EY702112
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY702112 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 1.350e-70 Identity = 146/247 (59.11%), Postives = 173/247 (70.04%), Query Frame = 3 Query: 111 PLSFNGSGAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVAHITKNFMCLPNIKGPLILGIWGS*RTGKSFPWELVFAKMGITPTMMSGRKIGKVPRLEKPPNVISEMVPAGNLTFSGKGRMGCPPIDDLEAGPGRLVGPPE*QVTFNWVYA*SCTLVN 851 P + NGS ++ SVPSS+F G+SLKKV+SR SKV S S +I A VDE+KQT +DRWKGLA+D SDDQQDITRGKG VDSLFQAP G+GTH+A+MSSY+YIS GLR YN DN +DG YIAPAFMDKLV HITKNFM LPN+K PLILGIWG GKSF ELVFAKM I+P MMS ++ E + A ++ KG+M I+DL+AG GRL G + V V A TL+N Sbjct: 15 PPNLNGSSSSASVPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGELESGNAGEPAKLIRQRYREAADII--RKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNA---TLMN 256
BLAST of EY702112 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 1.764e-70 Identity = 150/249 (60.24%), Postives = 177/249 (71.08%), Query Frame = 3 Query: 111 PLSFNGSGAATS-VPSSSFFGTSLKKVSSRIPPSKVPSASFKITA-EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVAHITKNFMCLPNIKGPLILGIWGS*RTGKSFPWELVFAKMGITPTMMSGRKIGKVPRLEKPPNVISEMVPAGNLTFSGKGRMGCPPIDDLEAGPGRLVGPPE*QVTFNWVYA*SCTLVN 851 PLS NGSGA S VPS++FFG+SLKK +++ P K S +FKI A E+ E++QT +D+WKGLAYD SDDQQDITRGKG VD+LFQAPM +GTHYAVMSSYDYISQGLR YNLDN +DG YIAPAFMDKLV HITKNF+ LPNIK PLILGIWG GKSF ELVFAKMGI P MMS ++ E + A ++ KG+M C I+DL+AG GR+ G + V V A TL+N Sbjct: 15 PLSLNGSGARASLVPSTAFFGSSLKKSAAKFP--KASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII--KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNA---TLMN 256
BLAST of EY702112 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 1.764e-70 Identity = 150/249 (60.24%), Postives = 177/249 (71.08%), Query Frame = 3 Query: 111 PLSFNGSGAATS-VPSSSFFGTSLKKVSSRIPPSKVPSASFKITA-EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVAHITKNFMCLPNIKGPLILGIWGS*RTGKSFPWELVFAKMGITPTMMSGRKIGKVPRLEKPPNVISEMVPAGNLTFSGKGRMGCPPIDDLEAGPGRLVGPPE*QVTFNWVYA*SCTLVN 851 PLS NGSGA S VPS++FFG+SLKK +++ P K S +FKI A E+ E++QT +D+WKGLAYD SDDQQDITRGKG VD+LFQAPM +GTHYAVMSSYDYISQGLR YNLDN +DG YIAPAFMDKLV HITKNF+ LPNIK PLILGIWG GKSF ELVFAKMGI P MMS ++ E + A ++ KG+M C I+DL+AG GR+ G + V V A TL+N Sbjct: 15 PLSLNGSGARASLVPSTAFFGSSLKKSAAKFP--KASSGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVMSSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII--KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNA---TLMN 256
BLAST of EY702112 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 259.61 bits (662), Expect = 1.651e-68 Identity = 150/250 (60.00%), Postives = 173/250 (69.20%), Query Frame = 3 Query: 114 LSFNGSGAATSVPSSSFFGTSLKK-VSSRIPPSKVPSASFKITA---EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVAHITKNFMCLPNIKGPLILGIWGS*RTGKSFPWELVFAKMGITPTMMSGRKIGKVPRLEKPPNVISEMVPAGNLTFSGKGRMGCPPIDDLEAGPGRLVGPPE*QVTFNWVYA*SCTLVN 851 L+ NGSGA S P+S+FFGTSLKK V+SR+P SKV + SFKI A E++E++QT +DRWKGLAYD SDDQQDITRGKG VD LFQAPM GTHYAVMSSY+Y+S GLR LDN DG YIAPAF+DKLV HITKNFM LPNIK PLILGIWG GKSF ELVFAKMGI P MMS ++ E + A +L KG+M I+DL+AG GRL G + V V A TL+N Sbjct: 16 LNLNGSGAGASAPTSAFFGTSLKKAVASRVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMSSYEYLSTGLR--QLDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLI--AKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNA---TLMN 258
BLAST of EY702112 vs. ExPASy Swiss-Prot
Match: RCA_PHAVU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus vulgaris GN=RCA1 PE=2 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 2.156e-68 Identity = 148/250 (59.20%), Postives = 171/250 (68.40%), Query Frame = 3 Query: 114 LSFNGSGAATSVPSSSFFGTSLKKV-SSRIPPSKVPSASFKITA---EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVAHITKNFMCLPNIKGPLILGIWGS*RTGKSFPWELVFAKMGITPTMMSGRKIGKVPRLEKPPNVISEMVPAGNLTFSGKGRMGCPPIDDLEAGPGRLVGPPE*QVTFNWVYA*SCTLVN 851 L+ NGSG S PSS+FFGTSLKKV SSR+P SK+ S SFKI A E++E +QT+ DRW+GLAYD SDDQQDITRGKG VDSLFQAPM GTHYAV+SS+ Y+S GLR YN DN DG YIAPAF+DKLV HI KNFM LPNIK PLILG+WG GKSF ELVFAKMGI P MMS ++ E + A +L KG+M I+DL+AG GRL G + V V A TL+N Sbjct: 16 LNLNGSGGGASGPSSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGLAYDVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKLVVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREASDLI--KKGKMCVLFINDLDAGAGRLGGTTQYTVNNQMVNA---TLMN 260
BLAST of EY702112 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 253.062 bits (645), Expect = 1.545e-66 Identity = 148/262 (56.49%), Postives = 174/262 (66.41%), Query Frame = 3 Query: 96 MAAAV---------PLSFNGSGA-ATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVAHITKNFMCLPNIKGPLILGIWGS*RTGKSFPWELVFAKMGITPTMMSGRKIGKVPRLEKPPNVISEMVPAGNLTFSGKGRMGCPPIDDLEAGPGRLVGPPE*QVTFNWVYA*SCTLVN 851 MAAAV PLS NGSG+ A S P+S+F G + VS +K + SFK+ A V E+KQT DRW+GLAYD SDDQQDITRGKG VDS+FQAPMGTGTH+AV+SSY+Y+SQGLR YNLDN +DG YIAPAFMDKLV HITKNF+ LPNIK PLILGIWG GKSF ELV AKMGI P MMS ++ E + A +L KG+M C I+DL+AG GR+ G + V V A TL+N Sbjct: 1 MAAAVSTVGAINRAPLSLNGSGSGAVSAPASTFLGKKVVTVSRFAQSNKKSNGSFKVLA-VKEDKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYEYVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADLI--KKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNA---TLMN 256
BLAST of EY702112 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 3.442e-66 Identity = 144/251 (57.37%), Postives = 168/251 (66.93%), Query Frame = 3 Query: 111 PLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITAE---VDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVAHITKNFMCLPNIKGPLILGIWGS*RTGKSFPWELVFAKMGITPTMMSGRKIGKVPRLEKPPNVISEMVPAGNLTFSGKGRMGCPPIDDLEAGPGRLVGPPE*QVTFNWVYA*SCTLVN 851 PLS N S A TSVPS++FFG +LKKV + + KV + S +I AE VD KQT DRWKGL D SDDQQDITRGKG VDSLFQAP GTGTH+AV+ SY+Y+SQGLR YNLDN +DG YIAPAFMDKLV HITKNF+ LPNIK PLILGIWG GKSF ELVF KMGI P MMS ++ + +P +I + KG M C I+DL+AG GR+ G + V V A TL+N Sbjct: 15 PLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNKSLRIVAEQIDVDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGINPIMMSAGEL-ESGNAGEPAKLIRQRYREA-AEIIRKGNMCCLFINDLDAGAGRMGGTTQYTVNNQMVNA---TLMN 260
BLAST of EY702112 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 1.107e-64 Identity = 140/255 (54.90%), Postives = 168/255 (65.88%), Query Frame = 3 Query: 99 AAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITAE---VDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVAHITKNFMCLPNIKGPLILGIWGS*RTGKSFPWELVFAKMGITPTMMSGRKIGKVPRLEKPPNVISEMVPAGNLTFSGKGRMGCPPIDDLEAGPGRLVGPPE*QVTFNWVYA*SCTLVN 851 A PLS N S A TSVPS++FFG +LKKV + + KV + S +I AE D KQT DRWKGL D SDDQQDI RGKG VDSLFQAP GTGTH+AV+ SY+Y+SQGLR YN+DNT+DG YIAP+FMDKLV HITKNF+ LPNIK PLILG+WG GKSF ELVF KMGI P MMS ++ + +P +I + KG + C I+DL+AG GR+ G + V V A TL+N Sbjct: 11 ANKAPLSLNNSVAGTSVPSTAFFGKTLKKVYGKGVSSPKVTNRSLRIAAEEKDADPKKQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGEL-ESGNAGEPAKLIRQRYREA-AEIIRKGNICCLFINDLDAGAGRMGGTTQYTVNNQMVNA---TLMN 260
BLAST of EY702112 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 246.514 bits (628), Expect = 1.446e-64 Identity = 138/254 (54.33%), Postives = 167/254 (65.75%), Query Frame = 3 Query: 90 SLMAAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITAEVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVAHITKNFMCLPNIKGPLILGIWGS*RTGKSFPWELVFAKMGITPTMMSGRKIGKVPRLEKPPNVISEMVPAGNLTFSGKGRMGCPPIDDLEAGPGRLVGPPE*QVTFNWVYA*SCTLVN 851 S + A + N S VP+S+F G+ LK VSSR SK+ + +FKI AE DE KQT++D+W+GLA+D SDDQQDITRGKG D LFQAPMGTGTH AV+SSY+YIS GLR Y+ DN +DG YIAPAFMDKL HI KNF+ LPNIK PLILG+WG GKSF ELVFAKMGI P MMS ++ E + A ++ KG+M C I+DL+AG GRL G + V V A TL+N Sbjct: 6 STIGAVNRTTLNNSNYGGLVPNSAFLGSRLK-VSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADII--KKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNA---TLMN 253
BLAST of EY702112 vs. ExPASy Swiss-Prot
Match: RCA_SOLPN (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 9.374e-64 Identity = 139/253 (54.94%), Postives = 171/253 (67.59%), Query Frame = 3 Query: 99 AAAVPLSFNGSGAATSVPSSSFFGTSLKKVSSR-IPPSKVPSASFKITA-EVDENKQTKQDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTIDGLYIAPAFMDKLVAHITKNFMCLPNIKGPLILGIWGS*RTGKSFPWELVFAKMGITPTMMSGRKIGKVPRLEKPPNVISEMVPAGNLTFSGKGRMGCPPIDDLEAGPGRLVGPPE*QVTFNWVYA*SCTLVN 851 A+ PLS N S A TSVPS++FFG SLKKV ++ + KV + + ++ A EVDE TK+DRWKGL + SDDQQDI RGKG VDSLFQAP GTGTH+A+M+SY+Y+SQ L+TY LDN +DG YIAPAFMDKLV HITKNF+ LPNIK PLILG+WG GKSF ELVF KMGI P MMS ++ + +P +I + KG M C I+DL+AG GR+ G + V V A TL+N Sbjct: 11 ASKAPLSLNNSVAGTSVPSTAFFGKSLKKVYAKGVSSPKVSNRNLRVVAQEVDE---TKEDRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGEL-ESGNAGEPAKLIRQRYREA-AEIIRKGNMCCLFINDLDAGAGRMGGTTQYTVNNQMVNA---TLMN 255 The following BLAST results are available for this feature:
BLAST of EY702112 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY702112 ID=EY702112; Name=EY702112; organism=Citrus sinensis; type=EST; length=871bpback to top |