DN621538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_HAHCH (3-isopropylmalate dehydrogenase OS=Hahella chejuensis (strain KCTC 2396) GN=leuB PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 1.964e-54 Identity = 101/179 (56.42%), Postives = 135/179 (75.42%), Query Frame = 1 Query: 136 ITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 + +LPGDGIGPE++A A+NVL + + + F E +GG+A+D GVP PEETLA A+ +DA+LLGA+GG KWDK + ++PE GLL +R GL++FANLRPA + PQL ++S+L+ EV G+D+++VRELTGGIYFGKPRG E+GE GFNT VY+ E+ RI RVAFE A+KR Sbjct: 5 VLILPGDGIGPEIVAQARNVLDVVNNKFSLGLTFTEGLVGGAAIDTTGVPFPEETLATAEAADAILLGAVGGPKWDKLDMAIRPEKGLLGLRSGLELFANLRPAILYPQLAEASSLRPEVVAGLDILIVRELTGGIYFGKPRGVRTLENGEREGFNTYVYSESEIRRIGRVAFEAAQKR 183
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_SYNSC (3-isopropylmalate dehydrogenase OS=Synechococcus sp. (strain CC9605) GN=leuB PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 2.836e-53 Identity = 104/182 (57.14%), Postives = 137/182 (75.27%), Query Frame = 1 Query: 127 RYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 ++ + LLPGDGIGPE+ AVA+ +L++ G +F+E P+GGSA+D G PLP TL A K +DAVLL AIG +D + +PETGLL +R G+++FANLRP ++P L+D+S+LK+EV EGVDLMVVRELTGGIYFG+P+G TE G+E GFNT Y+A EVDRIA+VAFE A++R Sbjct: 3 QHRVVLLPGDGIGPEITAVARQLLEVVSRRHGFSLSFEEQPIGGSAIDATGEPLPASTLDACKAADAVLLAAIGSPCFDSLPREKRPETGLLGLRAGMELFANLRPVKIVPALIDASSLKREVIEGVDLMVVRELTGGIYFGQPKGRIETE-GDERGFNTMTYSASEVDRIAKVAFEIAQER 183
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_SPIPL (3-isopropylmalate dehydrogenase OS=Spirulina platensis GN=leuB PE=3 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 2.836e-53 Identity = 106/183 (57.92%), Postives = 130/183 (71.04%), Query Frame = 1 Query: 124 KRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 + Y ITLL GDGIGPE++AVA +VLK G + F F+E MGG A+D G PLPEE+L A + SDAVLL AIGGYKWD + +PETGLL +R GL +FAN P ++D+S+LK+EV EGVD+MVVRELTGGIYFG+P+G TE G+ G NT Y E+DRI RV FETA+KR Sbjct: 3 QNYRITLLSGDGIGPEIMAVAVDVLKAVGKQLDLNFEFKEALMGGVAIDATGEPLPEESLQACRDSDAVLLAAIGGYKWDNLPRPERPETGLLALRAGLGLFANRARLLFCPHVLDASSLKREVVEGVDIMVVRELTGGIYFGQPKGIFETETGKNEGSNTMAYGESEIDRIGRVGFETAKKR 185
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_SYNS9 (3-isopropylmalate dehydrogenase OS=Synechococcus sp. (strain CC9902) GN=leuB PE=3 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 6.318e-53 Identity = 102/182 (56.04%), Postives = 134/182 (73.63%), Query Frame = 1 Query: 127 RYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 +Y + LLPGDGIGPE+ AVA+ +L + G + F+E P+GGSA+D G PLP TL A + +DAVLL AIG ++D + +PETGLL +R GL++FANLRP ++P L+ +S+LK+EV EGVDLMVVRELTGGIYFG+P+G + G+E GFNT Y+A EVDRIA+VAFE A +R Sbjct: 3 QYRVVLLPGDGIGPEITAVARQLLDVVAQRHGFQLMFEEQPIGGSAIDATGEPLPASTLTACRSADAVLLAAIGSPRFDSLPREKRPETGLLGLRSGLELFANLRPVKIVPALIGASSLKQEVIEGVDLMVVRELTGGIYFGQPKG-RIEADGDERGFNTMTYSASEVDRIAKVAFEIAGER 183
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_PROMM (3-isopropylmalate dehydrogenase OS=Prochlorococcus marinus (strain MIT 9313) GN=leuB PE=3 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.556e-51 Identity = 104/183 (56.83%), Postives = 132/183 (72.13%), Query Frame = 1 Query: 124 KRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 +++ I LLPGDGIGPE+ AVAK +L G G + F++ P+GG A+D G PLP TL A + SDAVLL AIG ++D + +PETGLL +R GLK+FANLRP T+LP L+D+S+LK V +GVDLMVVRELTGGIYFG+P+G + G+E FNT Y+ EVDRIA+VAFE AR R Sbjct: 2 RQHRIVLLPGDGIGPEITAVAKLLLDALGHQHGFKLNFEQHPIGGVAIDASGSPLPASTLEACQASDAVLLAAIGSPRFDALPREQRPETGLLSLRAGLKLFANLRPVTILPALIDASSLKANVIKGVDLMVVRELTGGIYFGQPKG-RIEADGDERAFNTMTYSRTEVDRIAKVAFELARDR 183
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_THICR (3-isopropylmalate dehydrogenase OS=Thiomicrospira crunogena (strain XCL-2) GN=leuB PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.833e-50 Identity = 96/179 (53.63%), Postives = 129/179 (72.07%), Query Frame = 1 Query: 136 ITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 + +LPGDGIGPE+ A A VL+ + ++ + +GG+A D GVPL EETL AKQSDA+LLGA+GGY+W+ + ++PE GLL +R L++FANLRPA + PQL D+STLK EV G+D+++VRELTGGIYFG+PRG ++GE G+NT VY+ E+ RIA VAF+ A KR Sbjct: 5 VLILPGDGIGPEITAEAVKVLEALQQKDNLDISMTHDLVGGAAYDQHGVPLAEETLEKAKQSDAILLGAVGGYQWESLDISVRPEKGLLALRSNLELFANLRPAYLFPQLADASTLKPEVVAGLDILIVRELTGGIYFGQPRGIRTLDNGERQGYNTYVYSESEIKRIAHVAFDAAMKR 183
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_SYNPX (3-isopropylmalate dehydrogenase OS=Synechococcus sp. (strain WH8102) GN=leuB PE=3 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.833e-50 Identity = 100/182 (54.95%), Postives = 130/182 (71.43%), Query Frame = 1 Query: 127 RYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 ++ + LLPGDGIGPE+ AVA+ +L+ G E F +GGSA+D G PLP TL A K +DAVLL AIG ++D + +PETGLL +R G+ +FANLRP ++P L+ +S+L+ EV EGVDLMVVRELTGGIYFG+P+G + GEE GFNT Y++ EVDRIARVAF+ AR+R Sbjct: 3 QHRVVLLPGDGIGPEITAVARQLLEAVSQRHGFELCFDGQLIGGSAIDACGEPLPASTLDACKAADAVLLAAIGSPRFDNLPRDKRPETGLLGLRSGMALFANLRPVKIVPALIGASSLRPEVIEGVDLMVVRELTGGIYFGQPKG-RIQADGEERGFNTMTYSSSEVDRIARVAFDLARER 183
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_SACD2 (3-isopropylmalate dehydrogenase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=leuB PE=3 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 6.538e-50 Identity = 94/179 (52.51%), Postives = 132/179 (73.74%), Query Frame = 1 Query: 136 ITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 I LLPGDGIGPE++A AK VL+ + + F+E +GG A+D+ GVPL + TL K +DAVL+G++GG KWD + +++PE GLL+IR + ++ANLRPA + PQL D+S+LK E+ G+D+++VRELTGGIYFG+PRG + ++GE G+NT VYA +E++RI R AFE A KR Sbjct: 5 IVLLPGDGIGPEIVAEAKKVLEAVDAKFKLGLKFEEDLIGGCAIDVHGVPLAQSTLDRCKAADAVLMGSVGGPKWDALDSNIRPEKGLLKIRYEMGLYANLRPAILYPQLADASSLKPEIVSGLDILIVRELTGGIYFGEPRGIRLLDNGERQGYNTYVYAEHEIERIGRTAFEMAMKR 183
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_NITOC (3-isopropylmalate dehydrogenase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=leuB PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 7.228e-49 Identity = 101/179 (56.42%), Postives = 125/179 (69.83%), Query Frame = 1 Query: 136 ITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 I LL GDGIGPE+IA A VL G ++ + +GG+A ++ G PLP ETLA A+ SDA+LLGA+GG +W+ + ++PE GLL IR L +FANLRPA + PQLV +STLK EV G+DLM+VRELTGGIYFG+PRG EHGE GFNT VY E+ RIA+VAF A KR Sbjct: 5 IALLAGDGIGPEIIAEAVKVLAALGEHGELDVVLESGLIGGAAYEVTGTPLPAETLALAQDSDAILLGAVGGPQWETLDIKVRPEKGLLGIRSALGLFANLRPAILYPQLVGASTLKPEVVSGLDLMIVRELTGGIYFGQPRGVCRLEHGERQGFNTLVYKESEIRRIAQVAFTIAMKR 183
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_GLOVI (3-isopropylmalate dehydrogenase OS=Gloeobacter violaceus GN=leuB PE=3 SV=1) HSP 1 Score: 193.741 bits (491), Expect = 7.228e-49 Identity = 98/182 (53.85%), Postives = 124/182 (68.13%), Query Frame = 1 Query: 127 RYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 RY I +LPGDGIG E++ V +L+ A F F+E P+GG+A+D G PLP TL K SDAV LGA+GG +WD +PE LL +R GL +FANLRPA +LPQLV +S LK EV EGVD++VVRELTGG+YFG P+G + G G NT Y+A+E++RI RVAFE AR+R Sbjct: 4 RYKIAVLPGDGIGTEIVQVGVAMLEAAARRFDFAFDFEEAPIGGAAIDATGEPLPAATLELCKASDAVFLGAVGGPQWDTLPSDKRPEKALLGLRAGLGLFANLRPARILPQLVAASALKPEVVEGVDILVVRELTGGLYFGIPKGIFPEKKGGRRGVNTMSYSAFEIERIGRVAFEAARER 185 The following BLAST results are available for this feature:
BLAST of DN621538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 292
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621538 ID=DN621538; Name=DN621538; organism=Citrus sinensis; type=EST; length=674bpback to top |