CX300743
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ARP3_CHICK (Actin-related protein 3 OS=Gallus gallus GN=ACTR3 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.244e-11 Identity = 56/221 (25.34%), Postives = 94/221 (42.53%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTK--------TGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPDASLTHSCGKLSYELPDGE-----------------ILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVK 590 MFE++NVP ++I V +L AS T TG + GDGV ++ GY + + I GRD+ YFI + + E + A V ++ + PD L K DG + + ER+ PE F P ++ D ++++V + + P + R + KNI++SG T++ F RL++++K Sbjct: 130 MFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT-YFIQQLLREREVGIPPEQSLETAKAVKERFSYVCPD--LVKEFNKYD---TDGTKWIKQYTGINAISKKEFTIDVGYERFLGPEIFFHPEF--ANPDFTQPISEVVDEVIQNCPID--VRRPLYKNIVLSGGSTMFRDFGRRLQRDLK 340
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT3_LYTPI (Actin, cytoskeletal 3 (Fragment) OS=Lytechinus pictus PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.625e-11 Identity = 39/121 (32.23%), Postives = 72/121 (59.50%), Query Frame = 3 Query: 249 AEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKA 593 AE +I ++ +KL +A D + + S + SYELPDG++++I NER++ PEALF+PS +G +G+ + ++ + + R + N ++SG T++PG A+R+++E+ A Sbjct: 1 AEREIVRNIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM---ESAGIHETCYNSIMKCDVD--IRKFLYANTVLSGGSTMFPGIADRMQKEITA 116
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ARP3_RAT (Actin-related protein 3 OS=Rattus norvegicus GN=Actr3 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.772e-11 Identity = 56/221 (25.34%), Postives = 94/221 (42.53%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTK--------TGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPDASLTHSCGKLSYELPDGE-----------------ILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVK 590 MFE++NVP ++I V +L AS T TG + GDGV ++ GY + + I GRD+ YFI + + E + A V ++ + PD L K DG + + ER+ PE F P ++ D ++++V + + P + R + KNI++SG T++ F RL++++K Sbjct: 130 MFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT-YFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPD--LVKEFNKYD---TDGSKWIKQYTGVNAISKKEFSIDVGYERFLGPEIFFHPEF--ANPDFTQPISEVVDEVIQNCPID--VRRPLYKNIVLSGGSTMFRDFGRRLQRDLK 340
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ARP3_PONAB (Actin-related protein 3 OS=Pongo abelii GN=ACTR3 PE=2 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 2.772e-11 Identity = 56/221 (25.34%), Postives = 94/221 (42.53%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTK--------TGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPDASLTHSCGKLSYELPDGE-----------------ILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVK 590 MFE++NVP ++I V +L AS T TG + GDGV ++ GY + + I GRD+ YFI + + E + A V ++ + PD L K DG + + ER+ PE F P ++ D ++++V + + P + R + KNI++SG T++ F RL++++K Sbjct: 130 MFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT-YFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPD--LVKEFNKYD---TDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEF--ANPDFTQPISEVVDEVIQNCPID--VRRPLYKNIVLSGGSTMFRDFGRRLQRDLK 340
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ARP3_MOUSE (Actin-related protein 3 OS=Mus musculus GN=Actr3 PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 2.772e-11 Identity = 56/221 (25.34%), Postives = 94/221 (42.53%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTK--------TGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPDASLTHSCGKLSYELPDGE-----------------ILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVK 590 MFE++NVP ++I V +L AS T TG + GDGV ++ GY + + I GRD+ YFI + + E + A V ++ + PD L K DG + + ER+ PE F P ++ D ++++V + + P + R + KNI++SG T++ F RL++++K Sbjct: 130 MFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT-YFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPD--LVKEFNKYD---TDGSKWIKQYTGVNAISKKEFSIDVGYERFLGPEIFFHPEF--ANPDFTQPISEVVDEVIQNCPID--VRRPLYKNIVLSGGSTMFRDFGRRLQRDLK 340
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ARP3_HUMAN (Actin-related protein 3 OS=Homo sapiens GN=ACTR3 PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 2.772e-11 Identity = 56/221 (25.34%), Postives = 94/221 (42.53%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTK--------TGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPDASLTHSCGKLSYELPDGE-----------------ILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVK 590 MFE++NVP ++I V +L AS T TG + GDGV ++ GY + + I GRD+ YFI + + E + A V ++ + PD L K DG + + ER+ PE F P ++ D ++++V + + P + R + KNI++SG T++ F RL++++K Sbjct: 130 MFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT-YFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPD--LVKEFNKYD---TDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEF--ANPDFTQPISEVVDEVIQNCPID--VRRPLYKNIVLSGGSTMFRDFGRRLQRDLK 340
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ARP3_BOVIN (Actin-related protein 3 OS=Bos taurus GN=ACTR3 PE=1 SV=3) HSP 1 Score: 68.5514 bits (166), Expect = 2.772e-11 Identity = 56/221 (25.34%), Postives = 94/221 (42.53%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTK--------TGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPDASLTHSCGKLSYELPDGE-----------------ILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVK 590 MFE++NVP ++I V +L AS T TG + GDGV ++ GY + + I GRD+ YFI + + E + A V ++ + PD L K DG + + ER+ PE F P ++ D ++++V + + P + R + KNI++SG T++ F RL++++K Sbjct: 130 MFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDIT-YFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPD--LVKEFNKYD---TDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEF--ANPDFTQPISEVVDEVIQNCPID--VRRPLYKNIVLSGGSTMFRDFGRRLQRDLK 340
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ARP3_DROME (Actin-related protein 3 OS=Drosophila melanogaster GN=Arp66B PE=1 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 4.728e-11 Identity = 55/220 (25.00%), Postives = 95/220 (43.18%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASG--------TKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPDASLTHSCGKLSYELPDGEIL----------------SIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVK 590 MFET+NVP ++I V +L AS T TG+ V GDGV ++ GY + + I GR++ FI ++ + E + A + +K I PD + + Y+ G+ + + ER+ PE F P S+ D ++++V + P + R + NI++SG T++ F RL++++K Sbjct: 130 MFETFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRNITS-FIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEFA----KYDTEPGKWIRNFSGVNTVTKAPFNVDVGYERFLGPEIFFHPEF--SNPDFTIPLSEIVDNVIQNCPID--VRRPLYNNIVLSGGSTMFKDFGRRLQRDIK 340
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: CT134_MOUSE (Putative uncharacterized actin family protein C20orf134 homolog OS=Mus musculus PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.175e-11 Identity = 55/205 (26.83%), Postives = 93/205 (45.37%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMY--------QRGERSFLTSAEFQIAGDVIQKLGLIAPDASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKA 593 +FE VPA + +L + G +GL V G GV I G++ R + G L++YF + Q R +T + + + G I A +C + L +G + + +ER++ PE +F+PSL+G G+ L Q L ++P R +A ++++G TL+PGF ER+ E++A Sbjct: 91 LFEALTVPACHMANTALLALCSIGAFSGLAVEAGAGVCHATPIYAGHSWHKATFRLNVAGSTLSRYFRDLLVAACPDLQLQGLSRKTVTQLKKRCCYVSLDFQGDICDPARHQRAC----FCLGNGCYVRLGSERFRCPEPIFQPSLLGHPEP---GLPTLAFQALQKIPTT--LRTRLANTVVLAGGSTLFPGFVERMNLELEA 286
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT4_LYTPI (Actin, cytoskeletal 4 (Fragment) OS=Lytechinus pictus PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.175e-11 Identity = 36/112 (32.14%), Postives = 67/112 (59.82%), Query Frame = 3 Query: 261 IAGDVIQKLGLIAPDASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 +A D Q++ A +SL + SYELPDG++++ NER++ PE+L++PS +G SG+ + ++ + R D+ N ++SG T++PG A+R+++E+ +L Sbjct: 6 VALDFEQEMQTAASSSSL-----EKSYELPDGQVITTGNERFRAPESLYQPSFLGM---ESSGIHETTYNSIMMCDVD--IRKDLYANTVLSGGSTIFPGIADRMQKEITSL 107 The following BLAST results are available for this feature:
BLAST of CX300743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300743 ID=CX300743; Name=CX300743; organism=Citrus sinensis; type=EST; length=596bpback to top |