EY679888

Overview
NameEY679888
Unique NameEY679888
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length977
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY679888 vs. ExPASy Swiss-Prot
Match: FENR_MESCR (Ferredoxin--NADP reductase, chloroplastic OS=Mesembryanthemum crystallinum GN=PETH PE=2 SV=1)

HSP 1 Score: 362.844 bits (930), Expect = 1.658e-99
Identity = 170/188 (90.43%), Postives = 180/188 (95.74%), Query Frame = 1
Query:    1 NENGEIAKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKYEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKSEQW 564
            N+NGEI KGVCSNFLCDLKPG+EV +TGPVGKEMLMP+DPNAT+IMLATGTGIAPFR FLWKMFFEK++DYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQ NEKGEKMYIQTRMA+Y  ELWELLKKDNTYVYMCGL+GMEKGIDDIMVSLAA DGIDW DYKKQLKK+EQW
Sbjct:  173 NDNGEIVKGVCSNFLCDLKPGSEVVLTGPVGKEMLMPKDPNATIIMLATGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQTNEKGEKMYIQTRMAQYDRELWELLKKDNTYVYMCGLKGMEKGIDDIMVSLAAEDGIDWFDYKKQLKKAEQW 360          
BLAST of EY679888 vs. ExPASy Swiss-Prot
Match: FNRL1_ARATH (Ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic OS=Arabidopsis thaliana GN=LFNR1 PE=1 SV=1)

HSP 1 Score: 357.836 bits (917), Expect = 5.332e-98
Identity = 168/188 (89.36%), Postives = 178/188 (94.68%), Query Frame = 1
Query:    1 NENGEIAKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKYEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKSEQW 564
            N+ GEI KGVCSNFLCDLKPG E KITGPVGKEMLMP+DPNAT+IML TGTGIAPFR FLWKMFFE++EDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEK P+NFRLDFAVSREQ NEKGEKMYIQTRMAEYA ELWELLKKDNT+VYMCGL+GMEKGIDDIMVSLAA DGIDWL+YKKQLK+SEQW
Sbjct:  168 NDGGEIVKGVCSNFLCDLKPGDEAKITGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEEHEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKNPDNFRLDFAVSREQTNEKGEKMYIQTRMAEYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDGIDWLEYKKQLKRSEQW 355          
BLAST of EY679888 vs. ExPASy Swiss-Prot
Match: FENR1_PEA (Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Pisum sativum GN=PETH PE=1 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 1.552e-97
Identity = 166/188 (88.30%), Postives = 180/188 (95.74%), Query Frame = 1
Query:    1 NENGEIAKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKYEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKSEQW 564
            N+ GE+ KGVCSNFLCDLKPG+EVKITGPVGKEMLMP+DPNATVIML TGTGIAPFR FLWKMFFEK+EDY+FNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQ N+KGEKMYIQTRMA+YA ELWELLKKDNT+VYMCGL+GMEKGIDDIMVSLAA DGIDW++YK+ LKK+EQW
Sbjct:  168 NDAGEVVKGVCSNFLCDLKPGSEVKITGPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYQFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVSLAAKDGIDWIEYKRTLKKAEQW 355          
BLAST of EY679888 vs. ExPASy Swiss-Prot
Match: FENR_VICFA (Ferredoxin--NADP reductase, chloroplastic OS=Vicia faba GN=PETH PE=2 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 1.313e-96
Identity = 164/188 (87.23%), Postives = 178/188 (94.68%), Query Frame = 1
Query:    1 NENGEIAKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKYEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKSEQW 564
            N+ GE+ KGVCSNFLCDLKPG+EVKITGPVGKEMLMP+DPNATVIML TGTGIAPFR FLWKMFFEK+EDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQ N+KGEKMYIQTRMA+YA ELWELLKKDNT+VYMCGL+GMEKGIDDIMVS+   DGIDW++YK+ LKK+EQW
Sbjct:  171 NDAGEVVKGVCSNFLCDLKPGSEVKITGPVGKEMLMPKDPNATVIMLGTGTGIAPFRSFLWKMFFEKHEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQVNDKGEKMYIQTRMAQYAEELWELLKKDNTFVYMCGLKGMEKGIDDIMVSIRPKDGIDWIEYKRTLKKAEQW 358          
BLAST of EY679888 vs. ExPASy Swiss-Prot
Match: FENR_SPIOL (Ferredoxin--NADP reductase, chloroplastic OS=Spinacia oleracea GN=PETH PE=1 SV=1)

HSP 1 Score: 352.829 bits (904), Expect = 1.715e-96
Identity = 164/188 (87.23%), Postives = 179/188 (95.21%), Query Frame = 1
Query:    1 NENGEIAKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKYEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKSEQW 564
            N+ GE  KGVCSNFLCDLKPGAEVK+TGPVGKEMLMP+DPNAT+IML TGTGIAPFR FLWKMFFEK++DYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAP+NFRLDFAVSREQ NEKGEKMYIQTRMA+YA ELWE+LKKDNTY YMCGL+GMEKGIDDIMVSLAA +GIDW++YK+QLKK+EQW
Sbjct:  177 NDAGETIKGVCSNFLCDLKPGAEVKLTGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKKDNTYFYMCGLKGMEKGIDDIMVSLAAAEGIDWIEYKRQLKKAEQW 364          
BLAST of EY679888 vs. ExPASy Swiss-Prot
Match: FENR1_ORYSJ (Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0107700 PE=2 SV=1)

HSP 1 Score: 352.058 bits (902), Expect = 2.926e-96
Identity = 164/188 (87.23%), Postives = 176/188 (93.62%), Query Frame = 1
Query:    1 NENGEIAKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKYEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKSEQW 564
            N+ GEI KGVCSNFLCDLKPG++VKITGPVGKEMLMP+DPNA +IMLATGTGIAPFR FLWKMFFEKY+DYKFNGLAWLFLGVPTSSSLLYKEEF+KMK KAPENFR+D+AVSREQ N +GEKMYIQTRMAEY  ELWELLKKD+TYVYMCGL+GMEKGIDDIMVSLAA DGIDW DYKKQLKK EQW
Sbjct:  170 NDQGEIVKGVCSNFLCDLKPGSDVKITGPVGKEMLMPKDPNANIIMLATGTGIAPFRSFLWKMFFEKYDDYKFNGLAWLFLGVPTSSSLLYKEEFDKMKAKAPENFRVDYAVSREQTNAQGEKMYIQTRMAEYKEELWELLKKDHTYVYMCGLKGMEKGIDDIMVSLAAKDGIDWADYKKQLKKGEQW 357          
BLAST of EY679888 vs. ExPASy Swiss-Prot
Match: FNRL2_ARATH (Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic OS=Arabidopsis thaliana GN=LFNR2 PE=1 SV=1)

HSP 1 Score: 350.517 bits (898), Expect = 8.513e-96
Identity = 161/188 (85.64%), Postives = 179/188 (95.21%), Query Frame = 1
Query:    1 NENGEIAKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKYEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKSEQW 564
            N+ GE  KGVCSNFLCDL PG++VK+TGPVGKEMLMP+DPNATVIMLATGTGIAPFR FLWKMFFEK++DYKFNGLAWLFLGVPT+SSLLY+EEF+KMK KAPENFR+D+A+SREQ N+KGEKMYIQTRMA+YA ELWELLKKDNT+VYMCGL+GMEKGIDDIMVSLAANDGIDW DYKKQLKK+EQW
Sbjct:  177 NDQGETVKGVCSNFLCDLAPGSDVKLTGPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTTSSLLYQEEFDKMKAKAPENFRVDYAISREQANDKGEKMYIQTRMAQYAAELWELLKKDNTFVYMCGLKGMEKGIDDIMVSLAANDGIDWFDYKKQLKKAEQW 364          
BLAST of EY679888 vs. ExPASy Swiss-Prot
Match: FENR1_TOBAC (Ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic OS=Nicotiana tabacum GN=PETH PE=2 SV=1)

HSP 1 Score: 346.28 bits (887), Expect = 1.606e-94
Identity = 163/188 (86.70%), Postives = 175/188 (93.09%), Query Frame = 1
Query:    1 NENGEIAKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKYEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKSEQW 564
            N+ GE  KGVCSNFLCDLKPGAEVKITGPVGKEMLMP+DPNATVIMLATGTGIAPFR FLWKMFFEK+EDYKFNG AWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQ NEKGEKMYIQTRMA+YA ELW LL+KDNT++YMCGL+GME+GID+IM +LA  DGI W DYKKQLKK+EQW
Sbjct:  170 NDKGEEVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFFEKHEDYKFNGTAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQTNEKGEKMYIQTRMAQYAEELWTLLQKDNTFIYMCGLKGMEQGIDEIMSALAERDGIVWADYKKQLKKAEQW 357          
BLAST of EY679888 vs. ExPASy Swiss-Prot
Match: FENR_CYAPA (Ferredoxin--NADP reductase, cyanelle OS=Cyanophora paradoxa GN=PETH PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.758e-70
Identity = 125/186 (67.20%), Postives = 147/186 (79.03%), Query Frame = 1
Query:    7 NGEIAKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKYEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKSEQW 564
            NG + KGVCSN+LCDLKPG EV ITGPVG  MLMP D +AT+IMLATGTGIAPFR FL +MF E + DYKFNGLAWLFLGVPTSS+LLY+EE EKM++  P NFRLD+A+SREQ + KGEKMYIQ R+AEYANE W +++K NT+VYMCGLRGME GI   M  +A  +G  W    K LKK ++W
Sbjct:  173 NGNLVKGVCSNYLCDLKPGDEVMITGPVGTTMLMPEDQSATIIMLATGTGIAPFRSFLRRMFEETHADYKFNGLAWLFLGVPTSSTLLYREELEKMQKANPNNFRLDYAISREQTDSKGEKMYIQNRIAEYANEFWNMIQKPNTFVYMCGLRGMEDGIQQCMEDIAKANGTTWDAVVKGLKKEKRW 358          
BLAST of EY679888 vs. ExPASy Swiss-Prot
Match: FENR_SPISP (Ferredoxin--NADP reductase OS=Spirulina sp. GN=petH PE=1 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 4.121e-66
Identity = 112/187 (59.89%), Postives = 150/187 (80.21%), Query Frame = 1
Query:    4 ENGEIAKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGFLWKMFFEKYEDYKFNGLAWLFLGVPTSSSLLYKEEFEKMKEKAPENFRLDFAVSREQKNEKGEKMYIQTRMAEYANELWELLKKDNTYVYMCGLRGMEKGIDDIMVSLAANDGIDWLDYKKQLKKSEQW 564
            E GE   GVCS +LC+L+ GA+V ITGPVGKEML+P D +AT+IM+ATGTGIAPFR FLW++F E++EDYKF GLAWLF G+P S ++LY++E E+++E+ PENFRL  A+SREQ+N +G KMYIQ R+ E A++LWEL++K NT+ Y+CGL+GME GID+ M + A    +DW DY+K+LKK  +W
Sbjct:  103 ETGETVYGVCSTYLCNLEAGADVAITGPVGKEMLLPEDEDATIIMMATGTGIAPFRAFLWRIFKEQHEDYKFKGLAWLFFGIPYSPNILYQQELEELQEEFPENFRLTLAISREQQNPEGGKMYIQDRIKENADQLWELIQKPNTHTYICGLKGMEGGIDEGMSAAAGKFDVDWSDYQKELKKKHRW 289          
The following BLAST results are available for this feature:
BLAST of EY679888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
FENR_MESCR1.658e-9990.43Ferredoxin--NADP reductase, chloroplastic OS=Mesem... [more]
FNRL1_ARATH5.332e-9889.36Ferredoxin--NADP reductase, leaf isozyme 1, chloro... [more]
FENR1_PEA1.552e-9788.30Ferredoxin--NADP reductase, leaf isozyme, chloropl... [more]
FENR_VICFA1.313e-9687.23Ferredoxin--NADP reductase, chloroplastic OS=Vicia... [more]
FENR_SPIOL1.715e-9687.23Ferredoxin--NADP reductase, chloroplastic OS=Spina... [more]
FENR1_ORYSJ2.926e-9687.23Ferredoxin--NADP reductase, leaf isozyme, chloropl... [more]
FNRL2_ARATH8.513e-9685.64Ferredoxin--NADP reductase, leaf isozyme 2, chloro... [more]
FENR1_TOBAC1.606e-9486.70Ferredoxin--NADP reductase, leaf-type isozyme, chl... [more]
FENR_CYAPA2.758e-7067.20Ferredoxin--NADP reductase, cyanelle OS=Cyanophora... [more]
FENR_SPISP4.121e-6659.89Ferredoxin--NADP reductase OS=Spirulina sp. GN=pet... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-650-005-B04-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679888 ID=EY679888; Name=EY679888; organism=Citrus sinensis; type=EST; length=977bp
AACGAAAATGGAGAAATTGCTAAGGGAGTCTGCTCAAATTTCTTGTGTGA
CTTGAAGCCTGGGGCTGAAGTGAAAATTACAGGACCTGTTGGGAAAGAAA
TGCTCATGCCAAGGGATCCCAATGCTACAGTCATCATGCTTGCGACTGGA
ACTGGAATCGCTCCATTCCGTGGATTTTTGTGGAAAATGTTCTTTGAGAA
GTACGAAGACTACAAGTTCAATGGTTTGGCATGGCTCTTCTTGGGTGTCC
CGACTAGCAGTTCCCTACTCTACAAGGAGGAGTTTGAGAAGATGAAGGAG
AAGGCCCCGGAAAACTTCAGGCTTGACTTTGCAGTGAGCAGAGAACAAAA
GAATGAGAAGGGTGAGAAGATGTACATTCAAACCCGAATGGCTGAATATG
CAAATGAGCTGTGGGAATTACTCAAGAAAGATAACACTTATGTGTACATG
TGTGGGTTGAGAGGCATGGAGAAGGGAATCGATGACATTATGGTGTCATT
GGCTGCTAACGATGGCATTGATTGGCTGGACTACAAAAAGCAATTGAAGA
AATCTGAGCAATGGGAATGTTGAAGTCTAACTAATGCCTTAATTGTAAAA
AAACATCCCCTCACATTTTCATTTTTTTTTTCCTTTTTGTCCCCCATCGA
AATGAAATTTTCCCTCTGCCCTGTGTAAAAAGGGTAAAATATTTTCAAAA
TTTTTCCTTTGTTTTTTTGGCCTTTTTTAAAGGAAACAATTTAACGGCTA
ATTGGTCTCTAACAAATTTTATTTTCTTTGAAGGAATCATTGTACCTTGG
AAAAATAAATTTTGGAAAGGCAAATTCCACCTTTGCTCTAATTTTTAAAC
TTTTCCCGCCCCTGGGACCTGAATCTATTGGCAATTTTTAACCCGGGCTT
TTTTAAAAAAAAATAAAAAAAAAAGAGGTGCTCCACATCAAATTTAAAAA
AAAAAAAAACCCCCCCCCCCTCCTTTT
back to top