CX300743
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACTT1_RAT (Actin-related protein T1 OS=Rattus norvegicus GN=Actrt1 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.896e-18 Identity = 59/201 (29.35%), Postives = 106/201 (52.74%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPDASLTHSCGKLS---YELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFE +NVPA+++ + AS TGL + GDGV T I GY+LP I++ GRD+ ++ + +G +F + D+ +KL ++ + + C + S Y+LPDG + + + Q+PE LF P +G +D G++ +V ++ + + + ++ I++SG TL+PG +RL +E++ L Sbjct: 127 MFEKFNVPALYLCNHAVGALCASACITGLVLDSGDGVTCTVPIYEGYSLPRAITKLYVAGRDITEHLTRLLLAKG-YTFPCILNKAVVDDIKEKLCTVSWGSKDSEKCYQRSLSEYKLPDGNTIQMSDHLCQVPEVLFTPEHLG-IHD--LGISKMVCNSIMKC--DTDIQENLFAEIVLSGGTTLFPGLQDRLLKELEVL 321
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ARPM1_HUMAN (Actin-related protein M1 OS=Homo sapiens GN=ARPM1 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.162e-17 Identity = 56/198 (28.28%), Postives = 97/198 (48.99%), Query Frame = 3 Query: 6 FETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIA----PDASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEV 587 FE VPA ++ + +L +A+G TGL + G GV + I GY LP+ + + D G DL Y + M G L++++ +I D+ + +A + + C + Y+LPDG+++ + ++ + PEALF P M I + S + + G R NII++G T +PG +RL +++ Sbjct: 123 FEHLGVPAFYMSIQAVLALFAAGFTTGLVLNSGAGVTQSVPIFEGYCLPHGVQQLDLAGLDLTNYLMVLMKNHG-IMLLSASDRKIVEDIKESFCYVAMNYEEEMAKKPDCLEKVYQLPDGKVIQLHDQLFSCPEALFSPCHMNLEAPGIDKIC-----FSSIMKCDTGLRNSFFSNIILAGGSTSFPGLDKRLVKDI 314
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ARP3_DICDI (Actin-related protein 3 OS=Dictyostelium discoideum GN=arpC PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.191e-16 Identity = 66/218 (30.28%), Postives = 102/218 (46.79%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTK-------TGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPDASLTHSCGKLSYELPDGEILSIQ---------------NERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVK 590 MFET+NVP ++I V +L AS T TG + GDGV IS GY + ++I GRD++ Y M +R E + + +IA V ++ + PD + GK E PD I +I ER+ PE F P + S Y ++ + +V T+ P + R + KNI++SG T++ F +RL+++VK Sbjct: 131 MFETFNVPGLYIAVQAVLALAASWTSKNAEKTLTGTVIDSGDGVTHVIPISEGYVIGSSIKHIPIAGRDISSYVQQIMRER-EPNIPPAESLEIAKRVKEQYSYVCPD--IVKEFGKYDSE-PDKWIKTINAQDSVTKKPFSYDVGYERFLGPELFFNPEIASSDY--LTPLPKVVDDTIQSCPID--CRRGLYKNIVLSGGSTMFKDFGKRLQRDVK 340
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACTT1_MOUSE (Actin-related protein T1 OS=Mus musculus GN=Actrt1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.326e-16 Identity = 57/201 (28.36%), Postives = 104/201 (51.74%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPDASLTH-SCGKL--SYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFE +NVPA+++ + AS TGL + GDGV T + GY+LP+ I++ GRD+ ++ + +G +F + D+ +KL ++ T +C + Y LPDG + + + Q+PE LF P +G +D G++ +V ++ + + ++ I++SG T++PG +RL +E++ L Sbjct: 127 MFEKFNVPALYLCNHAVGALCASACITGLVLDSGDGVTCTVPVYEGYSLPHAITKLYVAGRDITEHLTRLLLAKG-YTFPCILNKAVVDDIKEKLCTVSLGYKDTEKNCQQFLRKYTLPDGNTIQMSDHLCQVPEVLFTPDHLG-IHD--LGISKMVCNSIMNC--DTDIQENLFAEIVLSGGTTMFPGLQDRLLKELEDL 321
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT10_SOLTU (Actin-85C (Fragment) OS=Solanum tuberosum GN=AC85C PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 8.326e-16 Identity = 43/91 (47.25%), Postives = 58/91 (63.74%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDV 275 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL + + + +RG SF T+AE +I DV Sbjct: 105 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERG-YSFTTTAEREIVRDV 194
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACTL9_HUMAN (Actin-like protein 9 OS=Homo sapiens GN=ACTL9 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.420e-15 Identity = 56/198 (28.28%), Postives = 95/198 (47.98%), Query Frame = 3 Query: 6 FETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPDASLTHSCGKLSY----ELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEV 587 FE+ PAM++ ++L+ YA G +GL V G GV T + GY L + R D G L + + Q G L + + ++ +A D + + Y +LPDG +++ E +Q PE LF P + S G++ + +Q+L ++ E RAD+A+N+++ G +L+ GF R E+ Sbjct: 167 FESLRSPAMYVASQSVLSVYAHGRVSGLVVDTGHGVTYTVPVFQGYNLLHATERLDLAGNHLTAFLAEMLLQAGLP--LGQQDLDLVENIKHHYCYVASDFQKEQARPEQEYKRTLKLPDGRTVTLGKELFQCPELLFNPPEVPGL--SPVGLSTMAKQSLRKLSLE--MRADLAQNVLLCGGSSLFTGFEGRFRAEL 358
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ARP4_ARATH (Actin-related protein 4 OS=Arabidopsis thaliana GN=ARP4 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.855e-15 Identity = 57/236 (24.15%), Postives = 104/236 (44.07%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRG---------ERSFLTSAEFQ--------------------IAGDVIQKLGLIAP---DASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLM---------GSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEV 587 MFE Y VPA+F+ +L +A+G T L V CG G + +GY L + S GG L + ++ +G +R + + EFQ I GD+ + + D + SYELPDG+ L I +R+++P+ +F PS++ S+ G+ +V +++++ + R ++ +I+++G + ERLE+++ Sbjct: 147 MFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKGIKIRPRYSFKRKEVRAGEFQVEDVDIPDTTESYKLFCQRMIVGDIKDSICRVPDTPYDDKSYSNIPTTSYELPDGQTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCDVD--IRRELYSSILLAGGTSSMQQLKERLEKDL 380
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT28_DICDI (Putative actin-28 OS=Dictyostelium discoideum GN=act28 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.855e-15 Identity = 54/200 (27.00%), Postives = 95/200 (47.50%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPDA--SLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+ PA+++E + + Y SG TG+ + GD + G ALP S F G DL + G + E +I D+ +KL ++ D + + SYELPDG++++I E E LF P + + ++ G+ + ++ + + D+ N+++SG T++PG R+ +E+ L Sbjct: 115 MFETFKTPAIYVENQAVFSIYNSGRMTGIVLDSGDSASHVVPVYEGLALPLATSSLGFAGCDLTDQMSLLLNDLG-----YNLEREIVRDIKEKLSYVSSDFLWEIDDPSLEKSYELPDGQVITIGKELLACSEGLFLPYVFFGT--NLDGIDKAIYNSIMKCDVD--IHNDLYGNVVLSGGSTMFPGIEYRMYKELTQL 305
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ARP3_ACACA (Actin-related protein 3 OS=Acanthamoeba castellanii GN=ARP3 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.570e-14 Identity = 59/223 (26.46%), Postives = 101/223 (45.29%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTK--------TGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAE-FQIAGDVIQKLGLIAPDA------------------SLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVK 590 MFET+NVP ++I V +L AS T TG + GDGV ++ GY + ++I GRD+ + + + +R E+ + AE ++A + + + PD S GK Y + G ER+ PE F P + S D ++ + +V +T+ P + R + KNI++SG T++ F +RL++++K Sbjct: 138 MFETFNVPGLYIAVQAVLALAASWTSKQVTEKTLTGTVIDSGDGVTHVIPVAEGYVIGSSIKHIPLAGRDITNFVLQLLRERNEK--IPPAETLEVAKRIKETFSYVCPDIVKEFKKYDTEPDKWFKTYEGIESVGKKPYNVDVG------YERFLGPEIFFNPEIFSS--DFLTPLPKVVDETIQSCPID--TRRGLYKNIVLSGGSTMFKDFGKRLQRDIK 348
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ARP7_ARATH (Actin-related protein 7 OS=Arabidopsis thaliana GN=ARP7 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.498e-14 Identity = 51/194 (26.29%), Postives = 89/194 (45.88%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPDASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQE 584 MFET+NV + +L+ YA G +G TV G G + + G R + GG +L + F + + L+ ++ + + T +C + LPDG+++SI ERY + EALF+PS++G G+ + + + +S V E+ + +N ++ G T GF R ++E Sbjct: 111 MFETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTELTKLFAQELGKTNPSMNLSMSDVEKLKEQYANCAEDEIAYKKTQNCEIEQHTLPDGQVISIGRERYSVGEALFQPSILGLEE---HGIVEQLVRIISTVSSEN--HRQLLENTVLCGGTTSMTGFESRFQKE 299 The following BLAST results are available for this feature:
BLAST of CX300743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300743 ID=CX300743; Name=CX300743; organism=Citrus sinensis; type=EST; length=596bpback to top |