CX300743
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT_MANSE (Actin, muscle OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.546e-36 Identity = 85/205 (41.46%), Postives = 127/205 (61.95%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD-------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D A+ + S K SYELPDG++++I NER++ PEALF+PS +G G+ + V ++ + + R D+ N ++SG T+YPG A+R+++E+ AL Sbjct: 124 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEK-SYELPDGQVITIGNERFRCPEALFQPSFLGM---ESCGIHETVYNSIMKCDVD--IRKDLYANTVMSGGTTMYPGIADRMQKEITAL 321
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT_CRAVI (Actin (Fragment) OS=Crassostrea virginica PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.546e-36 Identity = 82/204 (40.20%), Postives = 127/204 (62.25%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D + + S + SYELPDG++++I NER++ PEA+F+PS +G +G+ + Q++ + + R D+ NI++SG T++PG A+R+++EV L Sbjct: 40 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGM---ESAGIHETSYQSIMKCDVD--IRKDLYANIVLSGGTTMFPGIADRMQKEVTTL 237
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACTM_STYPL (Actin, muscle OS=Styela plicata PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.546e-36 Identity = 83/204 (40.69%), Postives = 126/204 (61.76%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+NVPAM++ + +L+ YASG TG+ + GDGV I GYALP+ I R D GRDL Y + + +RG SF+T+AE +I D+ +KL +A D + + S + SYELPDG++++I NER++ PE LF+PS +G SGV + ++ + + R D+ N ++SG T+YPG A+R+++E+ AL Sbjct: 127 MFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERG-YSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGM---ESSGVHETTYNSIMKC--DIDIRKDLYANNVLSGGTTMYPGIADRMQKEITAL 324
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACTC_BIOPF (Actin, cytoplasmic OS=Biomphalaria pfeifferi PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.546e-36 Identity = 81/204 (39.71%), Postives = 126/204 (61.76%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D + T S + SYELPDG++++I NER++ PEA+F+PS +G +G+ + ++ + + R D+ N ++SG T++PG A+R+++E+ AL Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAATSSSLEKSYELPDGQVITIGNERFRCPEAVFQPSFLGM---ESAGIHETTYNSIMKCDVD--IRKDLYANTVLSGGSTMFPGIADRMQKEITAL 321
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACTC_BIOOB (Actin, cytoplasmic OS=Biomphalaria obstructa PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.546e-36 Identity = 81/204 (39.71%), Postives = 126/204 (61.76%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D + + S + SYELPDG++++I NER++ PEALF+PS +G +G+ + ++ + + R D+ N ++SG T++PG A+R+++E+ AL Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMQTATSSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM---EAAGIHETTYNSIMKCDVD--IRKDLYANTVLSGGSTMFPGIADRMQKEITAL 321
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACTB_XENTR (Actin, cytoplasmic 1 OS=Xenopus tropicalis GN=actb PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.546e-36 Identity = 82/204 (40.20%), Postives = 125/204 (61.27%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D + + S + SYELPDG++++I NER++ PEALF+PS +G G+ + ++ + + R D+ N ++SG T+YPG A+R+++E+ AL Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM---ESCGIHETTYNSIMKCDVD--IRKDLYANTVLSGGTTMYPGIADRMQKEITAL 320
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACTB_XENLA (Actin, cytoplasmic 1 OS=Xenopus laevis GN=actb PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.546e-36 Identity = 82/204 (40.20%), Postives = 125/204 (61.27%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D + + S + SYELPDG++++I NER++ PEALF+PS +G G+ + ++ + + R D+ N ++SG T+YPG A+R+++E+ AL Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM---ESCGIHETTYNSIMKCDVD--IRKDLYANTVLSGGTTMYPGIADRMQKEITAL 320
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACTB_OREMO (Actin, cytoplasmic 1 OS=Oreochromis mossambicus GN=actb PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.546e-36 Identity = 82/204 (40.20%), Postives = 125/204 (61.27%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D + + S + SYELPDG++++I NER++ PEALF+PS +G G+ + ++ + + R D+ N ++SG T+YPG A+R+++E+ AL Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM---ESCGIHETTYNSIMKCDVD--IRKDLYANTVLSGGTTMYPGIADRMQKEITAL 320
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACTB_CERPY (Actin, cytoplasmic 1 OS=Cercopithecus pygerythrus GN=ACTB PE=1 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.546e-36 Identity = 83/205 (40.49%), Postives = 124/205 (60.49%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEED-GARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +R SF T+AE +I D+ +KL +A D + + S + SYELPDG++++I NER++ PEALF+PS +G I + T + + + D R D+ N ++SG T+YPG A+R+++E+ AL Sbjct: 108 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERYGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIH------ETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL 306
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACTB1_TAKRU (Actin, cytoplasmic 1 OS=Takifugu rubripes GN=actba PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 5.546e-36 Identity = 82/204 (40.20%), Postives = 125/204 (61.27%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D + + S + SYELPDG++++I NER++ PEALF+PS +G G+ + ++ + + R D+ N ++SG T+YPG A+R+++E+ AL Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM---ESCGIHETTYNSIMKCDVD--IRKDLYANTVLSGGTTMYPGIADRMQKEITAL 320 The following BLAST results are available for this feature:
BLAST of CX300743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300743 ID=CX300743; Name=CX300743; organism=Citrus sinensis; type=EST; length=596bpback to top |