CX300743
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT5_XENLA (Actin, cytoplasmic type 5 OS=Xenopus laevis PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 7.244e-36 Identity = 84/205 (40.98%), Postives = 125/205 (60.98%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEED-GARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D + + S + SYELPDG++++I NER++ PEALF+PS +G I + T + + + D R D+ N ++SG T+YPG A+R+++E+ AL Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIH------ETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL 321
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT3_DROME (Actin-57B OS=Drosophila melanogaster GN=Act57B PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 7.244e-36 Identity = 84/205 (40.98%), Postives = 128/205 (62.44%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD-------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D A+ + S K SYELPDG++++I NER++ PE+LF+PS +G G+ + V ++ + + R D+ NI++SG T+YPG A+R+++E+ +L Sbjct: 124 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEK-SYELPDGQVITIGNERFRCPESLFQPSFLGM---ESCGIHETVYNSIMKCDVD--IRKDLYANIVMSGGTTMYPGIADRMQKEITSL 321
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACTC_BIOGL (Actin, cytoplasmic OS=Biomphalaria glabrata PE=2 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 9.460e-36 Identity = 81/204 (39.71%), Postives = 125/204 (61.27%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D + T S + SYELPDG++++I NER++ PEA F+PS +G +G+ + ++ + + R D+ N ++SG T++PG A+R+++E+ AL Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEATFQPSFLGM---EAAGIHETTYNSIMKCDVD--IRKDLYANTVLSGGSTMFPGIADRMQKEITAL 321
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACTB_ORYLA (Actin, cytoplasmic 1 OS=Oryzias latipes GN=actb PE=2 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 9.460e-36 Identity = 82/204 (40.20%), Postives = 125/204 (61.27%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D + + S + SYELPDG++++I NER++ PEALF+PS +G G+ + ++ + + R D+ N ++SG T+YPG A+R+++E+ AL Sbjct: 123 MFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM---ESCGIHETTYNSIMKCDVD--IRKDLYANTVLSGGTTMYPGIADRMQKEITAL 320
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT3_SOLLC (Actin-52 (Fragment) OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 9.460e-36 Identity = 82/204 (40.20%), Postives = 126/204 (61.76%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL + + + +RG SF T+AE +I DV +KL IA D + T S + SYELPDG++++I +ER++ PE LF+PS++G +G+ + ++ + + R D+ NI++SG T++PG A+R+ +E+ AL Sbjct: 105 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIPRLDLAGRDLTDHLMKILTERG-YSFTTTAEREIVRDVKEKLSYIALDYEQEIETAKTSSSVEKSYELPDGQVITIGSERFRCPEVLFQPSMIGM---EAAGIHETTYNSIMKCDVD--IRKDLYGNIVLSGGTTMFPGIADRMSKEITAL 302
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT3_BOMMO (Actin, cytoplasmic A3 OS=Bombyx mori PE=3 SV=3) HSP 1 Score: 149.828 bits (377), Expect = 9.460e-36 Identity = 81/204 (39.71%), Postives = 125/204 (61.27%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D + + S + SYELPDG++++I NER++ PEALF+PS +G +G+ + ++ + + R D+ N ++SG T+YPG A+R+++E+ L Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM---EANGIHETTYNSIMKCDVD--IRKDLYANTVLSGGTTMYPGIADRMQKEITRL 321
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT2_ONCVO (Actin-2 OS=Onchocerca volvulus GN=act-2b PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 9.460e-36 Identity = 81/204 (39.71%), Postives = 126/204 (61.76%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D + + S + SYELPDG+++++ NER++ PEALF+PS +G +G+ + ++ + + R D+ N ++SG T+YPG A+R+++E+ AL Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM---ESAGIHETTYNSIMKC--DIDIRKDLYANNVLSGGSTMYPGIADRMQKEITAL 321
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT2_MOLOC (Actin, muscle-type OS=Molgula oculata PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 9.460e-36 Identity = 82/204 (40.20%), Postives = 126/204 (61.76%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+NVPAM++ + +L+ YASG TG+ + GDGV I GYALP+ I R D GRDL Y + + +RG SF+T+AE +I D+ +KL +A D + + S + SYELPDG++++I NER++ PE +F+PS +G SGV + ++ + + R D+ N ++SG T+YPG A+R+++E+ AL Sbjct: 126 MFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERG-YSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPETMFQPSFIGM---ESSGVHETTYNSIMKC--DIDIRKDLYANNVLSGGTTMYPGIADRMQKEITAL 323
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT2_DROME (Actin-42A OS=Drosophila melanogaster GN=Act42A PE=1 SV=3) HSP 1 Score: 149.828 bits (377), Expect = 9.460e-36 Identity = 81/204 (39.71%), Postives = 125/204 (61.27%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D + + S + SYELPDG++++I NER++ PE+LF+PS +G G+ + ++ + + R D+ N ++SG T+YPG A+R+++E+ AL Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGM---EACGIHETTYNSIMKCDVD--IRKDLYANTVLSGGTTMYPGIADRMQKEITAL 321
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT2_CAEEL (Actin-2 OS=Caenorhabditis elegans GN=act-2 PE=2 SV=3) HSP 1 Score: 149.828 bits (377), Expect = 9.460e-36 Identity = 81/204 (39.71%), Postives = 126/204 (61.76%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D + + S + SYELPDG+++++ NER++ PEALF+PS +G +G+ + ++ + + R D+ N ++SG T+YPG A+R+++E+ AL Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM---ESAGIHETSYNSIMKC--DIDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL 321 The following BLAST results are available for this feature:
BLAST of CX300743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300743 ID=CX300743; Name=CX300743; organism=Citrus sinensis; type=EST; length=596bpback to top |