CX069906
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_NICSY (Putative membrane protein ycf1 OS=Nicotiana sylvestris GN=ycf1-A PE=3 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.979e-46 Identity = 127/295 (43.05%), Postives = 169/295 (57.29%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGKIK-------------------------ELSKIN------LREIEKLRET--QKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRIISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPIL 786 PFGSP+KR SFFEPIF FI L+ FK GKIK ELSK+N L+EI++ ET +K+S++S Q+I+E +I S +W S E KMKDLT+RTS I+NQI +ITKEKKK +T E +IS NK T ++K + K+I++ILK+RN RLI K + FLK I+++Y ++F+S + IPRINT+ F EST K+I+K I NNE N E+IN K ISTI+ +L SQAYVFYKL Q ++ Sbjct: 959 PFGSPRKRPSFFEPIFKELEKKIGKFKKKYFITLKVFK-GKIKLFRRISKETKKWLIKSSLFIKKMKKELSKVNPIVLFRLKEIDESNETKKEKDSLMSNQIINESFSQIESGNWPNSSLIESKMKDLTDRTSTIKNQIERITKEKKK--VTPEIDISPNK-TNNIKKFESPKKIFQILKRRNTRLIWKFHYFLKLFIQRLYIDLFLSIINIPRINTQLFLESTN---KLIDKYISNNEINQEKINNQKKIHFISTIKKSLYNISKKNSHIFFDLSYL--SQAYVFYKLSQPQVI 1244
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_DRIGR (Putative membrane protein ycf1 OS=Drimys granadensis GN=ycf1 PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 2.188e-45 Identity = 127/294 (43.20%), Postives = 166/294 (56.46%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGK------------------------IKELSKIN------LREIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNE--ANPERINKTNKNRI--ISTIQ--XXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQ 774 PFGSP+K SFFEPIF F VL+ KE +KEL+K+N LR+ + ET K+SIIS ++ HE +I+I M WT S TEKKMKDL + T+ I+NQI +I K+KKK LT + NI NK ++ + + K IW+ KKR+ARLIRKS F+K+ IE IY +IF+ T+ IPRIN + F EST+ +I+K I+NNE N E I++TN+N+I ISTIQ C+ LSF SQAYVFYKL Q Sbjct: 903 PFGSPRKEPSFFEPIFKELEKKMRKVQKKYFRVLKFLKERTKWCLKVSKEKIRWVIKIVLFIKRIMKELAKVNSILLFGLRKGYQPSETGKDSIISNKITHESTIQIRPMGWTNYSLTEKKMKDLADSTTTIKNQIERIKKDKKKIFLTTDINIIPNKTSFDDERSESQKHIWQRSKKRSARLIRKSQYFIKYFIEIIYMDIFLCTINIPRINAQLFLESTK---NLIDKYIYNNETNTNKEGIDETNQNKIQFISTIQKSLSILNIRNNNSHIYCD-LSF-LSQAYVFYKLSQ 1191
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_CHLSC (Putative membrane protein ycf1 OS=Chloranthus spicatus GN=ycf1-A PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.733e-45 Identity = 121/291 (41.58%), Postives = 159/291 (54.64%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGK---------------------IKELSKIN------LREIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRI--ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPIL 786 PFGSP+K+ SFFEPI F+VLR FKE +KE K+N L ++ + E K+ IIS ++ HE I+I SMDWT S TE+KMKDL NR + IRNQI KITKEKKK LT + NIS N+ K + K IW+I K+R+A+LIR +K IE+IY +IF+ T+ IP IN + EST+ KII+K I+N+E N E I++TN N I ISTI+ S SQAYVFYKL ++ ++ Sbjct: 943 PFGSPRKQPSFFEPISKELEKIIRKVKRKFFLVLRVFKERTKWFLKLSKEKAKWVVLFIKRILKEFEKVNPISLFGLMKVHEPSEKGKDCIISNKIAHESPIQIRSMDWTNYSLTEQKMKDLANRITTIRNQIEKITKEKKKRFLTPDINISPNEIGCDDKRSESQKHIWQISKRRSAKLIRNWPYLMKSFIERIYIDIFLCTINIPIINAQLLLESTK---KIIDKYIYNDETNQEGIDETNLNIIHFISTIKKSLSNTNISNKNLQIYCDLSSLSQAYVFYKLSKIKVI 1230
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_BARVE (Putative membrane protein ycf1 OS=Barbarea verna GN=ycf1-A PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 8.316e-45 Identity = 124/293 (42.32%), Postives = 163/293 (55.63%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKE------------------------GKIKELSKINL------REIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRI--ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPI 783 PFGS QK+ SFFEPI SF+VLR FKE GKIK+LSK NL REI +L ET+K+SI+S QMIHE S++ SM+WT S +E K++++ +R IRNQI +I+KEK Q S NK Y KI++PSK+IW+ K++N RLIRKS F+KF IE++ IF+ + IPRI T+ F EST+ I++K I+ E N E+ K KN I ISTI+ C+L SQAYVFYKL Q+ + Sbjct: 896 PFGSAQKKPSFFEPISKELKKRINKFKTKSFLVLRIFKERATIFIKVTKEIKNRILKNFLFIKGKIKDLSKRNLIPLFGPREIYELNETKKDSIMSNQMIHELSVQKKSMEWTNSSLSENKIQNVIDRIKTIRNQIKEISKEK------QNLTNSCNKLRYDSKIIEPSKKIWQTFKRKNTRLIRKSIFFIKFCIEQLSIAIFLGIINIPRITTQLFFESTK---TILDKYIYKAEENGEK-KKKKKNTIYFISTIK-NLISNKKKISYDLCSL-----SQAYVFYKLSQIQV 1172
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_NASOF (Putative membrane protein ycf1 OS=Nasturtium officinale GN=ycf1-A PE=3 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.418e-44 Identity = 124/292 (42.47%), Postives = 159/292 (54.45%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKE------------------------GKIKELSKINL------REIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERI-NKTNKNRIISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPI 783 PFGS QK+ SFFEPI SF+VLR FKE GKIK+LSK NL REI +L ETQK+SI+S QMIHE S++ SM+WT S +E K+K+L NR I NQI +I+KEK Q S NK Y K ++ SK+IW+ K++N RLIRKS F+KF IE++ IF+ + IPRI T+ F EST+ I++K I+ E N E+I NK ISTI+ NL S SQAYVFYK+ Q+ + Sbjct: 902 PFGSAQKKPSFFEPISKQLTKRIKKFKTKSFLVLRIFKERATIFLKVAKEIKNWFLKNFLFIKGKIKDLSKRNLISLFGPREIYELNETQKDSIMSNQMIHELSVQNKSMEWTNSSLSENKIKNLINRIKTISNQIEEISKEK------QNLTNSCNKLRYDSKKMESSKKIWQTFKRKNTRLIRKSIFFVKFCIEQLSIAIFLGIINIPRITTQLFFESTK---TILDKYIYKTEENGEKINNKKTTIYFISTIKNLISNSNKKKISY--NLCSL--SQAYVFYKISQIKV 1180
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_POPTR (Putative membrane protein ycf1 OS=Populus trichocarpa GN=ycf1-A PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.420e-44 Identity = 128/302 (42.38%), Postives = 160/302 (52.98%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGK--------------------IKEL------SKIN------LREIEKLRET--QKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVK--ILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNI--HNNEANPERINKTNKNRIISTIQXXXXXXXXXXXXXXCNLL--SFSQSQAYVFYKLLQVPIL 786 PFGSP+K S FEPIF F+ L KE + +KE+ SK N RE+ +L ET +KNS I+ + IH+ S I SMDW S TEKKMKDL RT IRNQI KITKEKKK L E NIS NK +Y+ K L SK I +ILK+ NA+L+RKSY F+K IEKIY +I ++ + IPRIN + F ES R K+I K I +N + N +RI KTN+N +I I + S SQAYVFYKL QV ++ Sbjct: 911 PFGSPRKELSLFEPIFKKLKKKIRKLKKNGFLTLTILKEKRKLFLHLPKETKNWFIKGILFLKEIINKFSKSKRNPILLFGFREVYELNETKNEKNSPINNRTIHKFSTSIRSMDWINYSLTEKKMKDLNARTKTIRNQIEKITKEKKKRFLISERNISPNKLSYNAKRLKLKSSKNILQILKRNNAQLVRKSYFFIKILIEKIYIDILLAIINIPRINVQFFLESPR---KMINKYIYMYNKKENHKRIEKTNQNTLIHFISIIKKALNYSNFNKNSKIFYNITSLSQAYVFYKLSQVQVI 1209
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_ATRBE (Putative membrane protein ycf1 OS=Atropa belladonna GN=ycf1-A PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.420e-44 Identity = 123/295 (41.69%), Postives = 165/295 (55.93%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGKIK-------------------------ELSKINL------REIEKLRET--QKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRIISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPIL 786 PFGSP+ R SFFEPIF FI L+ K GK K ELSKI L +EI + ET +K+S+IS Q+I+E +I S++W S E KMKDLT+RTS I+NQI +ITKEKKK +T E +IS NK T ++K + +K I++IL++RN RLI K + F+K I+++Y N+F+S + IPRINT+ F EST K+I+K I NNE N E+IN K IST++ +L SQAYVFYKL Q ++ Sbjct: 936 PFGSPRSRPSFFEPIFKELEKKNGKLKKKYFITLKVLK-GKTKLFRRISKETKKWLIKSILFLKKIRKELSKIKLIVLFRFKEISESNETKKEKDSLISNQIINESFSQIESVNWPNSSLIETKMKDLTDRTSTIKNQIERITKEKKK--VTPEIDISRNK-TNNIKKFESTKNIFQILQRRNTRLIWKFHYFIKLFIQRLYINLFLSIINIPRINTQLFLESTN---KLIDKYISNNEINQEKINNKKKIHFISTLKKSLYNISNKNSHIFFDLSYL--SQAYVFYKLSQTQVI 1221
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_COFAR (Putative membrane protein ycf1 OS=Coffea arabica GN=ycf1 PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 5.390e-44 Identity = 127/295 (43.05%), Postives = 166/295 (56.27%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFI-----------VLRDFKEGK-------------IKELSKIN------LREIEKLRET--QKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRI--ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPI 783 PFGSP+K+ SFFEP F+ +LR KE K IKELSK+N RE+ + ET +K+SIIS Q+IHE +I+S +WT S TEKK KD+++RTS IRNQI +I KEKKK + T IS NK ++ K L+ K IW+ILKKRNARL K F+K +E+IY +IF+ + I R+NT+ F ES + KI++K+I N+AN ERINK N+N I ISTI+ LS+ SQAYVFYKL Q + Sbjct: 947 PFGSPRKQSSFFEPAVKELETKIIKFKRAYFLALKVLKRKTKLLLRVSKETKKWIIESFLFLKRLIKELSKLNPIILFRFREVYESNETKNEKDSIISNQIIHESFSKINSPNWTNSSLTEKKKKDMSHRTSTIRNQIERIIKEKKKITPTPRIYISPNKRNWNTKRLELPKNIWQILKKRNARLFSKFNSFIKIFVERIYIDIFLFIINITRLNTQLFIESIK---KIMDKSI--NKANKERINKKNQNTIYFISTIKKSIDTINNKTNSYIFCDLSY-LSQAYVFYKLSQTKV 1235
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_POPAL (Putative membrane protein ycf1 OS=Populus alba GN=ycf1 PE=3 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 7.040e-44 Identity = 128/302 (42.38%), Postives = 160/302 (52.98%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGK--------------------IKEL------SKIN------LREIEKLRET--QKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKIL--DPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNI--HNNEANPERINKTNKNRIISTIQXXXXXXXXXXXXXXCNLL--SFSQSQAYVFYKLLQVPIL 786 PFGSP+K S FEPIF F+ L KE + +KE+ SK N RE+ +L ET +KNS I+ + IH+ S I SMDW S TEKKMKDL RT IRNQI KITKEKKK L E NIS NK +Y+ K L SK I +ILK+ NA+L+RKSY F+K IEKIY +I ++ + IPRIN + F ES R K+I K I +N + N +RI+KTN+N I I + S SQAYVFYKL QV ++ Sbjct: 909 PFGSPRKELSLFEPIFKKLKKKIRKLKKNGFLTLTILKEKRKLFLHLPKETKNWFIKGILFLKEIINKFSKSKRNPILLFGFREVYELNETKNEKNSPINNRTIHKFSTSIRSMDWINYSLTEKKMKDLNARTKTIRNQIEKITKEKKKRFLISERNISPNKLSYNAKRLKFKSSKNILQILKRNNAQLVRKSYFFIKILIEKIYIDILLAIINIPRINVQFFLESPR---KMINKYIYMYNKKENNKRIDKTNQNTPIHFISIIKKALNYSNFNKNSKIFYNITSLSQAYVFYKLSQVQVI 1207
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_SOLBU (Putative membrane protein ycf1 OS=Solanum bulbocastanum GN=ycf1 PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.563e-43 Identity = 125/299 (41.81%), Postives = 166/299 (55.52%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGKIK-------------------------ELSKIN------LREIEKLRETQKNS--IISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRI----ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPIL 786 PFGSP+KR SFFEPIF F+ L+ K GK K ELSK+N +EI + ET+K +IS Q+I+E +I S +W S EKKMKDLT+RTS I+NQI +ITKEKKK +T E +I+ NK T ++K L+ K+ ++ILK RN R+I K + FLK I+++Y ++F+S + IPRI T+ F EST K+IEK I NNE N E+I TNK +I ISTI+ C+L SQAYVFYKL Q ++ Sbjct: 947 PFGSPRKRPSFFEPIFKELEKKIGKFKKKYFLTLKILK-GKTKLFRSVSKETKKWFIQSIGFLKKIKKELSKVNPIVLFRFKEISESNETKKEKDYLISNQIINESFSQIESGNWPNSSLIEKKMKDLTDRTSTIKNQIERITKEKKK--VTPEIDINPNK-TNNIKKLESPKKFFQILKSRNTRVIWKFHYFLKLFIQRLYIDLFLSIINIPRITTQLFLESTN---KLIEKFISNNEINQEKI--TNKKKIHFIFISTIKKSLYNISKKNSHIFCDLSYL--SQAYVFYKLSQTQVI 1234 The following BLAST results are available for this feature:
BLAST of CX069906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069906 ID=CX069906; Name=CX069906; organism=Citrus sinensis; type=EST; length=786bpback to top |