CX069843
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_LEMMI (Putative membrane protein ycf1 OS=Lemna minor GN=ycf1 PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.635e-56 Identity = 123/259 (47.49%), Postives = 162/259 (62.55%), Query Frame = 1 Query: 1 ERINKTNKNRI--ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPILNFYNLRPVLQYHGTSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLVPQEWRNRANQHCMAQNKDLIKRDSYEKNGLTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSLNYEDKKDSYIDRSLVQVNNKEEYYSNYNRKKVK----LLAMLGSISINNYIGEDDIMDMEKFLYRKYFD 759 E I++TN+N I IST+Q C+L S SQ AYVFY L QV + N Y LR V QYHGT LFLK+ IKD+ G+F+Y+ +HK + G N K+ L HYQY+LS+ +W+RLVPQ+WRNR NQ C Q KD I DSY+KN L HY KQ+ + D QK KK+Y+YDLL++K +NYED DSYI S +QVN + N+N +K + A++G I I++Y+GE+ + EK L RKYFD Sbjct: 1196 EGIDQTNQNTIHFISTMQKSLSNISNKNSNISCDLSSLSQ--AYVFYTLSQVQVNNKYYLRSVFQYHGTHLFLKDRIKDYCGTRGLFDYKPKHKKVDKSGINEWKNWLKSHYQYNLSQTQWSRLVPQKWRNRVNQRCTIQKKDSIILDSYKKNQLIHYVKQNDYGIDSWTGQKEKLKKNYKYDLLAHKYMNYEDGGDSYIYASPLQVNRDPKIPYNFNTQKTQKPESFYALVG-IDISDYLGEESSLYGEKNLDRKYFD 1451
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_SOYBN (Putative membrane protein ycf1 OS=Glycine max GN=ycf1-A PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 4.970e-55 Identity = 129/261 (49.43%), Postives = 161/261 (61.69%), Query Frame = 1 Query: 1 ERINKTNKNRI-ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPILNF--YNLRPVLQYHGTSLFLKNEIKD-FFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHY-QYDLSRIKWARLVPQEWRNRANQHCMAQNKDLIKRDSYEKNGLTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSLNYEDKKDSYI--DRSLVQVNNKEEYYSNYNRKKVKLLAMLGSISINNYIGEDDIMDMEKFLYRKYFDW 762 ERI KTN++ I +I C++ SF SQAYVF+ LL I+N Y LR V QYHG FLKNEIKD FF GIF+Y+L+H N RN + L HY QYDLS+ +W+RLVPQ+WRNR ++ +AQNKDL K +SYEK+ L Y++Q + K +K YRYDLLSY +NY DKKDSYI RSL QV + SNYN K +L ++ ++ I NYI ED I+DMEK LYRKYFDW Sbjct: 1150 ERIYKTNQSIIRFISILHKYFHTRNPNSHNSCDI-SFL-SQAYVFFNLLHTRIININIYKLRSVFQYHGIFFFLKNEIKDSFFGAQGIFHYKLKHNNPLNSVRNQWTNWLKDHYYQYDLSKSRWSRLVPQKWRNRITEYRIAQNKDLTKCNSYEKSQLILYKEQQ------VNALKKKIRKQYRYDLLSYNFINYADKKDSYIYGYRSLFQVKKNQVISSNYNTYKKELFDIIDNLFIKNYISEDAILDMEKNLYRKYFDW 1402
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_CHLSC (Putative membrane protein ycf1 OS=Chloranthus spicatus GN=ycf1-A PE=3 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.107e-54 Identity = 124/260 (47.69%), Postives = 160/260 (61.54%), Query Frame = 1 Query: 1 ERINKTNKNRI--ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPILNFYNLRPVLQYHGTSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLVPQEWRNRANQHCMAQNKDLIKRDSY--EKNGLTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSLNYEDKKDSYIDRSLVQVNNKEEYYSNYNRKKVKLLAMLGSISINNYIGEDDIMDM--EKFLYRKYFDW 762 E I++TN N I ISTI+ S SQAYVFYKL ++ ++N Y L LQYH T LFLK+ IKD+ GIF+ + RHK N G N K+ L GHYQY LS+ KW+RLVP++WRNR NQ M NKD K +SY EK+ L HY+K++ D L +QK FKKH RYDLLS+K + YED KDS I SL+QVN +E NY K K + G I+I++Y+GE+ I+D+ ++ RKYFDW Sbjct: 1176 EGIDETNLNIIHFISTIKKSLSNTNISNKNLQIYCDLSSLSQAYVFYKLSKIKVINLYRLGSALQYHETYLFLKDRIKDYCGTQGIFDSESRHKKPQNSGMNEWKNWLRGHYQYKLSQTKWSRLVPRKWRNRVNQRRMIPNKDSKKWNSYEKEKDQLIHYDKKNDSAVDSLPSQKEKFKKHSRYDLLSHKYIIYEDGKDSSIYGSLLQVNRNQEIPYNYKTHKPKPFYVPGGIAISDYLGEEYIIDIDTDQNPDRKYFDW 1435
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_COFAR (Putative membrane protein ycf1 OS=Coffea arabica GN=ycf1 PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.599e-53 Identity = 126/258 (48.84%), Postives = 155/258 (60.08%), Query Frame = 1 Query: 1 ERINKTNKNRI--ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPILNFYNLRPVLQYHGTSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLVPQEWRNRANQHCMAQNKDLIKRDSYEKNGLTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSLNYEDKKDSYIDRS--LVQVNNKEEYYSNYNRKKVKLLAMLGSISINNYIGEDDIMDMEKFLYRKYFDW 762 ERINK N+N I ISTI+ LS+ SQAYVFYKL Q + N Y LR Y GTS FLK EIK FEK GI +L K L ++G + K L GHYQYDL I+W++L+ ++WRNR NQH MAQN++ K +SYEK HY+KQ E L NQK NF+K+ RYDLLSYK +NY+ +D I S VQVN +++Y N N K L ML SI IN Y+ + +I MEK RKYFDW Sbjct: 1183 ERINKKNQNTIYFISTIKKSIDTINNKTNSYIFCDLSYL-SQAYVFYKLSQTKVSNLYKLRSFFHYLGTSFFLKTEIKHSFEKQGIIQNELSLKKLPSYGMDQWKGWLKGHYQYDLPSIRWSKLISEKWRNRVNQHHMAQNQN-FKLNSYEKG---HYKKQKDSEVYSLLNQKENFQKNSRYDLLSYKYINYQKMRDPSIYESPFQVQVNKNQDFYYNSNTYKHNLFDMLESIPINPYLVKGNIRYMEKNTDRKYFDW 1435
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_CERDE (Putative membrane protein ycf1 OS=Ceratophyllum demersum GN=ycf1 PE=3 SV=1) HSP 1 Score: 209.534 bits (532), Expect = 1.599e-53 Identity = 113/253 (44.66%), Postives = 153/253 (60.47%), Query Frame = 1 Query: 7 INKTNKNRI--ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPILNFYNLRPVLQYHGTSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLVPQEWRNRANQHCMAQNKDLIKRDSYEKNGLTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSLNYEDKKDSYIDRSLVQVNNKEEYYSNYNRKKVKLLAMLGSISINNYIGEDDIMDMEKFLYRKYFD 759 I++TNKN + IST++ C+L SQ AYVFYKL Q ++N Y+LR V QY G FLK+ IKD+ + GIF+ + R P N N K+ L GHYQY+LS+ +W+RLVPQ+W+NR NQ Q KD K SYE++ L HY+ + + L QK KKHYRYDLLS+K LN+ED+ +SYI S +QVN E NY K K LG ++I++Y+ E+ ++D +K RKYFD Sbjct: 1175 IDETNKNAVHFISTLKKALFNISDKNSSISCDLSYLSQ--AYVFYKLSQTQVINKYDLRYVFQYQGAHSFLKDRIKDYLQTRGIFHSESRQNPFRNSEINDWKNWLRGHYQYNLSQTRWSRLVPQQWKNRVNQRHRIQKKDSQKWHSYEQDQLIHYKTKKNYAVHSLPMQKEKLKKHYRYDLLSHKYLNFEDRNNSYIYGSPLQVNGDREITYNYKTHKSKSFCTLGGLTISDYLKEEYLIDTDKNSDRKYFD 1425
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_DAUCA (Putative membrane protein ycf1 OS=Daucus carota GN=ycf1 PE=3 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.088e-53 Identity = 109/219 (49.77%), Postives = 145/219 (66.21%), Query Frame = 1 Query: 109 SQSQAYVFYKLLQVPILNFYNLRPVLQYHGTSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLVPQEWRNRANQHCMAQNKDLIKRDSYEKNGLTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSLNYEDKKDSYI-DRSLVQVNNKEEYYSNYNRKKVKLLAMLGSISINNYIGEDDIMDMEKFLYRKYFDW 762 S SQAYVFYKL Q PI++FY LR + +Y+GT FLK +K++F GIF+ +LRH L ++ N K L GHYQY+LS+I+W+ L+P++WR N+ M NKDL K +SYEK+ L +++KQ F+ L NQK NF K+Y YDL SYKS+N E KK SYI S ++ N ++ NYN+KK L L I IN+Y+ DIM M+K RKYFDW Sbjct: 1177 SLSQAYVFYKLSQTPIIHFYKLRDIFEYNGTPFFLKTAMKNYFLTQGIFHSELRHTKLSSYETNQWKSWLRGHYQYNLSQIRWSGLIPKKWRTTINEGGMTPNKDLTKCNSYEKDRLLYHKKQKDFKVYPLPNQKDNFLKYYIYDLFSYKSINSEIKKSSYIFFGSPSELKNNQKIAFNYNKKKQNLSENLEEIPINHYLETGDIMYMKKNPDRKYFDW 1395
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_LACSA (Putative membrane protein ycf1 OS=Lactuca sativa GN=ycf1 PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 6.717e-52 Identity = 119/255 (46.67%), Postives = 156/255 (61.18%), Query Frame = 1 Query: 1 ERINKTNKNRI----ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPILNFYNLRPVLQYHGTSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLVPQEWRNRANQHCMAQNKDLIKRDSYEKNGLTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSLNYEDKKDSYIDRSLVQVNNKEEYYSNYNRKKVKLLAMLGSISINNYIGEDDIMDMEKFLYRKY 753 ERINKT +N+I TI+ SQ YVF+KL Q I+NF LR +LQY+G S LK EIKDFF + GIF+ +LRH L N+G N K+ L GHYQYDLS+I +RL+PQ+WRNR NQ +QNKDL K S EK+ L +K+ + LL N++ N KK+YRYDLLSYK ++ E KK+ YI RS ++ NN +E N R K K ++L +I NY+G+ DI+ MEK RK+ Sbjct: 1048 ERINKTKQNKIDFILSMTIKRAFDNLRNSKRKSDIFFDLSYLSQKYVFFKLSQTQIINFNKLRSILQYNGPSFCLKTEIKDFFGRQGIFHSELRHNKLPNYGMNPWKNWLRGHYQYDLSQITSSRLIPQKWRNRINQCQTSQNKDLNKWYSSEKDQLLDSKKKQNSKVYLLPNKEDNLKKNYRYDLLSYKYIHSETKKNYYIYRSSLETNNNQE---NSTRNKEKFFSILKNIPSKNYLGKSDIIYMEKNKDRKF 1299
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_DRIGR (Putative membrane protein ycf1 OS=Drimys granadensis GN=ycf1 PE=3 SV=1) HSP 1 Score: 201.06 bits (510), Expect = 5.687e-51 Identity = 125/261 (47.89%), Postives = 160/261 (61.30%), Query Frame = 1 Query: 1 ERINKTNKNRI--ISTIQXXXXXXXXXXXXXX--CNLLSFSQSQAYVFYKLLQ-VPILNFYNLRPVLQYHGTSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLVPQEWRNRANQHCMAQNKDLIKRDSYEK--NGLTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSLNYEDKKDSYIDRSLVQVNNKEEYYSNYNRKKVKLLAMLGSISINNYIGEDDIMDMEKFLYRKYFDW 762 E I++TN+N+I ISTIQ C+L SF SQAYVFYKL Q ++N Y+L VLQYHG S F+K+ IKD GIF+ + RHK L N N K+ L HYQY+LS+ +W+RLV ++WR R NQ QNKD DSYEK + HYEK++ + L +QK FKKHYRYDLLSYK +NYED+K SYI S +Q+N E N N K + +LG I+I++Y+GE+ IMD K KYF W Sbjct: 1141 EGIDETNQNKIQFISTIQKSLSILNIRNNNSHIYCDL-SFL-SQAYVFYKLSQNQEVINKYHLISVLQYHGASPFIKHRIKDC--TRGIFDSKSRHKKLPNSRMNEWKNWLKRHYQYNLSQNRWSRLVSKKWRTRVNQRRTIQNKDSKNLDSYEKEKDQFIHYEKENDCAVNSLPSQKEKFKKHYRYDLLSYKYINYEDRKSSYIYVSPLQINGGREIPYNDNTPKPESCYVLGDIAISDYLGEESIMDTGKNPDIKYFKW 1397
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_IPOPU (Putative membrane protein ycf1 OS=Ipomoea purpurea GN=ycf1-A PE=3 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.267e-50 Identity = 119/259 (45.95%), Postives = 157/259 (60.62%), Query Frame = 1 Query: 7 INKTNKNRI--ISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPILNFYNLRPVLQYHGTSLFLKNEIKDFFEKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLV--PQEWRNRANQHCMAQNKDLIKRDSYEKNGLTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSLNYEDKKDSYIDRSLVQVNNKEEYYSNYNRKKVKLLAMLGSISINNYIGEDD---IMDMEKFLYRKYFDW 762 INK KN I IS I+ C+L + SQ AYVFYK+ Q ++N LR VLQ+HGTS FLK ++KD F GIF ++ HK L + K+ L G+YQYDLS+I W+ L+ Q+WRNR N++C +Q KDL K +S K L+HY+K+ + L NQK NF+K YRYDLLSYKS+N E+K DS RS+ QV ++ NYN + L A+ GSI IN +IG + I +EK L RKYF+W Sbjct: 1270 INKKTKNTIHFISNIKTYTYNSCKKNSEIFCDLSNLSQ--AYVFYKISQTGVVNLSKLRSVLQHHGTSFFLKTQMKDSFRTQGIFQSEVIHKKLQRSITSQWKNWLRGNYQYDLSQIIWSSLMSQKQKWRNRVNRYCRSQKKDLKKWNSCGKYQLSHYKKKK--GPNSLSNQKDNFQKCYRYDLLSYKSINNENKGDSVFYRSIPQVTKRQAVSDNYNMSQNSLFAITGSIPINIFIGRIERVYIPYIEKNLNRKYFNW 1524
BLAST of CX069843 vs. ExPASy Swiss-Prot
Match: YCF1_MORIN (Putative membrane protein ycf1 OS=Morus indica GN=ycf1 PE=3 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.686e-50 Identity = 124/262 (47.33%), Postives = 156/262 (59.54%), Query Frame = 1 Query: 1 ERINKTNKN--RIISTIQXXXXXXXXXXXXXXCNLLSFSQSQAYVFYKLLQVPILNFYNL-----RPVLQYHGTSLFLKNEIKDFF-EKHGIFNYQLRHKPLWNFGRNTRKHCLSGHYQYDLSRIKWARLVPQEWRNRANQHCMAQNKDLIKRDSYEKNGLTHYEKQHFFEADLLRNQKSNFKKHYRYDLLSYKSLNYEDKKDSYIDRSLVQVNNKEEYYSNYNRKKVKLLAMLGSISINNYIGEDDIMDMEKFLYRKYFDW 762 E+I+KTN+ + ISTI+ CNL SQ AYVFYKL Q NF+NL R V QY+G LFLKNEIKD+F IF+ +LRHK + N+ N K+CL G+YQ +LS+ +RLVPQ+ N NQH +AQN L K DSYEKN L+ ++K N KK YRYDLLSY +NYEDKK+S I +QVNN +E + NY K KL ML I INNY+ ED+I+D++ RK FDW Sbjct: 1169 EKIDKTNQKITQFISTIKESLSNINNKNLETFCNLSYLSQ--AYVFYKLSQSRGFNFFNLYKLRLRSVFQYNGAFLFLKNEIKDYFLGTQKIFHSELRHKNIPNYEINQWKNCLRGYYQNNLSQ---SRLVPQKGINIVNQHSIAQNNHLNKYDSYEKN-------------PLINSEKKNVKKKYRYDLLSYNFINYEDKKNSSIYGLPLQVNNNQEIFYNYTEHKRKLFNMLVGIPINNYLVEDNIIDIKNNPDRKNFDW 1412 The following BLAST results are available for this feature:
BLAST of CX069843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX069843 ID=CX069843; Name=CX069843; organism=Citrus sinensis; type=EST; length=763bpback to top |