EY690137
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: RL40_NICSY (60S ribosomal protein L40 OS=Nicotiana sylvestris GN=UBICEP52-7 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 4.478e-24 Identity = 50/52 (96.15%), Postives = 52/52 (100.00%), Query Frame = 2 Query: 149 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHNNQLRPKKKIK 304 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCR+KKCGH+NQLRPKKKIK Sbjct: 1 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRRKKCGHSNQLRPKKKIK 52
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: RL40_ORYSJ (60S ribosomal protein L40 OS=Oryza sativa subsp. japonica GN=Ub-CEP52-1 PE=3 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 7.639e-24 Identity = 50/52 (96.15%), Postives = 51/52 (98.08%), Query Frame = 2 Query: 149 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHNNQLRPKKKIK 304 IIEPSL ALARKYNQDKMICRKCYARLHPRAVNCRKKKCGH+NQLRPKKKIK Sbjct: 1 IIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 52
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: RL40_ARATH (60S ribosomal protein L40 OS=Arabidopsis thaliana GN=UBQ1 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 7.639e-24 Identity = 50/52 (96.15%), Postives = 51/52 (98.08%), Query Frame = 2 Query: 149 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHNNQLRPKKKIK 304 IIEPSLM LARKYNQDKMICRKCYARLHPRAVNCRKKKCGH+NQLRPKKKIK Sbjct: 1 IIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 52
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: RL40_BRARA (60S ribosomal protein L40 OS=Brassica rapa PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 1.702e-23 Identity = 50/52 (96.15%), Postives = 51/52 (98.08%), Query Frame = 2 Query: 149 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHNNQLRPKKKIK 304 IIEPSLMALARKYNQ KMICRKCYARLHPRAVNCRKKKCGH+NQLRPKKKIK Sbjct: 1 IIEPSLMALARKYNQAKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 52
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: RL40_CHLRE (60S ribosomal protein L40 OS=Chlamydomonas reinhardtii GN=UBI1 PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 9.338e-22 Identity = 46/52 (88.46%), Postives = 48/52 (92.31%), Query Frame = 2 Query: 149 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHNNQLRPKKKIK 304 IIEPSL ALARKYNQ+KMICRKCYARLHPRA NCRKK CGH NQLRPKKK+K Sbjct: 1 IIEPSLQALARKYNQEKMICRKCYARLHPRAKNCRKKSCGHTNQLRPKKKLK 52
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: RL40_SHEEP (60S ribosomal protein L40 OS=Ovis aries GN=UBA52 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.052e-21 Identity = 45/52 (86.54%), Postives = 47/52 (90.38%), Query Frame = 2 Query: 149 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHNNQLRPKKKIK 304 IIEPSL LA+KYN DKMICRKCYARLHPRAVNCRKKKCGH N LRPKKK+K Sbjct: 1 IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: RL40_RAT (60S ribosomal protein L40 OS=Rattus norvegicus GN=Uba52 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.052e-21 Identity = 45/52 (86.54%), Postives = 47/52 (90.38%), Query Frame = 2 Query: 149 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHNNQLRPKKKIK 304 IIEPSL LA+KYN DKMICRKCYARLHPRAVNCRKKKCGH N LRPKKK+K Sbjct: 1 IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: RL40_PONAB (60S ribosomal protein L40 OS=Pongo abelii GN=UBA52 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.052e-21 Identity = 45/52 (86.54%), Postives = 47/52 (90.38%), Query Frame = 2 Query: 149 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHNNQLRPKKKIK 304 IIEPSL LA+KYN DKMICRKCYARLHPRAVNCRKKKCGH N LRPKKK+K Sbjct: 1 IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: RL40_PIG (60S ribosomal protein L40 OS=Sus scrofa GN=UBA52 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.052e-21 Identity = 45/52 (86.54%), Postives = 47/52 (90.38%), Query Frame = 2 Query: 149 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHNNQLRPKKKIK 304 IIEPSL LA+KYN DKMICRKCYARLHPRAVNCRKKKCGH N LRPKKK+K Sbjct: 1 IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
BLAST of EY690137 vs. ExPASy Swiss-Prot
Match: RL40_OPHHA (60S ribosomal protein L40 OS=Ophiophagus hannah PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.052e-21 Identity = 45/52 (86.54%), Postives = 47/52 (90.38%), Query Frame = 2 Query: 149 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHNNQLRPKKKIK 304 IIEPSL LA+KYN DKMICRKCYARLHPRAVNCRKKKCGH N LRPKKK+K Sbjct: 1 IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52 The following BLAST results are available for this feature:
BLAST of EY690137 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 107
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Sequences
The
following sequences are available for this feature:
EST sequence >EY690137 ID=EY690137; Name=EY690137; organism=Citrus sinensis; type=EST; length=574bpback to top |