CX300727
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300727 vs. ExPASy Swiss-Prot
Match: SYW_SULAC (Tryptophanyl-tRNA synthetase OS=Sulfolobus acidocaldarius GN=trpS PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 3.225e-17 Identity = 45/109 (41.28%), Postives = 64/109 (58.72%), Query Frame = 2 Query: 2 SASDPNSALYVTDSXXXXXXXXXXYAFSGGQESVELHRKLGANLEVDIPVKYLSFFLE-DDAELEHIKKEYGAGGMLTGEVKQRLAQVLTELVERHQVARAAVTDEVTL 325 S+S P +A+Y+TD YAFSGGQ +VELHRK G N ++D+ ++L F E DD + I+++Y +G MLTGE+KQ L L +E H+ R D V + Sbjct: 256 SSSQPETAIYLTDDPKTVERKIMKYAFSGGQATVELHRKYGGNPDIDVAFQWLYMFFEPDDQRIRKIEEDYRSGAMLTGELKQILVDKLNAFLEEHREKREKAKDLVNV 364
BLAST of CX300727 vs. ExPASy Swiss-Prot
Match: SYW_SULTO (Tryptophanyl-tRNA synthetase OS=Sulfolobus tokodaii GN=trpS PE=3 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 9.383e-17 Identity = 41/100 (41.00%), Postives = 65/100 (65.00%), Query Frame = 2 Query: 2 SASDPNSALYVTDSXXXXXXXXXXYAFSGGQESVELHRKLGANLEVDIPVKYLSFFLE-DDAELEHIKKEYGAGGMLTGEVKQRLAQVLTELVERHQVAR 298 S+S P +A+Y+TD YAFSGGQ ++ELHRK G N ++D+ ++L F E DD +++ I+++Y +G +LTGE+KQ L + L + +E H+ R Sbjct: 256 SSSQPETAIYLTDDPKTVERKIMKYAFSGGQPTIELHRKYGGNPDIDVSFQWLYMFFEPDDNKIKKIEEDYRSGALLTGELKQILIEKLNDFLEEHRQKR 355
BLAST of CX300727 vs. ExPASy Swiss-Prot
Match: SYWC_SCHPO (Tryptophanyl-tRNA synthetase, cytoplasmic OS=Schizosaccharomyces pombe GN=wrs1 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.225e-16 Identity = 45/108 (41.67%), Postives = 68/108 (62.96%), Query Frame = 2 Query: 2 SASDPNSALYVTDSXXXXXXXXXXYAFSGGQESVELHRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTGEVKQRLAQVLTELVERHQVARAAVTDEVTL 325 SAS +SA+++TD+ +AFSGG ++E+HR+ G N +VD+ +YLSFFL+DD +L+ + Y AG + TGE+K ++L + V Q AR+ V DE TL Sbjct: 277 SASKDSSAIFMTDTPNKIKNKINRHAFSGGGATIEIHREKGGNPDVDVAYQYLSFFLDDDEKLKQLYNTYKAGTLSTGEMKGECIKLLQQFVSDFQAARSKV-DEATL 383
BLAST of CX300727 vs. ExPASy Swiss-Prot
Match: SYW2_HALSA (Tryptophanyl-tRNA synthetase 2 OS=Halobacterium salinarium GN=trpS2 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.555e-14 Identity = 46/116 (39.66%), Postives = 65/116 (56.03%), Query Frame = 2 Query: 5 ASDPNSALYVTDSXXXXXXXXXXYAFSGGQESVELHRKLGANLEVDIPVKYLSFFLE-DDAELEHIKKEYGAGGMLTGEVKQRLAQVLTELVERHQVARAAVTDEVTLLHAITETE 349 +S ++ +TDS +A++GG+ SVE HR G D+P +YLS F E DDAEL I++EY AG +L+GE+K A +TE + HQ RAA+ D L A T+ Sbjct: 251 SSSAGVSIRLTDSPDTVREKVRTHAYTGGRASVEEHRAKGGVPAEDVPFQYLSAFFEPDDAELARIEREYRAGDLLSGELKDLAADRITEFLAAHQRRRAALGDVTEALDAFRLTD 366 The following BLAST results are available for this feature:
BLAST of CX300727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300727 ID=CX300727; Name=CX300727; organism=Citrus sinensis; type=EST; length=585bpback to top |