CX300743
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT_MESVI (Actin OS=Mesostigma viride PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.236e-35 Identity = 83/204 (40.69%), Postives = 123/204 (60.29%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+NVPAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D + T S + SYELPDG++++I NER++ PE LF P +G +G+ + ++ R + R D+ NI++SG T+ PG A+R+ +E+ AL Sbjct: 125 MFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLAYVAIDYEAELATANTSSSIEKSYELPDGQVITIGNERFRCPEVLFNPGYVGM---ESAGIHETTYNSIMRCDVD--IRKDLYGNIVLSGGSTMXPGIADRMSKEITAL 322
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACTC_XENLA (Actin, alpha cardiac muscle 1 OS=Xenopus laevis GN=actc1 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.236e-35 Identity = 81/204 (39.71%), Postives = 126/204 (61.76%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+NVPAM++ + +L+ YASG TG+ + GDGV I GYALP+ I R D GRDL Y + + +RG SF+T+AE +I D+ +KL +A D + + S + SYELPDG++++I NER++ PE LF+PS +G +G+ + ++ + + R D+ N ++SG T+YPG A+R+++E+ AL Sbjct: 125 MFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIQRLDLAGRDLTDYLMKILTERG-YSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGM---ESAGIHETTYNSIMKC--DIDIRKDLYANNVLSGGTTMYPGIADRMQKEITAL 322
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACTC_PISOC (Actin, cytoplasmic OS=Pisaster ochraceus PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.236e-35 Identity = 82/204 (40.20%), Postives = 125/204 (61.27%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D + + S + SYELPDG++++I NER++ PEALF+PS +G +G+ + ++ + + R D+ N ++SG T++PG A+R+++EV AL Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM---ESAGIHETTYNSIMKCDVD--IRKDLYANTVLSGGSTMFPGIADRMQKEVTAL 321
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACTB_SALSA (Actin, cytoplasmic 1 OS=Salmo salar GN=actb PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.236e-35 Identity = 81/204 (39.71%), Postives = 125/204 (61.27%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D + + S + SYELPDG++++I NER++ PEALF+PS +G G+ + ++ + + R D+ N ++SG T+YPG A+R+++E+ +L Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM---ESCGIHETTYNSIMKCDVD--IRKDLYANTVLSGGTTMYPGIADRMQKEITSL 320
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT5_DIPDE (Actin-5 (Fragment) OS=Diphyllobothrium dendriticum GN=ACT5 PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.236e-35 Identity = 81/204 (39.71%), Postives = 126/204 (61.76%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D + + S + SYELPDG++++I NER++ PEALF+PS +G +G+ + ++ + + R D+ N ++SG T+YPG ++R+++E+ AL Sbjct: 119 MFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMSNAASSSALEKSYELPDGQVITIGNERFRCPEALFQPSFLGM---ESAGIHETTYNSIMKCDVD--IRKDLYANTVLSGGSTMYPGISDRMQKEISAL 316
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT5_CHICK (Actin, cytoplasmic type 5 OS=Gallus gallus PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.236e-35 Identity = 83/205 (40.49%), Postives = 125/205 (60.98%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEED-GARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D + + S + SYELPDG++++I NER++ PEA+F+PS +G I + T + + + D R D+ N ++SG T+YPG A+R+++E+ AL Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAIFQPSFLGMESCGIH------ETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL 321
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT4_TOBAC (Actin-66 (Fragment) OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.236e-35 Identity = 83/204 (40.69%), Postives = 126/204 (61.76%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+NVPAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL + + +RG SF TSAE +I DV +KL +A D + + S + SYELPDG++++I +ER++ PE LF+PSL+G +G+ + ++ + + R D+ NI++SG T++PG A+R+ +E+ AL Sbjct: 105 MFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDCLMKILTERG-YSFTTSAEREIVRDVKEKLAYVALDYEQELETAKSSSSVEKSYELPDGQVITIGSERFRCPEVLFQPSLVGM---EAAGIHETTYNSIMKCDVD--IRKDLYGNIVLSGGTTMFPGIADRMSKEITAL 302
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT4_CAEEL (Actin-4 OS=Caenorhabditis elegans GN=act-4 PE=2 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 1.236e-35 Identity = 81/204 (39.71%), Postives = 126/204 (61.76%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D + + S + SYELPDG+++++ NER++ PEALF+PS +G +G+ + ++ + + R D+ N ++SG T+YPG A+R+++E+ AL Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGM---ESAGIHETSYNSIMKC--DIDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL 321
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT4_ARTSX (Actin, clone 403 OS=Artemia sp. PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.236e-35 Identity = 81/204 (39.71%), Postives = 125/204 (61.27%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL Y + + +RG SF T+AE +I D+ +KL +A D + + + + SYELPDG++++I NER++ PEALF+PS +G G+ + ++ + + R D+ N ++SG T+YPG A+R+++E+ AL Sbjct: 124 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG-YSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGM---ESCGIHETTYNSIMKCDVD--IRKDLYANTVLSGGTTMYPGIADRMQKEITAL 321
BLAST of CX300743 vs. ExPASy Swiss-Prot
Match: ACT3_SOLTU (Actin-58 OS=Solanum tuberosum GN=AC58 PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 1.236e-35 Identity = 84/204 (41.18%), Postives = 125/204 (61.27%), Query Frame = 3 Query: 3 MFETYNVPAMFIEVPNILNQYASGTKTGLTVCCGDGVMVTQAISNGYALPNTISRSDFGGRDLNQYFISTMYQRGERSFLTSAEFQIAGDVIQKLGLIAPD------ASLTHSCGKLSYELPDGEILSIQNERYQIPEALFRPSLMGSSYDSISGVADLVQQTLSRVPEEDGARADVAKNIIVSGAPTLYPGFAERLEQEVKAL 596 MFET+N PAM++ + +L+ YASG TG+ + GDGV T I GYALP+ I R D GRDL + + + +RG SF T+AE +I DV +KL IA D S T S + SYELPDG++++I ER++ PE LF+PSL+G +G+ + ++ + + R D+ NI++SG T++PG A+R+ +E+ AL Sbjct: 125 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERG-YSFTTTAEREIVRDVKEKLSYIALDFEQELETSKTSSSVEKSYELPDGQVITIGAERFRCPEVLFQPSLIGM---EAAGIHETTYNSIMKCDVD--IRKDLYGNIVLSGGTTMFPGIADRMSKELTAL 322 The following BLAST results are available for this feature:
BLAST of CX300743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 420
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300743 ID=CX300743; Name=CX300743; organism=Citrus sinensis; type=EST; length=596bpback to top |