CX069906
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_LOBMA (Putative membrane protein ycf1 OS=Lobularia maritima GN=ycf1-A PE=3 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 6.589e-42 Identity = 116/292 (39.73%), Postives = 161/292 (55.14%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKE------------------------GKIKELSKINL------REIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKN-RIISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPI 783 PFGS +K+ SFFEPI+ F+VLR FKE GKIK LSK N+ REI ++ ET+ +SI+S QMI S++ SM+WT +E K+K+L +R IRNQ +I+KEK+ +LT S NKP Y KI++ SK+ W+ LK++N RLIRKS+ F+KF IE++ IF+ + IPRI T+ F EST+ I++K I+ NE N ++INK ISTI+ C+L SQAYVFYKL ++ + Sbjct: 898 PFGSAKKKPSFFEPIYKELKKRIKKFKTKPFLVLRIFKEREKFFLKVAKEMKNWIIKNFLFLKGKIKNLSKRNIIPVFGPREIYEVNETKNDSIMSNQMIENLSVQKKSMEWTNSLLSENKLKNLIDRIKTIRNQTEEISKEKE--NLTN----SCNKPRYDSKIIESSKKSWQTLKRKNTRLIRKSFFFIKFCIEQLSIAIFLGIINIPRITTQLFFESTK---TILDKYIYKNEENGKKINKKKTTIYFISTIK-NLLSKKKKISYDLCSL-----SQAYVFYKLSKMQV 1174
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_CALFG (Putative membrane protein ycf1 OS=Calycanthus floridus var. glaucus GN=ycf1 PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.468e-41 Identity = 112/291 (38.49%), Postives = 159/291 (54.64%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGK---------------------IKELSKINL------REIEKLRETQKNSI--ISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRIISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPIL 786 PFGS +KR SFFEPI F+VL KE IKE +K+N +++ + E +K+SI IS +++ EP+I I SMDWT S TEKKMKDL +RT+ IRNQI +ITKEK+ LT + N S N+ + K + K IW+I K+R+A IRK F+K E+IY +IF+ + IPR+N + F EST+ KI++K I+N++ E I++TN N++IS + +L S SQAY+FYKL Q ++ Sbjct: 905 PFGSSRKRPSFFEPILKELEKKIRKAKKKYFLVLSVLKEWFRKVSKEKTRWIRKIVLFIKKIIKEFAKVNSILLFGRKKVYESNENKKDSITIISNKILSEPTIRIRSMDWTNYSLTEKKMKDLADRTTTIRNQIERITKEKRTIFLTPDRNGSPNETSCDDKRSESQKHIWQISKRRSAWFIRKWRYFIKIFSERIYIDIFLCAINIPRVNAQLFFESTK---KILDKYIYNDQRKKEGIDETNPNKLISISKKYFSNISNKKSRIYWDLSSL--SQAYLFYKLSQTQVI 1190
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_CRUWA (Putative membrane protein ycf1 OS=Crucihimalaya wallichii GN=ycf1-A PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 7.285e-41 Identity = 117/291 (40.21%), Postives = 156/291 (53.61%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKE------------------------GKIKELSKINL------REIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRIISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPI 783 PFGS QK+ SF EPI F+VLR FK+ GKIK+LSK NL EI +L ET+K+SIIS Q+IH+ S++ SM+WT S +EKK K+L +R IRN+I +I+KEK Q S K Y KI++ SK+IW+ K++N RLIRKS F+KF IE++ IF+ + I RI T+ F EST+ I++K I+ N+ E+ NK N ISTI+ C+L SQAYVFYKL Q+ I Sbjct: 899 PFGSAQKKPSFVEPISKELKKRIKKFKTKPFLVLRIFKKRATILLKVTKEMKNWTLKNFLFIKGKIKDLSKQNLIPLFGPSEIYELNETKKDSIISNQIIHQLSVQNKSMEWTNSSLSEKKKKNLIDRIKTIRNKIDEISKEK------QNLTNSCTKLRYDSKIIESSKKIWQTFKRKNTRLIRKSIFFIKFCIEQLSIAIFLGIINIQRITTQLFFESTK---IILDKYIYKNDEIGEKKNKKNTIYFISTIK-NLISNKKKISYDLCSL-----SQAYVFYKLSQIKI 1174
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_AETCO (Putative membrane protein ycf1 OS=Aethionema cordifolium GN=ycf1-A PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 9.515e-41 Identity = 117/289 (40.48%), Postives = 160/289 (55.36%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKE---------------------GKIKELSKIN------LREIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERI-NKTNKNRIISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPI 783 PFGS QK+ SFFEP F S +VLR FKE GK +LSK N LREI +L ET+ +SI S +IHE S++ SM+W S +E K+K+L +R + IRNQI I+KEKKK TN SSNK Y KI++ SK+ W+I+K+ N RLIRK + F+KF +E++ I + + IPR+ T+ F EST+ KI++K+I+ NE ++I K N +ISTI+ C+L SQAYVFYKL Q+ + Sbjct: 898 PFGSAQKQPSFFEPFFKEFKKKMKKYKTKSLLVLRFFKERDKIFAKEIKNGILKNFIFIKGKRNDLSKGNRIPLFDLREIYELTETKNDSITSNPIIHELSVQNRSMEWKNSSFSENKIKNLIDRINTIRNQIEAISKEKKK-----ITN-SSNKTPYESKIIESSKKKWQIVKRINTRLIRKIFYFVKFCLEQLSLGIVVGIMNIPRMTTQFFFESTK---KILDKSIYKNEETEDKITKKKNTIYLISTIK-KLISNKKKMSYDICSL-----SQAYVFYKLSQLQV 1171
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_NANDO (Putative membrane protein ycf1 OS=Nandina domestica GN=ycf1 PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.768e-40 Identity = 121/299 (40.47%), Postives = 154/299 (51.51%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGK------------------------IKELSK--------INLREIEK--LRETQKN--SIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRI--ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPI 783 PFGSP+KR SFFEPI+ FI LR KE +KEL+K LREI++ + QK +I S Q+IHE I I S+DW S T KK+KD+ +RTS IRNQI KITK+KKK LT + NI+ NK K L+ K+IW+ LK+R+ RLIRK Y FLKF IE+IY +I + RI K F E+ + K+ KN N+E N + I++TN N I ISTI+ S SQAYVFYKL Q + Sbjct: 883 PFGSPRKRPSFFEPIWKEIEKNIIKMKKKCFIALRILKERTKWFIRVSKEKTRWVIKIFLFIKRIMKELAKAKVSPIPLFGLREIDESSINTNQKYYINIKSNQIIHESPIRIRSLDWINYSLTAKKIKDVVDRTSTIRNQIEKITKDKKKLFLTPDRNINPNKIGCDDKGLESLKKIWQKLKRRSNRLIRKCYYFLKFFIERIYTDILFCIINSLRIKVKLFLEA---KNKLFYKNSSNDETNKKGIDETNPNTIHFISTIKKSLSNINNSNNNSQIFCDLDSLSQAYVFYKLSQTQV 1178
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_LEPVR (Putative membrane protein ycf1 OS=Lepidium virginicum GN=ycf1-A PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.061e-39 Identity = 119/293 (40.61%), Postives = 158/293 (53.92%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEG------------------------KIKELSKINL------REIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRI--ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPI 783 PFGS Q++ SFF+PI F+VL FKE K K LSK N REI +L ET+K+SI+S QMI+E S++ SM+W S +E K+K+L +R IRNQI +I+KEK+ +LT S NK Y KI++ +KRIW+I K++N R IRKS F+KF IE++ IF+ IPRI T+ F EST+ I+ K I+ NE E+INK KN I ISTI+ C+L SQAYVFYKL Q+ + Sbjct: 846 PFGSAQRKPSFFQPISKELKKRIKKLKTKPFLVLGIFKERATICLKVAKEIKNWILKNSLFIKVKRKNLSKPNKIPVFGPREIFELNETKKDSIMSNQMIYELSVQNKSMEWRNSSLSENKIKNLIDRIKTIRNQIEEISKEKE--NLTN----SCNKLRYDSKIIESAKRIWQIFKRKNTRFIRKSIFFIKFCIEQLSIAIFLGISNIPRITTQLFFESTK---TILNKYIYKNEEKVEKINK-KKNTIYFISTIK-NLISNKKKISYDLCSL-----SQAYVFYKLSQIQV 1122
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_AETGR (Putative membrane protein ycf1 OS=Aethionema grandiflora GN=ycf1-A PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.997e-39 Identity = 118/292 (40.41%), Postives = 158/292 (54.11%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKE------------------------GKIKELSKIN------LREIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERIN-KTNKNRIISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPI 783 PFGS K+ SFF PI SF VLR FKE GK +LSK N LREI++L ET+ +SI S +IHE S++ SM+W S +E K+K+ +R + IRNQI I+KEKKK TN S NKP Y KI++ SK+ W+I+K +N RLIRK++ F+KF IE++ IF + IPRI T+ EST+ +I +K+I+ NE E+IN K N +ISTI+ C+L SQAYVFYKL Q+ + Sbjct: 905 PFGSAHKQPSFFGPISKELKKKMKKYKTKSFQVLRFFKERDKIFLKGAKEIKNWIMKNFVFIKGKRNDLSKGNRIPLLGLREIDELTETKNDSITSNPIIHELSVQNRSMEWKNSSFSENKIKNSIDRINTIRNQIEAISKEKKK-----ITN-SCNKPPYDSKIIESSKKKWQIVKSKNTRLIRKTFYFVKFCIEQLSLGIFGGIINIPRIITQLLFESTK---QIRDKSIYKNEETQEKINKKKNTIYLISTIK-KFKSNKKKISYDLCSL-----SQAYVFYKLSQLQV 1181
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_LEMMI (Putative membrane protein ycf1 OS=Lemna minor GN=ycf1 PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 5.221e-39 Identity = 114/297 (38.38%), Postives = 160/297 (53.87%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFI--VLRDFKEGK------------------------IKELSKIN--------LREIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRI--ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPI 783 PFGSP+K+ SFF+PI+ + VLR K+ + +KEL KIN ++ + E +K+SIIS + E +I I S +WTK S EKK+KDL +RT+ IRNQI +ITK+KKK +T +IS NK + K + K IW+I K+++ RLIRK Y FLK+ IE+IY +I + T+ R N + F EST+ K+I K +++E N E I++TN+N I IST+Q C+L S SQAYVFY L QV + Sbjct: 956 PFGSPRKQPSFFQPIWKELNNKIRKLEKTFSLSLVLRVSKKTRKWFLKISKEKTRWVNKIVLVIKRIMKELEKINPIFLFGFGKVKVYESNENRKDSIISNKTTDESTIRIRSTNWTKHSLIEKKVKDLADRTTTIRNQIEQITKDKKKIVVTPGISISPNKTNCADKNSELQKPIWQIFKRKSTRLIRKFYYFLKYFIERIYSDILLCTINSLRTNAQLFLESTK---KMINKFFYHDETNQEGIDQTNQNTIHFISTMQKSLSNISNKNSNISCDLSSL--SQAYVFYTLSQVQV 1247
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_CAPBU (Putative membrane protein ycf1 OS=Capsella bursa-pastoris GN=ycf1-A PE=3 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 6.819e-39 Identity = 114/293 (38.91%), Postives = 157/293 (53.58%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKE------------------------GKIKELSKINL------REIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSN--KPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRIISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPI 783 PFGS Q++ SFFEPI S +VLR FKE GKIK+LSK N REI +L ET+K+SII Q+IHE S++ SM+WT S +E K+ +L +R IRNQI +I+KEK+ N+++N K Y K ++ SK+IW+ K++N RLIRKS F KF IE++ IF+ + IP+I T+ F ES + I++K+I+ NE E+ K N ISTI+ C+L SQAYVFYKL Q+ + Sbjct: 897 PFGSAQRKPSFFEPISKELKKRIKKLKTKSLVVLRIFKERATIFLKVANEIKNWILKNFIFIKGKIKDLSKRNPISLFGPREIYELNETKKDSIIRNQIIHELSVQNKSMEWTNSSLSENKITNLIDRIKTIRNQIEEISKEKQ--------NLTNNCTKLRYDSKKIESSKKIWQAFKRKNTRLIRKSIFFFKFCIEQLSIAIFLGIINIPKITTQLFFESIK---TILDKSIYKNEEKGEK--KKNPFYFISTIK-NLISNKKKMSYDLCSL-----SQAYVFYKLSQIKV 1170
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_AMBTC (Putative membrane protein ycf1 OS=Amborella trichopoda GN=ycf1 PE=3 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 6.819e-39 Identity = 111/287 (38.68%), Postives = 155/287 (54.01%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGKI-------------KELSKIN------LREIEKLRETQKNSI-----ISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQI--YKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRI-ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVP 780 PFG +K SFFEPI F+ +R FKE KI KEL+K N L+ + E +K+SI IS+ I + I SMDWT S TE+K KDL+++T+ IR+QI +IT++KK LT + NIS N+ +YS K + K IW++ K+R+ RL+ K F+K IE+I+RN+F+ + +PRINT+ F EST+ KII+K I N+E N I++ NK +I I + + S SQAYVFYKL Q P Sbjct: 852 PFGPARKGPSFFEPIHKELEKKFKKGKKKWFLFVRIFKEKKIWVIKRVLFIKGVMKELTKANPVFLFGLKRVYDGSENRKDSISNNKTISESPIRKSPIRTGSMDWTNSSLTERKRKDLSDKTTTIRDQIERIRITRDKKTNFLTIDMNISPNETSYSDKRSESQKPIWQVSKRRSTRLLYKWRYFMKSFIERIHRNVFLCMINLPRINTQLFLESTK---KIIDKYISNDEKNQSGIDEKNKKKIHFIFISTRKLLSTISNKKTNNSKIHCSLSQAYVFYKLSQKP 1135 The following BLAST results are available for this feature:
BLAST of CX069906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069906 ID=CX069906; Name=CX069906; organism=Citrus sinensis; type=EST; length=786bpback to top |