL  S+ +GG+
Sbjct:   13 FVTGTTVVSFRYRDGIIMGADTRGSYGRLAKLSGVQRIFKVGDQTLLGMSGEISDMQYLVKTLTILTQEDN-----RRIDPKGYHKMIQRILYSARSKISPLNLSVCVGGL 118
The following BLAST results are available for this feature:
BLAST of EY692791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
PSB4_DROME6.144e-2444.17Proteasome subunit beta type-4 OS=Drosophila melan... [more]
PSB4_ENCCU6.579e-1843.24Probable proteasome subunit beta type-4 OS=Encepha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-004-E02-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692791 ID=EY692791; Name=EY692791; organism=Citrus sinensis; type=EST; length=930bp
CCCACGCGTCCGCTCAGAAGTTAGATCGTGAAGCCTGAGCTGATCAGCTT
TGCTATTTACTGAGAAAGTGAATCAAATCTCAAAACGAATTAATGGAATC
GATCCAAGCCAAACAAGGACTTGTCGGCCCTAACGACCCCATTCAAAGAA
CCCAGTTACCATATGTGACTGGTACATCTGTTGTTGCGCTGAAGTACAAA
GATGGCATATTAATGGCTGCTGACATGGGAGGTTCCTATGGGTCAACAAT
CCGATACAAGAGTGTGGAACGGATTAAACCTATTGGAAAGCATTCTCTAC
TGGGTGCCAGTGGAGAAATAAGTGATTTTCAGGAGCTTTCGCGTAATCTT
GATGAGCTCATACTTTATGACAATATGTGGGATGATGGGAACTCTTTGGG
GCCAAAAGAGTTGCACAGCTATTTGACCAGGGTCATGTATAACATGCGTC
ACAAGTTAGATCCATTGTGGAACTCTCTTGTGCTTGGTGGAGTGCAAAAT
GGACACGAATATCTTGGCGTGGTATCATGATAGGAGTGAACTTTGAGGAC
AGCCATGTTGCAACTGGTTTTGGGATCACTTTGCAAGGCAATTTTCCTGA
TGAATGCATGAAAACTTGATTATGAATATTGCCTAAATCGCTGAAAAGTG
CATGCAGAGCACCTGATCTTGAAGATCTGCCGTCAACAGCTGCTATACAA
AGATCACTGGGAAGGGCACAATTTCCAATCCTCGCATGAATACTTTTGGG
ATTACTGAATTCAAATCAAAAGGGTGCTTAGGACATGGAATGGACATGAA
AACTTCTAAAGTTTTTTCTGGGGACTTGGAGAGAACTTGTTCTGCTTTTC
CCTGATATTGGGAATAAGAACAAAGGTTATAAATCTCGGCTTATTTGTTT
AACTTTACTTAAGGCCACTGAACAAGTAAA
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