EY692791
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY692791 vs. ExPASy Swiss-Prot
Match: PSB4_ARATH (Proteasome subunit beta type-4 OS=Arabidopsis thaliana GN=PBG1 PE=1 SV=2) HSP 1 Score: 218.009 bits (554), Expect = 1.516e-59 Identity = 101/128 (78.91%), Postives = 117/128 (91.41%), Query Frame = 3 Query: 144 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELSRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNMRHKLDPLWNSLVLGGVQNGHEYLGVVS 527 QRT PYVTGTS+VA+KYKDG+LMA+DMGGSYGST+RYK++ER+K IGKHSLLGASGEISDFQE+ R LDEL L DNMWDDGNSLGPKE+H+YLTRVMYN R+K +PLWN+LVLGGV+NG YLG+VS Sbjct: 22 QRTLYPYVTGTSIVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLLGASGEISDFQEILRYLDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNTLVLGGVKNGKSYLGMVS 149 HSP 2 Score: 33.8834 bits (76), Expect = 1.516e-59 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 2 Query: 527 MIGVNFEDSHVATGFG 574 MIGV+FED HVATGFG Sbjct: 150 MIGVSFEDDHVATGFG 165
BLAST of EY692791 vs. ExPASy Swiss-Prot
Match: PSB4_BOVIN (Proteasome subunit beta type-4 OS=Bos taurus GN=PSMB4 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.105e-32 Identity = 62/129 (48.06%), Postives = 95/129 (73.64%), Query Frame = 3 Query: 138 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELSRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNMRHKLDPLWNSLVLGGVQNGHEYLGVV 524 PI RTQ P VTGTSV+ LK++ G+++AADM GSYGS R++++ RI + ++LGASG+ +DFQ L + L ++++ + + DG+S PK +HS+LTR MY+ R K++PLWN++V+GG +G +LG V Sbjct: 42 PITRTQNPMVTGTSVLGLKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDEELLGDGHSYSPKAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYV 170 HSP 2 Score: 21.9422 bits (45), Expect = 2.105e-32 Identity = 9/19 (47.37%), Postives = 13/19 (68.42%), Query Frame = 2 Query: 527 MIGVNFEDSHVATGFGITL 583 M+GV +E +ATG+G L Sbjct: 172 MLGVAYEAPSLATGYGAYL 190
BLAST of EY692791 vs. ExPASy Swiss-Prot
Match: PSB4_XENLA (Proteasome subunit beta type-4 (Fragment) OS=Xenopus laevis GN=psmb4 PE=2 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 2.746e-32 Identity = 59/129 (45.74%), Postives = 97/129 (75.19%), Query Frame = 3 Query: 138 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELSRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNMRHKLDPLWNSLVLGGVQNGHEYLGVV 524 P++ T P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + ++++LGASG+ +D+Q L + +D++++ + + DG++ PK +HS+LTRVMYN R K++PLWN++V+GG NG +LG V Sbjct: 20 PVRHTLNPMVTGTSVLGVKFDGGVIIAADMLGSYGSLARFRNISRIMKVNENTILGASGDYADYQYLKQVIDQMVIDEELVGDGHNYSPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFYNGESFLGYV 148 HSP 2 Score: 21.557 bits (44), Expect = 2.746e-32 Identity = 9/18 (50.00%), Postives = 12/18 (66.67%), Query Frame = 2 Query: 530 IGVNFEDSHVATGFGITL 583 +GV +E +ATGFG L Sbjct: 151 LGVAYEAPTIATGFGAYL 168
BLAST of EY692791 vs. ExPASy Swiss-Prot
Match: PSB4_HUMAN (Proteasome subunit beta type-4 OS=Homo sapiens GN=PSMB4 PE=1 SV=4) HSP 1 Score: 136.732 bits (343), Expect = 1.027e-31 Identity = 60/129 (46.51%), Postives = 95/129 (73.64%), Query Frame = 3 Query: 138 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELSRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNMRHKLDPLWNSLVLGGVQNGHEYLGVV 524 PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+ +DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+ R K++PLWN++V+GG +G +LG V Sbjct: 42 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYV 170 HSP 2 Score: 21.9422 bits (45), Expect = 1.027e-31 Identity = 9/19 (47.37%), Postives = 13/19 (68.42%), Query Frame = 2 Query: 527 MIGVNFEDSHVATGFGITL 583 M+GV +E +ATG+G L Sbjct: 172 MLGVAYEAPSLATGYGAYL 190
BLAST of EY692791 vs. ExPASy Swiss-Prot
Match: PSB4_MOUSE (Proteasome subunit beta type-4 OS=Mus musculus GN=Psmb4 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.267e-31 Identity = 60/129 (46.51%), Postives = 94/129 (72.87%), Query Frame = 3 Query: 138 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELSRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNMRHKLDPLWNSLVLGGVQNGHEYLGVV 524 PI RTQ P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + ++LGASG+ +DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+ R K++PLWN++V+GG +G +LG V Sbjct: 42 PITRTQNPMVTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGESFLGYV 170 HSP 2 Score: 21.9422 bits (45), Expect = 2.267e-31 Identity = 9/19 (47.37%), Postives = 13/19 (68.42%), Query Frame = 2 Query: 527 MIGVNFEDSHVATGFGITL 583 M+GV +E +ATG+G L Sbjct: 172 MLGVAYEAPSLATGYGAYL 190
BLAST of EY692791 vs. ExPASy Swiss-Prot
Match: PSB4_RAT (Proteasome subunit beta type-4 OS=Rattus norvegicus GN=Psmb4 PE=1 SV=2) HSP 1 Score: 135.191 bits (339), Expect = 2.953e-31 Identity = 61/132 (46.21%), Postives = 94/132 (71.21%), Query Frame = 3 Query: 129 PNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELSRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNMRHKLDPLWNSLVLGGVQNGHEYLGVV 524 P PI RTQ P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + ++LGASG+ +DFQ L + L ++++ + ++ DG+S P+ +HS+LTR MY+ R K++PLWN+ V+GG G +LG V Sbjct: 38 PARPITRTQNPMVTGTSVLGVKFDCGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYADFQYLKQVLGQMVIDEELFGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTKVIGGYAGGESFLGYV 169 HSP 2 Score: 21.9422 bits (45), Expect = 2.953e-31 Identity = 9/19 (47.37%), Postives = 13/19 (68.42%), Query Frame = 2 Query: 527 MIGVNFEDSHVATGFGITL 583 M+GV +E +ATG+G L Sbjct: 171 MLGVAYEAPSLATGYGAYL 189
BLAST of EY692791 vs. ExPASy Swiss-Prot
Match: PSB4_DICDI (Proteasome subunit beta type-4 OS=Dictyostelium discoideum GN=psmB4-1 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 4.393e-30 Identity = 62/127 (48.82%), Postives = 91/127 (71.65%), Query Frame = 3 Query: 144 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELSRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNMRHKLDPLWNSLVLGGVQNGHEYLGVV 524 Q+T P VTGTSV+A+KY G++M +DM SYGS R+ S ER+K G ++++GASGE SDFQ ++ L++L+ D+ DDG+ L +E+ +YL RV+YN R++ +PLWN+LV+ G Q G +LG V Sbjct: 35 QKTLDPIVTGTSVIAIKYDKGVVMGSDMLLSYGSLARFNSTERMKKFGGYTIVGASGEYSDFQSITNTLNDLVTDDHCMDDGSKLSSEEIWNYLARVLYNQRNRGNPLWNTLVVMGYQGGKSFLGKV 161
BLAST of EY692791 vs. ExPASy Swiss-Prot
Match: PSB4_SCHPO (Probable proteasome subunit beta type-4 OS=Schizosaccharomyces pombe GN=SPBC577.10 PE=2 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 3.148e-28 Identity = 57/119 (47.90%), Postives = 87/119 (73.11%), Query Frame = 3 Query: 138 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELSRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNMRHKLDPLWNSLVLGGV 494 PIQRT P VTG+SV+ALK+ DG+++AAD SYGS R+ VER+ +G ++++GA G+ISD+Q++ R L++L + + + DG +L P +H YL++V+Y R+KLDP WN L++ GV Sbjct: 32 PIQRTVQPIVTGSSVLALKFADGVMIAADNLASYGSLARFYDVERLTKVGDNTIVGAGGDISDYQQIQRLLEKLEIKEGNYGDGYALQPSYIHEYLSKVLYARRNKLDPYWNQLIVAGV 150
BLAST of EY692791 vs. ExPASy Swiss-Prot
Match: PSB4_YEAST (Proteasome component PRE4 OS=Saccharomyces cerevisiae GN=PRE4 PE=1 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 4.546e-27 Identity = 61/135 (45.19%), Postives = 93/135 (68.89%), Query Frame = 3 Query: 138 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELSRNLDELI---LYDN-MWDDGNSLGPKELHSYLTRVMYNMRHKLDPLWNSLVLGGVQ-NGHEYLGVVS 527 P+ TQ P VTGTSV+++KY +G+++AAD GSYGS +R+ VER+ P+G ++++G SG+ISD Q + R L +L+ YDN + D +L P + YL VMY R K++PLWN++++ GVQ NG ++L V+ Sbjct: 30 PMVNTQQPIVTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGDISDMQHIERLLKDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAIIVAGVQSNGDQFLRYVN 164
BLAST of EY692791 vs. ExPASy Swiss-Prot
Match: PSB4_PIG (Proteasome subunit beta type-4 (Fragment) OS=Sus scrofa GN=PSMB4 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 5.937e-27 Identity = 54/113 (47.79%), Postives = 83/113 (73.45%), Query Frame = 3 Query: 138 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELSRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNMRHKLDPLWNS 476 PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+ +DFQ L + L ++++ + + DG+S PK +HS+LTR MYN R K++PLW + Sbjct: 42 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVLGQMVIDEELLGDGHSYSPKAIHSWLTRAMYNRRFKMNPLWTT 154 The following BLAST results are available for this feature:
BLAST of EY692791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >EY692791 ID=EY692791; Name=EY692791; organism=Citrus sinensis; type=EST; length=930bpback to top |