CX069906
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_LOTJA (Putative membrane protein ycf1 OS=Lotus japonicus GN=ycf1 PE=3 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 1.289e-29 Identity = 98/301 (32.56%), Postives = 154/301 (51.16%), Query Frame = 1 Query: 1 PF-GSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKE------GKIKELSK--------------------------INLREIEKLRETQKNSIISKQ--MIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKF---GIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRIISTIQXXXXXXXXXXXXXXCNLLSFSQ-SQAYVFYKLLQVPIL 786 PF G P+ R SFF+PI F++L+ E +KE SK ++I++L + +KN I+K +I+E +I I +++ T S TEKK+K + +T +I +I ++TKE K G L E N +S K + + K L+ K+I +IL++RN +L K Y F KF ++K+Y +IF+ +++PRIN + F EST+ KII ++I+N + N E I+KTN++ II I N S SQAYVF+K+ Q+ +L Sbjct: 893 PFSGYPRNRFSFFDPILKELKKKMKKLKNNFFLILKIVNERTKNFITTLKETSKRIIQSILKKVLFLNKKIKKLYNYLFLFRFKKIDELNQNKKNFPITKNNPIIYESTILIQAINKTNCSLTEKKIKAINAKTKKIIKKIERMTKENKGGFLISEINSNSKKTSSNTKGLELEKKILQILQRRNVQLTHKLYSFFKFLLNFMKKVYTDIFLCIVSVPRINVQFFLESTK---KIINQSIYNKKTNEEIIDKTNQS-IIHFISIINKSSNTKNTNSAANSYEVSALSQAYVFFKISQIQVL 1189
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_PHAVU (Putative membrane protein ycf1 OS=Phaseolus vulgaris GN=ycf1 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.058e-27 Identity = 99/293 (33.79%), Postives = 145/293 (49.49%), Query Frame = 1 Query: 1 PFGS-PQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGKIKELSKINLRE----IEKLRETQKNSII-------------------------SKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKE-KKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRIISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPIL 786 PF S P+ SFF+PI +F VL+ F E K K I + + I ++ E+ K SI+ S+ I E +I I S+ T + +KK+KDL + + +I K+ KE KK+G + ETNI SNK K ++ K+ +ILK+ + RL +KS+ FLKF I+KIY +IF+ + IP+I+ +PF EST+ K + K I+ NE N ER KTN++ I + +SF SQAYVF+ LLQ I+ Sbjct: 902 PFSSSPKNLFSFFDPILKELKKKTKQFEFFTFRVLKVFSE-KFKLFLNIVIEKAKWIINRIMESLKKSIVFLTKKRKEFFESLFIQWKPKKLDELSENKIDEATISIQSIKSTNFALKKKKIKDLNTKRKVVIKKIKKLKKEEKKRGLVISETNIDSNKTISDSKRIEFEKKNLQILKRIHIRLTKKSHSFLKFFIKKIYLDIFLYIICIPKIHIQPFIESTK---KFLNKWIYGNETNAERTYKTNQSIIPFISKLHKYFHNRNLNSHNYFDVSF-LSQAYVFFNLLQTRII 1189
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1B_PIPCE (Putative membrane protein ycf1 C-terminal part OS=Piper cenocladum GN=ycf1 PE=5 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.021e-26 Identity = 86/230 (37.39%), Postives = 129/230 (56.09%), Query Frame = 1 Query: 121 KIKELSKINLREIEKLRETQKNSIISKQMIHEPSIEI-SSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTY--SVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRI--ISTIQXXXXXXXXXXXXXXCNLLS----FSQSQAYVFYKLLQVPI 783 K+ + ++I + E +KNSI+S ++ +E +I+ S++D LS TEKK+KDL++ TS IRNQI ++ K+KK+ L + N S+ + + K + K IW+I KKR+ RLIRK FLK I+KIY + T++ K F EST+K + K+I+N+E + I++ N+N I ISTI N L+ FS SQAYVF KL Q + Sbjct: 656 KVNPTPLVRSQKIYESNENEKNSILSNKITYESNIQKKSTIDLKNLSLTEKKIKDLSDHTSIIRNQIERVAKDKKRIYLISDRNPSTGETGWYDKDKGRESKKGIWQIFKKRSTRLIRKWPYFLKSLIQKIYTETLLFTISSTDDYAKFFIESTKKS---LNKHIYNDEKDKRVIDEINQNTIEFISTINRSFSNITNIFNNSNKNSLTYFELFSLSQAYVFLKLSQTQV 882
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_HELAN (Putative membrane protein ycf1 OS=Helianthus annuus GN=ycf1 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.275e-26 Identity = 105/288 (36.46%), Postives = 142/288 (49.31%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGKIKELS----------------KINL---REIEKLRETQ--KNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRI--ISTIQXXXXXXXXXXXXXXCNL---LSFSQSQAYVFYKLLQVPIL 786 PFG P+K SFFEPIF +F + R K+ K KE KI L REI + ET+ K+SIIS ++IHE + T S+TE++MK +R + IRNQI + K KK +L ++ N +N + IW+ILK+ N LI +K IEKIY +IF+ + + RI + F EST+ KIIEK I NNE N E+INKT +N+I IST N+ LS+ SQ YVF KL Q ++ Sbjct: 842 PFGPPRKTPSFFEPIFKDIDYKVEIRKF-NFRIRRALKKIKKKEAKVFFFVKQILKELLKGKKIPLFITREIYESNETEREKDSIISNKIIHESLSQNRPKGLTNYSQTEEEMKHRIDRRNTIRNQIEIMKKNKKTVTLKKKINKKNNG--------EALPTIWKILKRNNIELI------VKIFIEKIYIDIFLCIINMRRIALQLFMESTK---KIIEKYIDNNETNKEKINKTKQNQIDFISTRTIKKAFDNLRNSKRKSNIFFELSY-LSQKYVFLKLSQTQVI 1110
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_EPIVI (Putative membrane protein ycf1 OS=Epifagus virginiana GN=ycf1 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.285e-25 Identity = 90/263 (34.22%), Postives = 138/263 (52.47%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGKI-KELSKINLREIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRI--WRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRIISTIQ-XXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQV 777 PF SP+K+ S F I +F+ K GK+ K+ K++ I+ +++ +K+ +IS Q+IHE + S+ W S E DL ++TS+I NQ +I+K+KK+ ++ + NK Y+ K KR+ W+IL +++ R+I K F KF IE+IY N F+S++ I +IN + F + + KII+K+I NNE E IN NKN I+ + L + SQAYVFYKL QV Sbjct: 931 PFDSPRKQLSLFNFI--------------NFV-----KFGKLNKKFIKLSKETIKWVKKKKKDYLISNQIIHESLSKNPSLSWINYSFKEM---DLADQTSKILNQTERISKDKKQVTIKIFNILCENKINYNTK-----KRLEKWKILIRKSERIIIKLLFFFKFFIERIYTNFFLSSINILKINKEIFIKLIK---KIIDKSIFNNERKQELINTKNKNPILFISKLLYNISNSKKNSYTFYGLDLYYVSQAYVFYKLSQV 1163
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_LACSA (Putative membrane protein ycf1 OS=Lactuca sativa GN=ycf1 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 7.319e-25 Identity = 101/287 (35.19%), Postives = 136/287 (47.39%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKE-------------GKIKELSKINL------REIEKLRETQ--KNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPERINKTNKNRI----ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPIL 786 PFG P+K SFFEPIF +F V R FK+ KIKEL K N REI + ETQ K+SIIS Q+IHE +I S WT S+ E++MK +R IRN+I + K K + + S++I +ILK +N L+ +KF IEKIY IF+ + + RI + F +ST+K + +K I+NNE N ERINKT +N+I TI+ SQ YVF+KL Q I+ Sbjct: 845 PFGPPRKTPSFFEPIFKDIDYKVEIRKL-NFRVRRIFKKIKKKEAKAFFFIKQKIKELLKGNKIPLFLPREIYESSETQTEKDSIISNQIIHESLSQIRSTGWTNYSQAEEEMKHRIDRRKTIRNEIEIMKKNK-------------------INNAESSQKILKILKIKNIELL------VKFFIEKIYIEIFLCIINMRRIPLQLFIQSTKKIID-NDKYINNNETNQERINKTKQNKIDFILSMTIKRAFDNLRNSKRKSDIFFDLSYLSQKYVFFKLSQTQII 1104
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_CUSRE (Putative membrane protein ycf1 OS=Cuscuta reflexa GN=ycf1 PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.799e-22 Identity = 85/266 (31.95%), Postives = 134/266 (50.38%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGKIKELSKINLREIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKR--NARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPER--INKTNKNRIISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPIL 786 PFG P+K SFFEP+ K + SK+ + ++ + +K+ IS Q+I+E +I + S +KM+++ +RTS I+ +I ++T+EKK+ +T E I K +Y + + +K I++ +K + RLI K + F K ++IY NIF+ T+ I RI T+ F EST+ K+I K I N E N +R INK KN+ + C+L + SQAYVFYK+ Q +L Sbjct: 869 PFGHPRKTPSFFEPVLQELDKKIVNINI------------KARIFSKVKINLFKRFSK-EKDFQISNQIINESFQQIEEIPGCTNSSLIEKMQNMAHRTSTIKKEIERVTEEKKR--VTLERYICFYKRSYRLAL---AKNIFKKVKVKVTKNRLICKFFFFKKLFNQRIYNNIFLETIYICRITTQLFLESTK---KLIYKYIFNYERNKKRIDINKETKNKFNLISKLKTYNHCKKNSYLSCDLSNL--SQAYVFYKIPQTGVL 1111
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_DAUCA (Putative membrane protein ycf1 OS=Daucus carota GN=ycf1 PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.182e-20 Identity = 101/309 (32.69%), Postives = 138/309 (44.66%), Query Frame = 1 Query: 4 FGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLR-----------DFKEGKI---------------KELSKIN------LREIEKLRETQKNS--IISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKE-----KKKGSLTQET-NISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTR----KQMKI----IEKNIHNNEANPERINKTNKNRIISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPIL 786 FGS + SFF+PI + VLR D KE K KEL KI+ L+++ + ET K II Q IH+ I+I S D S +KK+K+LT+RTS IR + + KE KK+GS + + N P +KIL +K+R+ RLI K YLF+ I++IY +IF+ + I RI+T+ ES K + I K +NN+ N E I K + ISTI+ S SQAYVFYKL Q PI+ Sbjct: 894 FGSIPPKPSFFKPILKELKKKMQKTKNNNLKVLRVLKERTKDFLQDSKEPKEVIIKNVLFLFIKRIKKELFKIHPTRLFILKKVYESGETNKKKDYIIRNQQIHDSFIKIKSTDNKNDSLRDKKIKNLTDRTSTIRTKTKGLMKEKNSNAKKRGSPNKTSFNRKKKSPNILLKILK--------IKRRSTRLIYKFYLFITIFIKRIYIDIFVCIIHIARISTQLLLESINFCFDKYIYIYNNKTNKTNYNNKTNQE-IKKKKEINFISTIKSALYNIQNSKRNSRLFFDLSSLSQAYVFYKLSQTPII 1193
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_CUSEX (Putative membrane protein ycf1 OS=Cuscuta exaltata GN=ycf1 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.080e-18 Identity = 82/265 (30.94%), Postives = 131/265 (49.43%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFIVLRDFKEGKIKELSKINL-REIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDLTNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQMKIIEKNIHNNEANPER--INKTNKNRIISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPIL 786 PFG P+K FFEP+ + +I KINL + + K + Q I KQ+++E +I + S +KM+++++RT I+ +I ++T++KKK +T E IS+ K +Y + + SK I +++K LI K F K +++Y +IF+ T+ I R+ T+ F EST+ K I K+I NE +R INK KN+I + C+ + SQAYVFYK+ Q +L Sbjct: 808 PFGHPRKTPFFFEPVLQELDKKIVNI------------KARIFSKVKINLFKRVSKENDFQ----IRKQIMNESFRQIEEIPSCTNSSLIEKMRNMSDRTRTIKKKIERMTEDKKK--VTLELYISTYKRSYRLAL---SKTICKMVKV----LIWKFSYFQKLLNQRVYNDIFLYTIYICRMTTQLFLESTK---KFISKSILKNERTKKRININKETKNKIHFLSKLKTSKNCKKNLDLSCDFSNL--SQAYVFYKISQTGVL 1042
BLAST of CX069906 vs. ExPASy Swiss-Prot
Match: YCF1_PELHO (Putative membrane protein ycf1 OS=Pelargonium hortorum GN=ycf1-A PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.968e-15 Identity = 83/278 (29.86%), Postives = 127/278 (45.68%), Query Frame = 1 Query: 1 PFGSPQKRRSFFEPIFXXXXXXXXXXXXXSFI---VLRDFKEGKIKELSKINLREIEKLRETQKNSIISKQMIHEPSIEISSMDWTKLSRTEKKMKDL-TNRTSRIRNQIYKITKEKKKGSLTQETNISSNKPTYSVKILDPSKRIWRILKKRNARLIRKSYLFLKFGIEKIYRNIFISTLTIPRINTKPFRESTRKQ--MKIIE------KNIHNNEANPERI-----NKTNKNRIISTIQXXXXXXXXXXXXXXCNLLSF---SQSQAYVFYKLLQ 774 PFG+ +K FF+ +F + + + + K+G +K K LR+ +L QK S SK + + +++ S+ KK K+ ++T I N+I ++ KEKKK +T+ISS K + K + +R+ +ILK+R AR IRKS +F K+ IE IY I + + E +K+ +K++ K N+ + I K KNR ISTI+ L F S SQAYVFYKL Q Sbjct: 1258 PFGTARKPYPFFKTVFEELKKKKASQELKNLLTSGIRKLQKKGFLKFKKKGFLRK--RLLAFQKKSFQSKLLKGVKVKKRTNLKKGPQSKLTKKKKERKVDKTRAIINEIERVLKEKKKRLFIIQTSISSTKTSSHSKTSEALRRLSKILKRRKARFIRKSTIFRKWIIEWIYVKILFDLKNRFDLKKRFLDEMNKKKSCLKMVAQFFFQFKKKRKNKKIDKAIKGINKKKRKKNRFISTIKKHSFNMRNSQISKSQKTLVFDLSSLSQAYVFYKLSQ 1533 The following BLAST results are available for this feature:
BLAST of CX069906 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069906 ID=CX069906; Name=CX069906; organism=Citrus sinensis; type=EST; length=786bpback to top |