EY692487

Overview
NameEY692487
Unique NameEY692487
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Libraries
Library NameType
Sweet orange fruit, development stadium (1 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY692487 vs. ExPASy Swiss-Prot
Match: FTSH1_SYNY3 (Cell division protease ftsH homolog 1 OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.001e-12
Identity = 42/110 (38.18%), Postives = 63/110 (57.27%), Query Frame = 3 
Query:  264 GNVGVGTALLGSGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGN 593
            G+ G   A LGS  A        ++RM+Y RFLEY+D  R+  VDL+ENG  AIV+   PE+ +R  R RV LP  + EL+ + R+ NI   +H  +  +  +++  +GN
Sbjct:   25 GSFGGADANLGSNTA--------NTRMTYGRFLEYVDAGRITSVDLYENGRTAIVQVSDPEV-DRTLRSRVDLPTNAPELIARLRDSNIRLDSHPVR--NNGMVWGFVGN 123
The following BLAST results are available for this feature:
BLAST of EY692487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
FTSH1_SYNY39.001e-1238.18Cell division protease ftsH homolog 1 OS=Synechocy... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-700-001-B10-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692487 ID=EY692487; Name=EY692487; organism=Citrus sinensis; type=EST; length=912bp
CCACGCGTCCGCGGACGCGTGGGTCAAATTCTGTTCCAACAATTCTTTCT
TTCAAGATGGCAGCTTCATCAGCTTGCCTTGTAGGGAATATTTTGACAAC
ACACAAGACTAAAACAAATTTGAGCAAGGACTTCCATGGTAGGCATCTTC
TGTTTAACTCGAGTTTTCGATCATTGGAAAAGAAGCCAAAAGTAGCCGTT
GTAAAGGCATCTTTGAGCCAGAAGCAGCATGAAGGAAGAAGAGGGTTTCT
TAAGAAGCTGCTTGGAAATGTTGGAGTTGGTACTGCTTTGTTGGGGAGTG
GGAAAGCCTATGCCGATGAACAGGGGGTTTCTTCCTCTAGGATGTCTTAC
TCTAGGTTCTTGGAGTATCTTGATAAGGACAGGGTGAAGAAGGTTGATTT
GTTTGAGAATGGTACCATAGCTATTGTGGAGGCTATTTCCCCTGAGTTGG
GTAACCGGGTGCAACGAGTTCGCGTTCAACTTCCAGGTCTAAGTCAGGAG
CTTCTCCAGAAATTCAGGGAGAAGAACATTGATTTTGCTGCCCATAATGC
TCAAGAGGACTCAGGATCATTGTTGTTTAACTTGATTGGGAATCTGGCTT
TCCCACTTATCTTAATTGGAGGGCTGTTCCTTCTCTCAAGGCGTTCATCT
GGTGGAATGGGCGGTCCTGGTGGGCCTGGTTTCCCCCTTGCCTTTGGTCA
GTCAAAGCTAAATTCCAGATGGAACCAATACTGGTGTGACATTTGATGAN
TGTGCCCGGAGTGATGAGGCAAAACAGATTTCATGGAAGTGGTGGAGTCC
CTTAGAAGCCCGAGAGATTACAGCTATTGGAGCTCGTATTCCCAAGGTGT
TNNCTCTCGTGGTCCCTCAGAAAACTGGGAGACTCTCTTGCCAGGCAATT
GCTGGTGAAGCC
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