EY659457 | Citrus Genome Database

Overview


Name	EY659457
Unique Name	EY659457
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	952

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: UBIQ_WHEAT (Ubiquitin OS=Triticum aestivum PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.237e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 143.665 bits (361), Expect = 1.512e-33
Identity = 73/75 (97.33%), Postives = 73/75 (97.33%), Query Frame = 3

Query:   27 QISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            QI  KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 140.969 bits (354), Expect = 9.802e-33
Identity = 72/76 (94.74%), Postives = 73/76 (96.05%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            MQIFVKTLTGKTITLEVESSDTIDNVKAKI DKE IPPDQQRLIFAG QL+DGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 75.8702 bits (185), Expect = 3.872e-13
Identity = 39/56 (69.64%), Postives = 43/56 (76.79%), Query Frame = 3

Query:  708 MQIFVKPLTGKTITLKGESFEPIDNVKGKIQDKEGIPPDKRR*SFPANNLEDGGLL 875
            MQIFVK LTGKTITL+ ES + IDNVK KIQDKEGIPPD++R  F    LEDG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: UBIQ_SOYBN (Ubiquitin OS=Glycine max GN=SUBI-1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.237e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 143.665 bits (361), Expect = 1.512e-33
Identity = 73/75 (97.33%), Postives = 73/75 (97.33%), Query Frame = 3

Query:   27 QISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            QI  KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 140.969 bits (354), Expect = 9.802e-33
Identity = 72/76 (94.74%), Postives = 73/76 (96.05%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            MQIFVKTLTGKTITLEVESSDTIDNVKAKI DKE IPPDQQRLIFAG QL+DGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 75.8702 bits (185), Expect = 3.872e-13
Identity = 39/56 (69.64%), Postives = 43/56 (76.79%), Query Frame = 3

Query:  708 MQIFVKPLTGKTITLKGESFEPIDNVKGKIQDKEGIPPDKRR*SFPANNLEDGGLL 875
            MQIFVK LTGKTITL+ ES + IDNVK KIQDKEGIPPD++R  F    LEDG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLTU (Ubiquitin OS=Solanum tuberosum GN=UBI3 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.237e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 143.665 bits (361), Expect = 1.512e-33
Identity = 73/75 (97.33%), Postives = 73/75 (97.33%), Query Frame = 3

Query:   27 QISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            QI  KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 140.969 bits (354), Expect = 9.802e-33
Identity = 72/76 (94.74%), Postives = 73/76 (96.05%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            MQIFVKTLTGKTITLEVESSDTIDNVKAKI DKE IPPDQQRLIFAG QL+DGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 75.8702 bits (185), Expect = 3.872e-13
Identity = 39/56 (69.64%), Postives = 43/56 (76.79%), Query Frame = 3

Query:  708 MQIFVKPLTGKTITLKGESFEPIDNVKGKIQDKEGIPPDKRR*SFPANNLEDGGLL 875
            MQIFVK LTGKTITL+ ES + IDNVK KIQDKEGIPPD++R  F    LEDG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: UBIQ_SOLLC (Ubiquitin OS=Solanum lycopersicum GN=UBI3 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.237e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 143.665 bits (361), Expect = 1.512e-33
Identity = 73/75 (97.33%), Postives = 73/75 (97.33%), Query Frame = 3

Query:   27 QISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            QI  KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 140.969 bits (354), Expect = 9.802e-33
Identity = 72/76 (94.74%), Postives = 73/76 (96.05%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            MQIFVKTLTGKTITLEVESSDTIDNVKAKI DKE IPPDQQRLIFAG QL+DGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 75.8702 bits (185), Expect = 3.872e-13
Identity = 39/56 (69.64%), Postives = 43/56 (76.79%), Query Frame = 3

Query:  708 MQIFVKPLTGKTITLKGESFEPIDNVKGKIQDKEGIPPDKRR*SFPANNLEDGGLL 875
            MQIFVK LTGKTITL+ ES + IDNVK KIQDKEGIPPD++R  F    LEDG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: UBIQ_PETCR (Ubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.237e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 143.665 bits (361), Expect = 1.512e-33
Identity = 73/75 (97.33%), Postives = 73/75 (97.33%), Query Frame = 3

Query:   27 QISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            QI  KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 140.969 bits (354), Expect = 9.802e-33
Identity = 72/76 (94.74%), Postives = 73/76 (96.05%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            MQIFVKTLTGKTITLEVESSDTIDNVKAKI DKE IPPDQQRLIFAG QL+DGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 75.8702 bits (185), Expect = 3.872e-13
Identity = 39/56 (69.64%), Postives = 43/56 (76.79%), Query Frame = 3

Query:  708 MQIFVKPLTGKTITLKGESFEPIDNVKGKIQDKEGIPPDKRR*SFPANNLEDGGLL 875
            MQIFVK LTGKTITL+ ES + IDNVK KIQDKEGIPPD++R  F    LEDG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: UBIQ_PEA (Ubiquitin OS=Pisum sativum GN=PU1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.237e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 143.665 bits (361), Expect = 1.512e-33
Identity = 73/75 (97.33%), Postives = 73/75 (97.33%), Query Frame = 3

Query:   27 QISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            QI  KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 140.969 bits (354), Expect = 9.802e-33
Identity = 72/76 (94.74%), Postives = 73/76 (96.05%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            MQIFVKTLTGKTITLEVESSDTIDNVKAKI DKE IPPDQQRLIFAG QL+DGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 75.8702 bits (185), Expect = 3.872e-13
Identity = 39/56 (69.64%), Postives = 43/56 (76.79%), Query Frame = 3

Query:  708 MQIFVKPLTGKTITLKGESFEPIDNVKGKIQDKEGIPPDKRR*SFPANNLEDGGLL 875
            MQIFVK LTGKTITL+ ES + IDNVK KIQDKEGIPPD++R  F    LEDG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: UBIQ_ORYSJ (Ubiquitin OS=Oryza sativa subsp. japonica GN=UBQ1 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.237e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 143.665 bits (361), Expect = 1.512e-33
Identity = 73/75 (97.33%), Postives = 73/75 (97.33%), Query Frame = 3

Query:   27 QISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            QI  KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 140.969 bits (354), Expect = 9.802e-33
Identity = 72/76 (94.74%), Postives = 73/76 (96.05%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            MQIFVKTLTGKTITLEVESSDTIDNVKAKI DKE IPPDQQRLIFAG QL+DGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 75.8702 bits (185), Expect = 3.872e-13
Identity = 39/56 (69.64%), Postives = 43/56 (76.79%), Query Frame = 3

Query:  708 MQIFVKPLTGKTITLKGESFEPIDNVKGKIQDKEGIPPDKRR*SFPANNLEDGGLL 875
            MQIFVK LTGKTITL+ ES + IDNVK KIQDKEGIPPD++R  F    LEDG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: UBIQ_NICSY (Ubiquitin OS=Nicotiana sylvestris GN=UBICEP52-7 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.237e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 143.665 bits (361), Expect = 1.512e-33
Identity = 73/75 (97.33%), Postives = 73/75 (97.33%), Query Frame = 3

Query:   27 QISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            QI  KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 140.969 bits (354), Expect = 9.802e-33
Identity = 72/76 (94.74%), Postives = 73/76 (96.05%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            MQIFVKTLTGKTITLEVESSDTIDNVKAKI DKE IPPDQQRLIFAG QL+DGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 75.8702 bits (185), Expect = 3.872e-13
Identity = 39/56 (69.64%), Postives = 43/56 (76.79%), Query Frame = 3

Query:  708 MQIFVKPLTGKTITLKGESFEPIDNVKGKIQDKEGIPPDKRR*SFPANNLEDGGLL 875
            MQIFVK LTGKTITL+ ES + IDNVK KIQDKEGIPPD++R  F    LEDG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: UBIQ_MAIZE (Ubiquitin OS=Zea mays GN=UBF9 PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.237e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 143.665 bits (361), Expect = 1.512e-33
Identity = 73/75 (97.33%), Postives = 73/75 (97.33%), Query Frame = 3

Query:   27 QISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            QI  KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 140.969 bits (354), Expect = 9.802e-33
Identity = 72/76 (94.74%), Postives = 73/76 (96.05%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            MQIFVKTLTGKTITLEVESSDTIDNVKAKI DKE IPPDQQRLIFAG QL+DGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 75.8702 bits (185), Expect = 3.872e-13
Identity = 39/56 (69.64%), Postives = 43/56 (76.79%), Query Frame = 3

Query:  708 MQIFVKPLTGKTITLKGESFEPIDNVKGKIQDKEGIPPDKRR*SFPANNLEDGGLL 875
            MQIFVK LTGKTITL+ ES + IDNVK KIQDKEGIPPD++R  F    LEDG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

[Close]

BLAST of EY659457 vs. ExPASy Swiss-Prot
Match: UBIQ_LUPPO (Ubiquitin OS=Lupinus polyphyllus PE=3 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.237e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 3

Query:  252 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 479
            MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 143.665 bits (361), Expect = 1.512e-33
Identity = 73/75 (97.33%), Postives = 73/75 (97.33%), Query Frame = 3

Query:   27 QISXKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 251
            QI  KTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    2 QIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 140.969 bits (354), Expect = 9.802e-33
Identity = 72/76 (94.74%), Postives = 73/76 (96.05%), Query Frame = 3

Query:  480 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKERIPPDQQRLIFAG*QLDDGRTLADYNIQKESTLHLVLRLRGG 707
            MQIFVKTLTGKTITLEVESSDTIDNVKAKI DKE IPPDQQRLIFAG QL+DGRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 76

HSP 4 Score: 75.8702 bits (185), Expect = 3.872e-13
Identity = 39/56 (69.64%), Postives = 43/56 (76.79%), Query Frame = 3

Query:  708 MQIFVKPLTGKTITLKGESFEPIDNVKGKIQDKEGIPPDKRR*SFPANNLEDGGLL 875
            MQIFVK LTGKTITL+ ES + IDNVK KIQDKEGIPPD++R  F    LEDG  L
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL 56

The following BLAST results are available for this feature:

BLAST of EY659457 vs. ExPASy Swiss-Prot

BLAST of EY659457 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_WHEAT	1.237e-35	100.00	Ubiquitin OS=Triticum aestivum PE=3 SV=1	[more]
UBIQ_SOYBN	1.237e-35	100.00	Ubiquitin OS=Glycine max GN=SUBI-1 PE=3 SV=1	[more]
UBIQ_SOLTU	1.237e-35	100.00	Ubiquitin OS=Solanum tuberosum GN=UBI3 PE=3 SV=1	[more]
UBIQ_SOLLC	1.237e-35	100.00	Ubiquitin OS=Solanum lycopersicum GN=UBI3 PE=3 SV=...	[more]
UBIQ_PETCR	1.237e-35	100.00	Ubiquitin OS=Petroselinum crispum GN=PCUBI4-1 PE=3...	[more]
UBIQ_PEA	1.237e-35	100.00	Ubiquitin OS=Pisum sativum GN=PU1 PE=3 SV=1	[more]
UBIQ_ORYSJ	1.237e-35	100.00	Ubiquitin OS=Oryza sativa subsp. japonica GN=UBQ1 ...	[more]
UBIQ_NICSY	1.237e-35	100.00	Ubiquitin OS=Nicotiana sylvestris GN=UBICEP52-7 PE...	[more]
UBIQ_MAIZE	1.237e-35	100.00	Ubiquitin OS=Zea mays GN=UBF9 PE=3 SV=1	[more]
UBIQ_LUPPO	1.237e-35	100.00	Ubiquitin OS=Lupinus polyphyllus PE=3 SV=1	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C1-101-009-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY659457 ID=EY659457; Name=EY659457; organism=Citrus sinensis; type=EST; length=952bp
ATTCAAAGCCCGACCCACGCGTCCGGCAAATCTCTGNGAAAACTCTCACC
GGCAAGACAATCACCCTTGAGGTTGAAAGCTCCGACACCATTGATAATGT
AAAAGCCAAGATCCAGGACAAGGAAGGGATCCCACCAGATCAGCAGAGGC
TTATCTTTGCTGGTAAACAGCTCGAGGATGGTCGCACACTCGCTGACTAT
AATATCCAGAAGGAATCAACCCTCCACTTGGTCCTTCGACTTAGGGGTGG
TATGCAGATCTTTGTAAAGACCCTCACTGGCAAGACGATTACTCTTGAGG
TGGAAAGCTCCGACACCATTGACAATGTGAAAGCCAAGATTCAAGACAAG
GAAGGGATCCCACCAGACCAACAGAGGCTTATCTTTGCTGGTAAACAGCT
TGAGGATGGTCGCACACTTGCTGATTATAACATCCAGAAGGAGTCAACCC
TCCACTTGGTCCTCCGTCTCCGTGGTGGTATGCAGATCTTTGTAAAGACC
CTCACTGGAAAGACTATCACCCTTGAGGTGGAAAGCTCCGACACCATTGA
CAATGTCAAAGCCAAAATTCATGATAAGGAAAGGATCCCACCAGACCAGC
AAAGGCTCATCTTTGCCGGGTAACAACTAGATGATGGACGCACACTTGCA
GACTACAACATCCAGAAAGAATCAACCCTCCATTTGGTCCTTCGTCTCAG
GGGTGGCATGCAGATTTTTGTGAAACCCCTGACTGGTAAGACTATAACTT
TGAAGGGTGAAAGCTTTGAACCGATCGACAATGTCAAGGGCAAGATCCAG
GACAAGGAAGGCATCCCACCTGACAAAAGAAGGTAATCTTTTCCGGCAAA
CAACTTGGAAGATGGCGGACTTTTGGTGCTTCAACATCCAAAGGGAGCAA
ACCCTCCTTTGGGGCCTTCGCCCCGGGGGGGCTGCAAATTCTTGGAAAAC
CC