CX300743
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACTT1_HUMAN (Actin-related protein T1 OS=Homo sapiens GN=ACTRT1 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 3.490e-22 Identity = 65/202 (32.18%), Postives = 108/202 (53.47%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIA--PDASLTHSCGKL--SYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET++VP ++ + YAS TGL V GDGV T I GY+LP+ +++ GRD+ ++ ++ G +F + ++ +KL IA P+ L S G++ +Y LPDG ++ +E YQ+PE LF P +G G++ +V ++ + + + + +I++SG TL PG ERL +EV+ L Sbjct: 126 MFETFSVPGFYLSNHAVAALYASACVTGLVVDSGDGVTCTVPIFEGYSLPHAVTKLCMAGRDITEHLTRLLFASG-FNFPCILNKAVVNNIKEKLCYIALEPEKELRKSRGEVLGAYRLPDGHVIHFGDELYQVPEVLFAPDQLGI---HSPGLSKMVSSSIMKC--DTDIQNKLYADIVLSGGTTLLPGLEERLMKEVEQL 321
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ARP2_YEAST (Actin-related protein 2 OS=Saccharomyces cerevisiae GN=ARP2 PE=1 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.558e-22 Identity = 63/204 (30.88%), Postives = 105/204 (51.47%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPDASLTHSCGK------LSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFE Y+ +++ + +L YA G +G+ V GDGV + L + R D GRD+ ++ I + +RG +F +A+F+ + +KL ++ D L + SYELPDG + + ER++ PE LF+P L+ GV +L+ T+ + R+ + K I++SG ++YPG RLE+E+K L Sbjct: 126 MFEKYDFGGVYVAIQAVLALYAQGLSSGVVVDSGDGVTHIVPVYESVVLSHLTRRLDVAGRDVTRHLIDLLSRRG-YAFNRTADFETVRQIKEKLCYVSYDLDLDTKLARETTALVESYELPDGRTIKVGQERFEAPECLFQPGLVDVEQ---PGVGELLFNTVQSADVD--IRSSLYKAIVLSGGSSMYPGLPSRLEKELKQL 323
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACL7B_RAT (Actin-like protein 7B OS=Rattus norvegicus GN=Actl7b PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.558e-22 Identity = 65/202 (32.18%), Postives = 107/202 (52.97%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQK--LGLIAPDASLTHSCGKL--SYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+ +PAM + +L+ Y+ G +GL V G GV IS G LP SR D+ G DL Y + + + G + + I + +K + P+ ++ +L YELPDG++++I ER++ E LF+PSL+GS+ G+ +L L R + G + ++A N+++ G T+ GF ER ++E+ L Sbjct: 169 MFETFGIPAMHVTSQALLSIYSYGKTSGLVVESGHGVSHVVPISEGDLLPGLPSRVDYAGCDLTNYLMQLLNEAGHK--FSDDHLHIIEHIKKKCCYAALLPEEEMSLGLDELHVDYELPDGKVITIGQERFRCSEMLFKPSLVGSTQ---PGLPELTATCLDRC-QGTGFKEEMAANVLLCGGCTMLDGFPERFQRELSLL 364
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACL7B_MACFA (Actin-like protein 7B OS=Macaca fascicularis GN=ACTL7B PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.558e-22 Identity = 65/202 (32.18%), Postives = 105/202 (51.98%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIA----PDASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MF T+ +PAM + ++L+ Y+ G +GL V G GV IS G LP SR+D+ G DL Y + + + G T I + +K A + L ++ YELPDG++++I ER++ E LF+PSL GS+ G+ +L L R ++ G + ++A N+++ G T+ GF ER ++E+ L Sbjct: 167 MFGTFGIPAMHVTSQSLLSIYSYGKTSGLVVESGHGVSHVVPISEGDVLPGLTSRADYAGGDLTNYLMQLLNEAGHA--FTDDHLHIIEHIKKKCCYAAFLPEEELGLVPEELRVDYELPDGKLITIGQERFRCSEMLFQPSLAGSTQ---PGLPELTAACLGRC-QDTGFKEEMAANVLLCGGCTMLDGFPERFQRELSLL 362
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACTT2_MOUSE (Actin-related protein T2 OS=Mus musculus GN=Actrt2 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 5.953e-22 Identity = 67/206 (32.52%), Postives = 109/206 (52.91%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIA--PDASLTHSCGKL--SYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAK----NIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+ VPA ++ +L Y+S TGL V GDGV T I GY+LP+ +S+ G+D+ + + G R+F E +A D+ +KL +A P+ L+ + Y+LPDG ++ I ++ YQ PE LF P +G+ G+A + ++++ AD+ K I++SG TL+ G +RL +E++ L Sbjct: 127 MFETFEVPAFYLSDQAVLALYSSACVTGLVVDSGDGVTCTVPIYEGYSLPHAVSKLYVAGKDITELLTRLLLASG-RAFPCPLEKALADDIKEKLCYVALEPEEELSRRAEDVLREYKLPDGNVIYIGDQLYQAPEVLFSPDQLGTHG---PGLAQMASNSITK------CDADIQKTLFGEIVLSGGSTLFQGLDDRLLKELEQL 322
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACTT1_MACFA (Actin-related protein T1 OS=Macaca fascicularis GN=ACTRT1 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.775e-22 Identity = 64/202 (31.68%), Postives = 107/202 (52.97%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIA--PDASLTHSCGKL--SYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFE ++VP ++ + YAS TGL V GDGV I GY+LP+ +++ GRD+ ++ ++ G +F +A ++ +KL IA P+ L S G++ +Y LPDG ++ +E YQ+PE LF P +G G++ +V ++ + + + + I++SG TL+PG ERL +EV+ L Sbjct: 125 MFENFSVPGFYLSNHAVAALYASACVTGLVVDSGDGVTCAVPIFEGYSLPHAVTKLYTAGRDITEHLTQLLFANG-FNFPCILNKAVANNIKEKLCYIALEPEKELRKSRGEVLGAYRLPDGHVIHFGDELYQVPEVLFAPDQLGI---HSPGLSKMVSSSIMKC--DTDIQNKLYAEIVLSGGTTLFPGLEERLMKEVEQL 320
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACL7B_MOUSE (Actin-like protein 7B OS=Mus musculus GN=Actl7b PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.262e-21 Identity = 64/202 (31.68%), Postives = 107/202 (52.97%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQK--LGLIAPDASLTHSCGKL--SYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 +FET+ +PAM + +L+ Y+ G +GL V G GV IS G LP SR D+ G DL Y + + + G + + I + +K + P+ ++ +L YELPDG+I++I ER++ E LF+PSL+G + G+ +L L+R + G + ++A N+++ G T+ GF ER ++E+ L Sbjct: 170 LFETFGIPAMHVTSQALLSIYSYGKTSGLVVESGHGVSHVVPISEGDLLPGLPSRVDYAGCDLTNYLMQLLNEAGHK--FSDDHLHIIEHIKKKCCYAALLPEEEMSLGLDELHVDYELPDGKIITIGQERFRCSEMLFKPSLVGCTQ---PGLPELTATCLARC-QGTGFKEEMAANVLLCGGCTMLDGFPERFQRELSLL 365
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT29_DICDI (Putative actin-29 OS=Dictyostelium discoideum GN=act29 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 5.040e-21 Identity = 60/203 (29.56%), Postives = 110/203 (54.19%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPDASLTHSCGKL-------SYELPDGEILSIQNERYQIPEALFRPSLMG-SSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEV 587 MFET++ P ++ ++L+ Y+ G G+ + G+ + T I G+++PN+I++ + G + +Y + + + +F TS+E +I D+ +K G I+ + + K+ SY+LPDG++++I ER+ E LF PSL+ SY GV L+ ++ E R + NII+SG T+ P F +R++ E+ Sbjct: 130 MFETFDTPNFYLANQSVLSLYSKGRLNGIVLDSGNNITYTVPIYEGHSIPNSINQLEIAGNSVTEYLMKILNENRGYNFTTSSEKEIVKDIKEKFGFISLNYNNDLYSTKVATNEIEKSYQLPDGQMITIGKERFICGEVLFEPSLVNIESY----GVHQLLYNSIINCDFE--IRRGLYNNIILSGGTTMLPDFNDRIKNEL 326
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT2_DAUCA (Actin-2 OS=Daucus carota PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.582e-21 Identity = 69/208 (33.17%), Postives = 110/208 (52.88%), Query Frame = 3 Query: 3 MFETYNVPAMFI--EVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLI------APDASLTHSCGKLSYELPDGEILSIQNERYQ-IPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFA-ERLEQEVKAL 596 MFET+NVPAM++ + + L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL + + +RG T+ + + + L+ P A L + +YELPDG++++I R PE LF+PS++G +G+ + ++ + + R D+ NI++SG T++PG + +E+ AL Sbjct: 127 MFETFNVPAMYVLSRLRSCLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDGLMKILTERGYMFTTTATGMSYMKEKLAYVALVMSKSWRLPRARL---LVEKNYELPDGQVITIGAVRGSGCPEVLFQPSMIGM---ESAGIHETTYNSIMKCDVD--IRKDLYGNIVLSGGSTMFPGSCYASMSKEITAL 326
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACTT2_MACFA (Actin-related protein T2 OS=Macaca fascicularis GN=ACTRT2 PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 4.266e-20 Identity = 65/206 (31.55%), Postives = 107/206 (51.94%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIA--PDASLTHSCGKL--SYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAK----NIIVSGAPTLYPGFAERLEQEVKAL 596 MFE + VPA ++ +L YAS TGL V GDGV T I GY+LP+ +++ GRD+ + + G +F + + D+ +KL +A P+ L+ ++ Y+LPDG I+S+ + Q PEALF P +G G++ +V ++++ AD+ K I++SG TL+ G +RL +E++ L Sbjct: 127 MFENFGVPAFYLSDQAVLALYASACVTGLVVDSGDGVTCTVPIFEGYSLPHAVTKLHVAGRDITELLTQLLLASG-HTFSCELDKGLVDDIKKKLCYVALEPEKELSRRPEEVLREYKLPDGNIISLGDPLCQAPEALFAPQQLGC---QSPGLSHMVSSSITK------CDADIQKILFGEIVLSGGTTLFHGLDDRLLKELEQL 322 The following BLAST results are available for this feature:
BLAST of CX300743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300743 ID=CX300743; Name=CX300743; organism=Citrus sinensis; type=EST; length=596bpback to top |