CX300743
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT1_SCHMA (Actin-1 OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 155.606 bits (392), Expect = 1.724e-37 Identity = 84/204 (41.18%), Postives = 127/204 (62.25%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+NVPAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D + + S + SYELPDG++++I NER++ PEALF+PS +G SG+ + ++ + + R D+ N ++SG T+YPG A+R+++E+ AL Sbjct: 124 MFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYMMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSALEKSYELPDGQVITIGNERFRCPEALFQPSFLGM---EASGIHETTYNSIMKCDVD--IRKDLYSNTVLSGGSTMYPGIADRMQKEISAL 321
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT_ACHBI (Actin OS=Achlya bisexualis PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 2.941e-37 Identity = 90/204 (44.12%), Postives = 125/204 (61.27%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD-----ASLTHSCG-KLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+NVPAM++ + +L+ YASG TG + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL IA D + S G + SYELPDG +L I NER++ PE LF+P+L+G SG+ D QT+ + + R D+ NI++SG T+YPG +ER+ +E+ AL Sbjct: 124 MFETFNVPAMYVNIQAVLSLYASGRTTGCVLDSGDGVSHTVPIYEGYALPHAIVRLDLAGRDLTDYMMKILTERG-YSFTTTAEREIVRDIKEKLTYIALDFDQEMKTAAESSGLEKSYELPDGNVLVIGNERFRTPEVLFQPALIGK---EASGIHDCTFQTIMKCDVD--IRKDLYCNIVLSGGTTMYPGISERMTKELTAL 321
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT3_BACDO (Actin-3, muscle-specific OS=Bactrocera dorsalis PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 5.016e-37 Identity = 86/205 (41.95%), Postives = 129/205 (62.93%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD-------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D A+ + S K SYELPDG++++I NER++ PE+LF+PS +G SG+ + V ++ + + R D+ NI++SG T+YPG A+R+++E+ AL Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEK-SYELPDGQVITIGNERFRCPESLFQPSFLGM---ESSGIHETVYNSIMKCDVD--IRKDLYANIVMSGGTTMYPGIADRMQKEITAL 321
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT2_BACDO (Actin-2, muscle-specific OS=Bactrocera dorsalis PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 8.557e-37 Identity = 86/205 (41.95%), Postives = 129/205 (62.93%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD-------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D A+ + S K SYELPDG++++I NER++ PE+LF+PS +G SG+ + V ++ + + R D+ NI++SG T+YPG A+R+++E+ AL Sbjct: 124 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEK-SYELPDGQVITIGNERFRCPESLFQPSFLGM---ESSGIHETVYNSIMKCDVD--IRKDLYANIVMSGGTTMYPGIADRMQKEITAL 321
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT1_PHYIN (Actin-1 OS=Phytophthora infestans GN=ACTA PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 8.557e-37 Identity = 89/204 (43.63%), Postives = 124/204 (60.78%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD-----ASLTHSCG-KLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+NVPAM++ + +L+ YASG TG + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL IA D + S G + SYELPDG ++ I NER++ PE LF+PSL+G SG+ + QT+ + + R D+ NI++SG T+YPG ER+ +E+ AL Sbjct: 124 MFETFNVPAMYVNIQAVLSLYASGRTTGCVLDSGDGVSHTVPIYEGYALPHAIVRLDLAGRDLTDYMMKILTERG-YSFTTTAEREIVRDIKEKLTYIALDFDQEMKTAAESSGLEKSYELPDGNVIVIGNERFRTPEVLFQPSLIGK---EASGIHECTFQTIMKCDVD--IRKDLYCNIVLSGGTTMYPGIGERMTKELTAL 321
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACTB3_TAKRU (Actin, cytoplasmic 3 OS=Takifugu rubripes GN=actbc PE=2 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.118e-36 Identity = 86/205 (41.95%), Postives = 127/205 (61.95%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD-------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D AS + S K SYELPDG++++I NER++ PEALF+PS +G SG+ + ++ + + R D+ N ++SG T+YPG A+R+++E+ AL Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMATASSSSSLEK-SYELPDGQVITIGNERFRCPEALFQPSFLGM---ESSGIHETTYNSIMKCDVD--IRKDLYANTVLSGGTTMYPGIADRMQKEITAL 320
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT1_ONCVO (Actin-1 OS=Onchocerca volvulus GN=act-1a PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.118e-36 Identity = 85/205 (41.46%), Postives = 127/205 (61.95%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEED-GARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D + + S + SYELPDG+++++ NER++ PEALF+PS +G A + + T + + + D R D+ NI++SG T+YPG A+R+++EV AL Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGME------SAGIHESTYNSIMKCDIDIRKDLYANIVLSGGTTMYPGIADRMQKEVTAL 321
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT23_DICDI (Putative actin-23 OS=Dictyostelium discoideum GN=act23 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.460e-36 Identity = 82/203 (40.39%), Postives = 126/203 (62.07%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD-----ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D + T S + SYELPDG++++I NER++ PEALF+PS +G +G+ + ++ + + R D+ N+++SG T++PG A+R+ +E+ AL Sbjct: 108 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLAYVALDFEAEMQTATSSALEKSYELPDGQVITIGNERFRCPEALFQPSFLGM---ESAGIHETTYNSIMKCDVD--IRKDLYGNVVLSGGTTMFPGIADRMNKELTAL 304
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT1_ARTSX (Actin, clone 205 OS=Artemia sp. PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.460e-36 Identity = 87/205 (42.44%), Postives = 127/205 (61.95%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD-------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D A+ + S K SYELPDG++L+I NER++ PEALF+PS +G G+ + V T+ + + R D+ N ++SG T+YPG A+R+++E+ AL Sbjct: 124 MFETFNSPAMYVAIQAVLSLYASGRTTGVVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEK-SYELPDGQVLTIGNERFRCPEALFQPSFLGM---ESCGIHETVYNTIMKCDVD--IRKDLYANTVLSGGTTMYPGIADRMQKEITAL 321
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT11_ARATH (Actin-11 OS=Arabidopsis thaliana GN=ACT11 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 1.460e-36 Identity = 85/204 (41.67%), Postives = 125/204 (61.27%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF TSAE +I DV +KL IA D + T S + SYELPDG++++I ER++ PE LF+PSL+G +G+ + ++ + + R D+ NI++SG T++PG A+R+ +E+ AL Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTSAEREIVRDVKEKLAYIALDYEQEMETANTSSSVEKSYELPDGQVITIGGERFRCPEVLFQPSLVGM---EAAGIHETTYNSIMKCDVD--IRKDLYGNIVLSGGTTMFPGIADRMSKEITAL 322 The following BLAST results are available for this feature:
BLAST of CX300743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300743 ID=CX300743; Name=CX300743; organism=Citrus sinensis; type=EST; length=596bpback to top |