CX300727
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300727 vs. ExPASy Swiss-Prot
Match: SYWC_MOUSE (Tryptophanyl-tRNA synthetase, cytoplasmic OS=Mus musculus GN=Wars PE=1 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 2.464e-25 Identity = 60/128 (46.88%), Postives = 83/128 (64.84%), Query Frame = 2 Query: 2 SASDPNSALYVTDSXXXXXXXXXXYAFSGGQESVELHRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTGEVKQRLAQVLTELVERHQVARAAVTDEVTLLHAITETE*SFCKLCDIIDS 385 SASDPNS++++TD+ +AFSGG+++VE HR+ G N EVD+ YL+FFLEDD LE I+K+Y +G MLTGE+K+ L VL L+ HQ R AVT+E T+ +T + SF C D+ Sbjct: 355 SASDPNSSIFLTDTAKQIKSKVNKHAFSGGRDTVEEHRQFGGNCEVDVSFMYLTFFLEDDDRLEQIRKDYTSGAMLTGELKKTLIDVLQPLIAEHQARRKAVTEE-TVKEFMTPRQLSFHFQCFCFDT 481
BLAST of CX300727 vs. ExPASy Swiss-Prot
Match: SYWC_RAT (Tryptophanyl-tRNA synthetase, cytoplasmic OS=Rattus norvegicus GN=Wars PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 9.362e-25 Identity = 59/128 (46.09%), Postives = 82/128 (64.06%), Query Frame = 2 Query: 2 SASDPNSALYVTDSXXXXXXXXXXYAFSGGQESVELHRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTGEVKQRLAQVLTELVERHQVARAAVTDEVTLLHAITETE*SFCKLCDIIDS 385 SASDPNS++++TD+ +AFSGG+++VE HR+ G N EVD+ YL+FFLEDD LE I+K+Y +G MLTGE+K+ L VL L+ HQ R AVT+E T+ + + SF C D+ Sbjct: 355 SASDPNSSIFLTDTAKQIKSKVNKHAFSGGRDTVEEHRQFGGNCEVDVSFMYLTFFLEDDDSLEQIRKDYTSGAMLTGELKKTLIDVLQPLIAEHQARRKAVTEE-TVKEFMAPRQLSFHFQCFCFDT 481
BLAST of CX300727 vs. ExPASy Swiss-Prot
Match: SYWC_RABIT (Tryptophanyl-tRNA synthetase, cytoplasmic OS=Oryctolagus cuniculus GN=WARS PE=2 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 9.362e-25 Identity = 53/106 (50.00%), Postives = 74/106 (69.81%), Query Frame = 2 Query: 2 SASDPNSALYVTDSXXXXXXXXXXYAFSGGQESVELHRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTGEVKQRLAQVLTELVERHQVARAAVTDEV 319 SASDPNS++++TD+ +AFSGG++++E HR+ G N +VD+ YL+FFLEDD +LE I+K+Y +G MLTGE+K+ L VL LV HQ R VTDE+ Sbjct: 355 SASDPNSSIFLTDTAKQIKTKVNKHAFSGGRDTIEEHRQFGGNCDVDVSFMYLTFFLEDDDKLEQIRKDYSSGAMLTGELKKELIDVLQPLVAEHQARRKEVTDEM 460
BLAST of CX300727 vs. ExPASy Swiss-Prot
Match: SYWC_PONAB (Tryptophanyl-tRNA synthetase, cytoplasmic OS=Pongo abelii GN=WARS PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 9.362e-25 Identity = 52/106 (49.06%), Postives = 75/106 (70.75%), Query Frame = 2 Query: 2 SASDPNSALYVTDSXXXXXXXXXXYAFSGGQESVELHRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTGEVKQRLAQVLTELVERHQVARAAVTDEV 319 SASDPNS++++TD+ +AFSGG++++E HR+ G N +VD+ YL+FFLEDD +LE I+K+Y +G MLTGE+K+ L +VL L+ HQ R VTDE+ Sbjct: 352 SASDPNSSIFLTDTAKQIKTKVNKHAFSGGRDTIEEHRQFGGNCDVDVSFMYLTFFLEDDDKLEQIRKDYTSGAMLTGELKKALIEVLQPLIAEHQARRKEVTDEI 457
BLAST of CX300727 vs. ExPASy Swiss-Prot
Match: SYWC_HUMAN (Tryptophanyl-tRNA synthetase, cytoplasmic OS=Homo sapiens GN=WARS PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 9.362e-25 Identity = 52/106 (49.06%), Postives = 75/106 (70.75%), Query Frame = 2 Query: 2 SASDPNSALYVTDSXXXXXXXXXXYAFSGGQESVELHRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTGEVKQRLAQVLTELVERHQVARAAVTDEV 319 SASDPNS++++TD+ +AFSGG++++E HR+ G N +VD+ YL+FFLEDD +LE I+K+Y +G MLTGE+K+ L +VL L+ HQ R VTDE+ Sbjct: 351 SASDPNSSIFLTDTAKQIKTKVNKHAFSGGRDTIEEHRQFGGNCDVDVSFMYLTFFLEDDDKLEQIRKDYTSGAMLTGELKKALIEVLQPLIAEHQARRKEVTDEI 456
BLAST of CX300727 vs. ExPASy Swiss-Prot
Match: SYWC_BOVIN (Tryptophanyl-tRNA synthetase, cytoplasmic OS=Bos taurus GN=WARS PE=1 SV=3) HSP 1 Score: 112.849 bits (281), Expect = 1.223e-24 Identity = 52/106 (49.06%), Postives = 75/106 (70.75%), Query Frame = 2 Query: 2 SASDPNSALYVTDSXXXXXXXXXXYAFSGGQESVELHRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTGEVKQRLAQVLTELVERHQVARAAVTDEV 319 SASDPNS++++TD+ +AFSGG+++VE HR+ G N +VD+ YL+FFLEDD +LE I+++Y +G MLTGE+K+ L +VL L+ HQ R VTDE+ Sbjct: 356 SASDPNSSIFLTDTAKQIKTKVNKHAFSGGRDTVEEHRQFGGNCDVDVSFMYLTFFLEDDDKLEQIRRDYTSGAMLTGELKKELIEVLQPLIAEHQARRKEVTDEI 461
BLAST of CX300727 vs. ExPASy Swiss-Prot
Match: SYWC_DICDI (Tryptophanyl-tRNA synthetase, cytoplasmic OS=Dictyostelium discoideum GN=trpS PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.943e-20 Identity = 49/106 (46.23%), Postives = 69/106 (65.09%), Query Frame = 2 Query: 2 SASDPNSALYVTDSXXXXXXXXXXYAFSGGQESVELHRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTGEVKQRLAQVLTELVERHQVARAAVTDEV 319 SASD NSA+Y++D+ +AFSGG + E K GA+L VDI +YL+F LEDD +L+ I Y G M+TGE+KQ L ++ +++ RH+ ARA +TDEV Sbjct: 283 SASDTNSAVYLSDTPDQVKDKIKKHAFSGGGATKEEQEKNGADLSVDITYEYLTFMLEDDEQLKDIAHRYSTGKMMTGEIKQILIDLMNKIIIRHKEARAKITDEV 388
BLAST of CX300727 vs. ExPASy Swiss-Prot
Match: SYW_ENCCU (Tryptophanyl-tRNA synthetase OS=Encephalitozoon cuniculi GN=ECU11_0530 PE=1 SV=2) HSP 1 Score: 93.9745 bits (232), Expect = 5.877e-19 Identity = 43/105 (40.95%), Postives = 70/105 (66.67%), Query Frame = 2 Query: 2 SASDPNSALYVTDSXXXXXXXXXXYAFSGGQESVELHRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTGEVKQRLAQVLTELVERHQVARAAVTDE 316 SASDPNS++Y+ D+ YA+SGG++++E HR+ G +++VD+P +YL +FL+DD ELE + Y G + + E+K++ V+ E V R+Q +R VTD+ Sbjct: 270 SASDPNSSIYLDDAQDTIRKKIIAYAYSGGRKTLEEHREKGGDIDVDVPFEYLKYFLDDDQELEKYRSGYIKGEITSKEMKEKCVVVIQEFVSRYQESRKRVTDD 374
BLAST of CX300727 vs. ExPASy Swiss-Prot
Match: SYW_SULSO (Tryptophanyl-tRNA synthetase OS=Sulfolobus solfataricus GN=trpS PE=3 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 8.487e-18 Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = 2 Query: 2 SASDPNSALYVTDSXXXXXXXXXXYAFSGGQESVELHRKLGANLEVDIPVKYL-SFFLEDDAELEHIKKEYGAGGMLTGEVKQRLAQVLTELVERHQVAR 298 S+S+P +A+Y+ D YAFSGGQ ++ELHRK G N E+D+P ++L FF EDD ++ I++EY +G MLTGE+KQ L L +E H+ R Sbjct: 255 SSSNPETAIYLVDDPKTVERKIMKYAFSGGQPTIELHRKYGGNPEIDVPFQWLYYFFEEDDNRIKEIEEEYRSGKMLTGELKQILIDKLNNFLEEHRRRR 354
BLAST of CX300727 vs. ExPASy Swiss-Prot
Match: SYWC_YEAST (Tryptophanyl-tRNA synthetase, cytoplasmic OS=Saccharomyces cerevisiae GN=WRS1 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.891e-17 Identity = 45/105 (42.86%), Postives = 66/105 (62.86%), Query Frame = 2 Query: 2 SASDPNSALYVTDSXXXXXXXXXXYAFSGGQESVELHRKLGANLEVDIPVKYLSFFLEDDAELEHIKKEYGAGGMLTGEVKQRLAQVLTELVERHQVARAAVTDE 316 SASD +A+++TD+ YAFSGGQ S +LHR+LG N +VD+ +YLSFF +DD L+ +Y +G +L+GE+K+ + L E V+ Q RA V +E Sbjct: 297 SASDDTTAIFMTDTPKQIQKKINKYAFSGGQVSADLHRELGGNPDVDVAYQYLSFFKDDDVFLKECYDKYKSGELLSGEMKKLCIETLQEFVKAFQERRAQVDEE 401 The following BLAST results are available for this feature:
BLAST of CX300727 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300727 ID=CX300727; Name=CX300727; organism=Citrus sinensis; type=EST; length=585bpback to top |