EY660345
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY660345 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 6.549e-65 Identity = 100/132 (75.76%), Postives = 108/132 (81.82%), Query Frame = 3 Query: 21 APTMADRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 416 APT DRIGVCKGIFR DNVADDDIVKLVDTFPGQSIDFFGALRARVY DEVR W LVNSKE P+FEQP+MT++KLL YG M+VQEQENVKRVQLADKY+SEAALG+AN DAI+ G FYG Sbjct: 306 APTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYG 437 HSP 2 Score: 67.781 bits (164), Expect = 6.549e-65 Identity = 31/38 (81.58%), Postives = 34/38 (89.47%), Query Frame = 1 Query: 451 GGKAAQQM-NVPVPEGCTDPTAENFDPTARSDDGSCQY 561 GG+AAQQ+ NVPVPEGCTDP A N+DPTARSDDGSC Y Sbjct: 437 GGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVY 474
BLAST of EY660345 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 1.323e-62 Identity = 93/132 (70.45%), Postives = 111/132 (84.09%), Query Frame = 3 Query: 21 APTMADRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 416 APT DR+GVCKGIFR DNV D+DIVK+VD+FPGQSIDFFGALRARVYDDEVR W LVNS+E P FEQP+MT+EKL+EYG M+V+EQENVKRVQLA++YLSEAALG+AN+DA+++G+FYG Sbjct: 297 APTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 428 HSP 2 Score: 66.2402 bits (160), Expect = 1.323e-62 Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 1 Query: 454 GKAAQQM-NVPVPEGCTDPTAENFDPTARSDDGSCQYT 564 G+ AQQ N+PVPEGCTDP A+NFDPTARSDDGSC YT Sbjct: 428 GQGAQQAGNLPVPEGCTDPVAKNFDPTARSDDGSCLYT 465
BLAST of EY660345 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 187.193 bits (474), Expect = 1.105e-61 Identity = 93/132 (70.45%), Postives = 102/132 (77.27%), Query Frame = 3 Query: 21 APTMADRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 416 APT DRIGVCKGIFR D + D+DIV LVD FPGQSIDFFGALRARVYDDEVR + LVNS+E P FEQP MT EKL+EYGNM+V EQENVKRVQLA+ YLS+AALG+ANADAI G FYG Sbjct: 306 APTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYG 437 HSP 2 Score: 71.633 bits (174), Expect = 1.105e-61 Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = 1 Query: 454 GKAAQQMNVPVPEGCTDPTAENFDPTARSDDGSCQY 561 GK AQQ+N+PVPEGCTDP AENFDPTARSDDG+C Y Sbjct: 437 GKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVY 472
BLAST of EY660345 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 3.194e-61 Identity = 91/132 (68.94%), Postives = 110/132 (83.33%), Query Frame = 3 Query: 21 APTMADRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 416 APT DRIGVCKGIF+ DNV+D+ +VK+VDTFPGQSIDFFGALRARVYDDEVR W LVNS++ TFEQP+MT+EKLLEYG+M+VQEQ+NVKRVQLAD Y+S+AALG+AN DA+++G+FYG Sbjct: 296 APTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 427 HSP 2 Score: 65.0846 bits (157), Expect = 3.194e-61 Identity = 28/37 (75.68%), Postives = 31/37 (83.78%), Query Frame = 1 Query: 454 GKAAQQMNVPVPEGCTDPTAENFDPTARSDDGSCQYT 564 GK AQQ +PVPEGCTD A+N+DPTARSDDGSC YT Sbjct: 427 GKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYT 463
BLAST of EY660345 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 181.8 bits (460), Expect = 1.094e-58 Identity = 88/132 (66.67%), Postives = 100/132 (75.76%), Query Frame = 3 Query: 21 APTMADRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 416 APT DRIGVC GIF+ D V + +VKLVD FPGQSIDFFGALRARVY DEVR W LVNSK+ P FEQP MT++KL+EYGNM+VQEQENVKRVQLAD+Y+S AALG+AN DAI G F+G Sbjct: 304 APTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFG 435 HSP 2 Score: 67.0106 bits (162), Expect = 1.094e-58 Identity = 28/38 (73.68%), Postives = 34/38 (89.47%), Query Frame = 1 Query: 454 GKAAQQMNVPVPEGCTDPTAENFDPTARSDDGSCQYTL 567 GKAAQQ+++PV +GCTDP A+N+DPTARSDDGSC Y L Sbjct: 435 GKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTYNL 472
BLAST of EY660345 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.199e-52 Identity = 102/132 (77.27%), Postives = 111/132 (84.09%), Query Frame = 3 Query: 21 APTMADRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 416 APT DRIGVC GIFR+DNVA +DIVKLVDTFPGQSIDFFGALRARVYDDEVR W LVNSKE PTFEQP+MT+EKLLEYGNM+VQEQENVKRVQLADKYLSEAALG+AN+DA+ +G FYG Sbjct: 306 APTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437
BLAST of EY660345 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.500e-50 Identity = 96/132 (72.73%), Postives = 110/132 (83.33%), Query Frame = 3 Query: 21 APTMADRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFYG 416 APT DRIGVCKGIFR DNV D+ +V+LVDTFPGQSIDFFGALRARVYDDEVR W LVNS+E PTF+QP+MT+EKL+EYG+M+VQEQENVKRVQLADKYLSEAALG+AN DA+++G FYG Sbjct: 293 APTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 424
BLAST of EY660345 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 195.667 bits (496), Expect = 2.116e-49 Identity = 94/131 (71.76%), Postives = 108/131 (82.44%), Query Frame = 3 Query: 21 APTMADRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFY 413 APT DR+GVCKGIFR D V ++DI KLVDTFPGQSIDFFGALRARVYDDEVR W LVNSKE PTF+QP+M+++KLL+YGNM+VQEQENVKRVQLADKYL+EAALG AN DAI+SG+F+ Sbjct: 308 APTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438
BLAST of EY660345 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.116e-49 Identity = 95/130 (73.08%), Postives = 107/130 (82.31%), Query Frame = 3 Query: 21 APTMADRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNF 410 APT DRIGVCKGIFR DNV ++DIVK+VD FPGQSIDFFGALRARVYDDEVR W LVNSKE PTFEQP+MT++KLL+YGNM+V+EQENVKRVQLADKY+SEAALG+AN DAI+ G F Sbjct: 306 APTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435
BLAST of EY660345 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 1.050e-48 Identity = 94/131 (71.76%), Postives = 106/131 (80.92%), Query Frame = 3 Query: 21 APTMADRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRNWXXXXXXXXXXXXLVNSKEAAPTFEQPRMTMEKLLEYGNMIVQEQENVKRVQLADKYLSEAALGEANADAIQSGNFY 413 APT DRIGVC GIFR DNV +D+VK+VD FPGQSIDFFGALRARVYDDEVR W L+NS + PTFEQP+MT+EKLLEYGNM+VQEQENVKRVQLADKYL EAALG+ANADAI +G+F+ Sbjct: 310 APTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440 The following BLAST results are available for this feature:
BLAST of EY660345 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >EY660345 ID=EY660345; Name=EY660345; organism=Citrus sinensis; type=EST; length=716bpback to top |