CX069906
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_CITSI (Putative membrane protein ycf1 OS=Citrus sinensis GN=ycf1-A PE=3 SV=1) HSP 1 Score: 451.055 bits (1159), Expect = 3.299e-126 Identity = 235/262 (89.69%), Postives = 235/262 (89.69%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGKIKELSKINLREIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRIISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPIL 786 PFGSPQKRRSFFEPIF SFIVLRDFKEGKIKELSKINLREIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRIISTIQ CNLLSFSQSQAYVFYKLLQVPIL Sbjct: 911 PFGSPQKRRSFFEPIFKELKKKIRKLKTKSFIVLRDFKEGKIKELSKINLREIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRIISTIQKLISKTSNKNSKISCNLLSFSQSQAYVFYKLLQVPIL 1172
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_GOSBA (Putative membrane protein ycf1 OS=Gossypium barbadense GN=ycf1 PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.478e-59 Identity = 147/301 (48.84%), Postives = 176/301 (58.47%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKE------------------------GKIKELSKIN------LREIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKIT--KEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKN--RIISTIQ-----XXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPIL 786 PFGSP+KRRSFFEPIF FI L KE G IKELSKIN LRE +L ET+K+SIIS +MIH+ S++I SM WT S TEKK+KDLT RT+ I+NQI KI K+KK LTQE N SSNK +Y KIL+ SK+ W+I+K+RN RLIRK Y F+ F IEKIY +I + + IPR NT+ F EST+ K+IE IHNNEAN ERINKT KN ISTI+ C+L S SQAYVFYKL Q ++ Sbjct: 924 PFGSPRKRRSFFEPIFKELKKKIKKWKTKCFIALTILKEKTKLFRKASKETKKWITQSILFLKGIIKELSKINPIPFFGLREPYELGETKKDSIISNKMIHKSSLQIQSMSWTNYSLTEKKIKDLTKRTNTIKNQIQKILIIKDKKNEFLTQEINSSSNKISYQDKILESSKKFWQIVKRRNIRLIRKFYFFINFFIEKIYMDILLYIINIPRTNTQLFLESTK---KMIENFIHNNEANQERINKTTKNTTHFISTIKTSLSSLSNISIRNKNEKAFCDLSSL--SQAYVFYKLSQTQVI 1219
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_GOSHI (Putative membrane protein ycf1 OS=Gossypium hirsutum GN=ycf1 PE=3 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 5.932e-59 Identity = 147/301 (48.84%), Postives = 176/301 (58.47%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKE------------------------GKIKELSKIN------LREIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKIT--KEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKN--RIISTIQ-----XXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPIL 786 PFGSP+KRRSFFEPIF FI L KE G IKELSKIN LRE +L ET+K+SIIS +MIH+ S++I SM WT S TEKK+KDLT RT+ I+NQI KI K+KK LTQE N SSNK +Y KIL+ SK+ W+I+K+RN RLIRK Y F+ F IEKIY +I + + IPR NT+ F EST+ K+IE IHNNEAN ERINKT KN ISTI+ C+L S SQAYVFYKL Q ++ Sbjct: 927 PFGSPRKRRSFFEPIFKELKKKIKKWKTKCFIALTILKEKTKLFRKASKETKKWITQSILFLKGIIKELSKINPIPFFGLREPYELGETKKDSIISNKMIHKSSLQIQSMAWTNYSLTEKKIKDLTKRTNTIKNQIQKILIIKDKKNEFLTQEINSSSNKISYQDKILESSKKFWQIVKRRNIRLIRKFYFFINFFIEKIYMDILLYIINIPRTNTQLFLESTK---KMIENFIHNNEANQERINKTTKNTTHFISTIKTSLSSLSNISIRNKNEKAFCDLSSL--SQAYVFYKLSQTQVI 1222
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_VITVI (Putative membrane protein ycf1 OS=Vitis vinifera GN=ycf1 PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.183e-53 Identity = 135/300 (45.00%), Postives = 173/300 (57.67%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGK----------------------------IKELSKIN------LREIEKLRETQK--NSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRI--ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPIL 786 PFGSP+KR SFF+PI F+VL KE IKEL KIN LRE+ + ETQK +SII+ QMIH+ SI+I SM+WT S TEKK+KDLT+RTS IR +I KI K+KKK LT E NIS NK +Y+ K L+ K IW+ILK+RN+RLIRK + F+KF IE+IY +I + + IPR N + F EST+ KII+K ++NNE N +RI K N+ +I IS I+ C+L S SQAYVFYKL Q ++ Sbjct: 934 PFGSPRKRPSFFKPILKELEKRIRKFKNKCFLVLTVLKERTKLFIFLRVSKETKKWVIKSVLFINIKKIIKELLKINPTLLFGLREVYESSETQKQKDSIINNQMIHKSSIQIRSMNWTNYSLTEKKVKDLTDRTSTIRKKIEKIIKDKKKLFLTPEINISPNKASYNAKRLESQKSIWQILKRRNSRLIRKLHYFIKFFIERIYIDILLCLINIPRTNAQFFIESTK---KIIDKYVYNNERNQKRIGKPNQKKIHFISIIKRSVSSISNKSSQIFCDLSSL--SQAYVFYKLSQTQVI 1228
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_EUCGG (Putative membrane protein ycf1 OS=Eucalyptus globulus subsp. globulus GN=ycf1 PE=3 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 6.574e-50 Identity = 137/295 (46.44%), Postives = 166/295 (56.27%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKE------------------------GKIKELSKIN------LREIEKLRET--QKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQE--TNISSNKPTYSVKILDPSKRIWRILKK---RNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRIISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQ 774 PFGSP+K+RSFFEPIF F+V++ KE G IKELSK N LR+I++L ET +KN +IS MI+E SI+I MD T S TEKKMKDL +RTS IRNQI KITK+ KKG LT E NISSNK +Y K+L K IW+ LKK N RLIRKSY F KF IE+IY NI I + PRI T+ F +++ K+I+K I+NNE N E+I KTNKN I +L S SQAYVFY+L Q Sbjct: 927 PFGSPRKQRSFFEPIFKELRKKIIKLQKNPFLVIQVLKERINLFLNLSKERKKSVMKTILFLKGIIKELSKRNPIQLFGLRKIDELSETKKEKNGVISNGMINESSIQIRFMDLTDSSLTEKKMKDLDDRTSTIRNQIEKITKDNKKGFLTPEININISSNKISYPTKLLASIKNIWQKLKKFKRINVRLIRKSYSFFKFLIERIYINILICIINSPRITTQLFFDNS---TKMIDKYIYNNETNKEKIAKTNKNTI--RFIWTKKKSISDISKKNSKILLSSFSQAYVFYQLYQ 1216
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_MORIN (Putative membrane protein ycf1 OS=Morus indica GN=ycf1 PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.263e-49 Identity = 132/300 (44.00%), Postives = 167/300 (55.67%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGK------------------------IKELSKIN------LREIE--KLRET--QKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKN------IHNNEANPERINKTNK--NRIISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQ 774 PFGSP+K+ SFFEPIF F +L KE IKELSK+N LREIE +L E+ +KN II ++IHEPSI I S +WT S T+KK++DLTNRT+ NQI KI+K+ KKG L+ NISSNK +Y+ K L+ K I ++LK+RN RLIRKS F+KF IE+IYRNIF+ IP+IN + F KI+ K I+NNE N E+I+KTN+ + ISTI+ CNL SQAYVFYKL Q Sbjct: 920 PFGSPRKQLSFFEPIFKELKKRLIKLKKKCFRILIILKERTKLFLNVSKERKKWVIKNIVFLKKIIKELSKMNPILLVGLREIELYELSESKKEKNLIIDNELIHEPSINIQSTNWTTFSLTKKKIQDLTNRTNTTINQIQKISKDNKKGFLSPHINISSNKMSYNDKRLELPKNILQLLKRRNVRLIRKSNYFIKFFIERIYRNIFLFISNIPKINAQLFFYFFESLKKIVNKTSSYNNYIYNNERNQEKIDKTNQKITQFISTIKESLSNINNKNLETFCNLSYL--SQAYVFYKLSQ 1217
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_BUXMI (Putative membrane protein ycf1 OS=Buxus microphylla GN=ycf1-A PE=3 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 4.711e-48 Identity = 129/292 (44.18%), Postives = 164/292 (56.16%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGK------------------------IKELSKI--NLREIEKLRETQ--KNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKN--RIISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPIL 786 PFGSP+KR SFFEPI FIVL+ KE IKEL+KI LRE+ E + K+ IIS QMIHE SI I SMDWT TEKKMKDLT+RT+ IR +I +I ++KKK LT E IS N+ + K L+ K IW+ILK+RN RLIRK F+KF IE+IY + + IPRI+ + F ES + KI++K+I+N+E N E I++TNKN ISTI+ C+L S SQAYVFYKL Q ++ Sbjct: 916 PFGSPRKRLSFFEPICKELEKKIRKVKKNYFIVLKILKERTKLFIKVSKEKKGWVIKRVLFIKRIIKELNKILFGLREVYDSSENKNRKDYIISNQMIHESSIRIRSMDWTNSLLTEKKMKDLTDRTNTIRKKIERIKRDKKKTFLTSEIKISPNERSCDNKKLESPKNIWQILKRRNTRLIRKWNYFIKFLIERIYIDALPYIINIPRIHGRLFLESKK---KIMDKSIYNHEKNQEGIDETNKNTTHFISTIKRPLSNNNNKNSKIFCDLSSL--SQAYVFYKLSQTQVI 1202
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_LIRTU (Putative membrane protein ycf1 OS=Liriodendron tulipifera GN=ycf1 PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.338e-47 Identity = 122/294 (41.50%), Postives = 166/294 (56.46%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGK------------------------IKELSKIN------LREIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRI--ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPIL 786 PFGS +KR SFFEPI F+VLR E IKE +K+N LR++ + E +K+SI + ++ HE I I S+DWT S TEKKMKDL +RT+ IRN+I +ITK+K+K LT + IS N+ K + K IW+I K+R+ARLIRK + F+K IE+IY +IF+ T+ IPR N F EST+ KII+K+I+N+E N E I++TN+N I ISTI+ C+L S SQAYVFY LLQ+ ++ Sbjct: 899 PFGSSRKRPSFFEPICKELEKKIRKVKKKCFLVLRALGERTKWFLRVLKEKTRWILKTVLFIKRIIKEFAKVNPILLFGLRKVYEPNENRKDSITNNKINHESIIRIRSVDWTNYSLTEKKMKDLADRTTTIRNKIERITKDKRKIFLTPDIKISPNETGCDDKRSESQKHIWQISKRRSARLIRKWHYFMKSFIERIYMDIFLCTINIPRRNAHLFLESTK---KIIDKDIYNDERNKEGIDETNQNAIHFISTIKKSLSNISNNKSQIYCDLSSL--SQAYVFYNLLQIQVI 1187
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_CERDE (Putative membrane protein ycf1 OS=Ceratophyllum demersum GN=ycf1 PE=3 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 2.338e-47 Identity = 121/297 (40.74%), Postives = 165/297 (55.56%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEG------------------------KIKELSKI-----NLREIE----KLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRI--ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPIL 786 PFG +KR SFFEPIF F+VLR FKEG KIKEL+KI LRE+E + E K+SI + +I+E I I S++WT S TEKK+KDL +RT+ I+N+I +I KEKK +T + N+S NK + + K + K W+I K++ ARLIRK + F K IE+IY IF+ T+ IP+IN K F ES + K +K+I+NNE NP+ I++TNKN + IST++ C+L SQAYVFYKL Q ++ Sbjct: 931 PFGYARKRPSFFEPIFKELTKKIQKVKKICFLVLRTFKEGAKGLVKVLKEKASWVIKIVLFIKKKIKELAKIFFFGFGLREVEVEVYESNENGKDSITNNNIINELPIRIRSVNWTNDSLTEKKIKDLADRTTTIQNEIERIKKEKKILFMTPDKNVSPNKLSCNDKRSESQKFFWQISKRKGARLIRKWHYFFKSFIERIYIGIFLCTIYIPKINAKLFLESKKNLQKFFDKSIYNNETNPDGIDETNKNAVHFISTLKKALFNISDKNSSISCDLSYL--SQAYVFYKLSQTQVI 1225
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_TOBAC (Putative membrane protein ycf1 OS=Nicotiana tabacum GN=ycf1 PE=3 SV=2) HSP 1 Score: 186.037 bits (471), Expect = 1.979e-46 Identity = 127/295 (43.05%), Postives = 169/295 (57.29%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGKIK-------------------------ELSKIN------LREIEKLRET--QKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRIISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPIL 786 PFGSP+KR SFFEPIF FI L+ FK GKIK ELSK+N L+EI++ ET +K+S++S Q+I+E +I S +W S E KMKDLT+RTS I+NQI +ITKEKKK +T E +IS NK T ++K + K+I++ILK+RN RLI K + FLK I+++Y ++F+S + IPRINT+ F EST K+I+K I NNE N E+IN K ISTI+ +L SQAYVFYKL Q ++ Sbjct: 959 PFGSPRKRPSFFEPIFKELEKKIGKFKKKYFITLKVFK-GKIKLFRRISKETKKWLIKSSLFIKKMKKELSKVNPIVLFRLKEIDESNETKKEKDSLMSNQIINESFSQIESGNWPNSSLIESKMKDLTDRTSTIKNQIERITKEKKK--VTPEIDISPNK-TNNIKKFESPKKIFQILKRRNTRLIWKFHYFLKLFIQRLYIDLFLSIINIPRINTQLFLESTN---KLIDKYISNNEINQEKINNQKKIHFISTIKKSLYNISKKNSHIFFDLSYL--SQAYVFYKLSQPQVI 1244 The following BLAST results are available for this feature:
BLAST of CX069906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069906 ID=CX069906; Name=CX069906; organism=Citrus sinensis; type=EST; length=786bpback to top |