DN621538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_BRANA (3-isopropylmalate dehydrogenase, chloroplastic OS=Brassica napus PE=2 SV=1) HSP 1 Score: 325.479 bits (833), Expect = 1.592e-88 Identity = 167/225 (74.22%), Postives = 193/225 (85.78%), Query Frame = 1 Query: 1 AASVQLNAKLLGPAFIVKPATKHFLK-PARIRCXXXXXXXXXKRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 AA++Q N + + ++ TK P R+RC KRY+ITLLPGDGIGPEVI++AKNVL+ AGSLEG+EF+FQEMP+GG+ALDLVGVPLPEET++AAK+SDAVLLGAIGGYKWDKNEKHLKPETGLLQ+R GLKVFANLRPATVLPQLVD+STLK+EVAEGVDLMVVRELTGGIYFG PRG E+GEE+G+NTEVYAA+E+DRIARVAFETARKR Sbjct: 2 AAALQTNIRPVKFPATLRALTKQSSPAPFRVRCAAASPGK--KRYNITLLPGDGIGPEVISIAKNVLQQAGSLEGLEFSFQEMPVGGAALDLVGVPLPEETVSAAKESDAVLLGAIGGYKWDKNEKHLKPETGLLQLRAGLKVFANLRPATVLPQLVDASTLKREVAEGVDLMVVRELTGGIYFGVPRGIKTNENGEEVGYNTEVYAAHEIDRIARVAFETARKR 224
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU32_ARATH (3-isopropylmalate dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=IMDH2 PE=2 SV=1) HSP 1 Score: 325.094 bits (832), Expect = 2.079e-88 Identity = 163/224 (72.77%), Postives = 190/224 (84.82%), Query Frame = 1 Query: 1 AASVQLNAKLLGPAFIVKPATKHFLKPARIRCXXXXXXXXXKRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 AA++Q N + + + +K L P R+RC KRY+ITLLPGDGIGPEV+++AKNVL+ AGSLEG+EF F+EMP+GG+ALDLVGVPLPEET++AAK+SDAVLLGAIGGYKWD NEKHL+PE GLLQIR LKVFANLRPATVLPQLVD+STLK+EVAEGVDLMVVRELTGGIYFG+PRG E+GEE+GFNTEVYAA+E+DRIARVAFETARKR Sbjct: 2 AAALQTNIRTVKVPATFRAVSKQSLAPFRVRCAVASPGK--KRYTITLLPGDGIGPEVVSIAKNVLQQAGSLEGVEFNFREMPIGGAALDLVGVPLPEETISAAKESDAVLLGAIGGYKWDNNEKHLRPEKGLLQIRAALKVFANLRPATVLPQLVDASTLKREVAEGVDLMVVRELTGGIYFGEPRGIKTNENGEEVGFNTEVYAAHEIDRIARVAFETARKR 223
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU31_ARATH (3-isopropylmalate dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=IMDH1 PE=1 SV=2) HSP 1 Score: 314.694 bits (805), Expect = 2.810e-85 Identity = 162/225 (72.00%), Postives = 184/225 (81.78%), Query Frame = 1 Query: 1 AASVQLNAKL-LGPAFIVKPATKHFLKPARIRCXXXXXXXXXKRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 AA +Q N +L + P F P RIRC KRY+ITLLPGDGIGPEVI+VAKNVL+ AG L+G+EF FQEMP GG+ALDLVGVPLPEET AAKQSDA+LLGAIGGYKWDKNEKHL+PE GLL IR L VFANLRPATVLPQLVD+STLKKEVA+GVD+M+VRELTGGIYFG+PRG + E+GEE+GFNTE+YAA+E+DRIARVAFETARKR Sbjct: 2 AAFLQTNIRLEIIPGRYSSLTDHKFRAPYRIRCAAASPVK--KRYNITLLPGDGIGPEVISVAKNVLQKAGFLQGLEFDFQEMPFGGAALDLVGVPLPEETSTAAKQSDAILLGAIGGYKWDKNEKHLRPEMGLLNIRRDLNVFANLRPATVLPQLVDASTLKKEVAQGVDMMIVRELTGGIYFGEPRGITINENGEEVGFNTEIYAAHEIDRIARVAFETARKR 224
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU33_ARATH (3-isopropylmalate dehydrogenase 3, chloroplastic OS=Arabidopsis thaliana GN=IMDH3 PE=1 SV=1) HSP 1 Score: 308.531 bits (789), Expect = 2.014e-83 Identity = 156/222 (70.27%), Postives = 180/222 (81.08%), Query Frame = 1 Query: 7 SVQLNAKLLGPAFIVKPATKHFLKPARIRCXXXXXXXXXKRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 ++ LNA + P F P RIRC KRY+I LLPGDGIGPEVI+VAKNVL+ AGSLEG+EF F+EMP+GG+ALDLVGVPLPEET AAK SDA+LLGAIGGYKWDKNEKHL+PE L +R LKVFANLRPATVLPQLVD+STLKKEVAEGVD+M+VRELTGGIYFG+PRG + E+GEE+G +TE+YAA+E+DRIARVAFETARKR Sbjct: 8 NISLNAIKIVPGKYSSLTDHQFRAPYRIRCAAASPGK--KRYNIALLPGDGIGPEVISVAKNVLQKAGSLEGLEFDFKEMPVGGAALDLVGVPLPEETFTAAKLSDAILLGAIGGYKWDKNEKHLRPEMALFYLRRDLKVFANLRPATVLPQLVDASTLKKEVAEGVDMMIVRELTGGIYFGEPRGITINENGEEVGVSTEIYAAHEIDRIARVAFETARKR 227
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_ANAVT (3-isopropylmalate dehydrogenase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=leuB PE=3 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 3.023e-63 Identity = 120/183 (65.57%), Postives = 142/183 (77.60%), Query Frame = 1 Query: 124 KRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 + Y ITLLPGDGIGPE++AVA +VLK+ G I+F FQE +GG+A+D G PLP TL +QSDAVLL AIGGYKWD H +PE GLL +R GL++FANLRPA +LPQL+D+STLK+EV EGVD+MVVRELTGGIYFGKPRG TE GE+ G NT VY E+DRI R+AFETARKR Sbjct: 3 QNYRITLLPGDGIGPEIMAVAVDVLKVVGQQFDIQFDFQEALIGGAAIDATGEPLPSATLDTCRQSDAVLLAAIGGYKWDSLPPHQRPEGGLLGLRAGLELFANLRPAQILPQLIDASTLKREVVEGVDIMVVRELTGGIYFGKPRGIFTTETGEKRGVNTMVYTESEIDRIGRIAFETARKR 185
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_ANASP (3-isopropylmalate dehydrogenase OS=Anabaena sp. (strain PCC 7120) GN=leuB PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.149e-62 Identity = 119/183 (65.03%), Postives = 141/183 (77.05%), Query Frame = 1 Query: 124 KRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 + Y ITLLPGDGIGPE++AVA +VLK+ G I+F FQE +GG+A+D G PLP TL + SDAVLL AIGGYKWD H +PE GLL +R GL++FANLRPA +LPQL+D+STLK+EV EGVD+MVVRELTGGIYFGKPRG TE GE+ G NT VY E+DRI R+AFETARKR Sbjct: 3 QNYRITLLPGDGIGPEIMAVAVDVLKVVGQQFDIQFDFQEALIGGAAIDATGEPLPSATLDTCRHSDAVLLAAIGGYKWDSLPPHQRPEGGLLGLRAGLELFANLRPAQILPQLIDASTLKREVVEGVDIMVVRELTGGIYFGKPRGIFTTETGEKRGVNTMVYTESEIDRIGRIAFETARKR 185
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_SYNY3 (3-isopropylmalate dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=leuB PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.659e-61 Identity = 119/181 (65.75%), Postives = 139/181 (76.80%), Query Frame = 1 Query: 130 YSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 Y++TLLPGDGIGPE++AVA VL G F FQE +GG+A+D G PLPE TLA AK SDAVLL AIGGY WD + +PETGLL IREGL +FANLRPAT+ PQL+D+S+LK+EV EGVD+MVVRELTGGIYFGKP+G TE GE+ G NT Y E+DRIA+VAFETARKR Sbjct: 5 YNVTLLPGDGIGPEIMAVAVAVLGKVADQFGFAFNFQEALIGGAAIDATGQPLPEATLAQAKDSDAVLLAAIGGYAWDNLPRSQRPETGLLAIREGLGLFANLRPATIFPQLIDASSLKREVVEGVDIMVVRELTGGIYFGKPKGIFETETGEKRGVNTMAYTVGEIDRIAKVAFETARKR 185
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_SYNP6 (3-isopropylmalate dehydrogenase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=leuB PE=3 SV=2) HSP 1 Score: 227.254 bits (578), Expect = 5.899e-59 Identity = 113/183 (61.75%), Postives = 137/183 (74.86%), Query Frame = 1 Query: 124 KRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 + Y ITLLPGDGIGPE++AV ++L+ G + F F+E +GGSA+D G PLPE TLA + SDAVLL AIGGYKWD + +PETGLL +R GL +FANLRPA +LPQLVD+S+LK+EV EGVDLMVVRELTGGIYFG+P+G E G + FNT VY E+DRI RVAF+ ARKR Sbjct: 3 RSYRITLLPGDGIGPEIMAVTVDILRAIGRQFDLNFEFEEALIGGSAIDATGEPLPEATLATCRNSDAVLLAAIGGYKWDSLPRSQRPETGLLGLRAGLGLFANLRPAAILPQLVDASSLKREVIEGVDLMVVRELTGGIYFGEPKGCFADEQGRQRAFNTMVYREDEIDRIGRVAFDIARKR 185
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_SYNE7 (3-isopropylmalate dehydrogenase OS=Synechococcus elongatus (strain PCC 7942) GN=leuB PE=3 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 5.899e-59 Identity = 113/183 (61.75%), Postives = 137/183 (74.86%), Query Frame = 1 Query: 124 KRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 + Y ITLLPGDGIGPE++AV ++L+ G + F F+E +GGSA+D G PLPE TLA + SDAVLL AIGGYKWD + +PETGLL +R GL +FANLRPA +LPQLVD+S+LK+EV EGVDLMVVRELTGGIYFG+P+G E G + FNT VY E+DRI RVAF+ ARKR Sbjct: 3 RSYRITLLPGDGIGPEIMAVTVDILRAIGRQFDLNFEFEEALIGGSAIDATGEPLPEATLATCRNSDAVLLAAIGGYKWDSLPRSQRPETGLLGLRAGLGLFANLRPAAILPQLVDASSLKREVIEGVDLMVVRELTGGIYFGEPKGCFADEQGRQRAFNTMVYREDEIDRIGRVAFDIARKR 185
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_THEEB (3-isopropylmalate dehydrogenase OS=Thermosynechococcus elongatus (strain BP-1) GN=leuB PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.230e-56 Identity = 112/181 (61.88%), Postives = 133/181 (73.48%), Query Frame = 1 Query: 130 YSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 Y I +L GDGIGPE+ AVA +VL+ G++F F +GG A+D VG PLP TLA +QSDAVLL AIGG +WD +HL+PETGLL +R GL +FANLRPA + PQL+ +S+LK EV GVDLMVVRELTGGIYFG+PRG TE GE+ G NT Y A E+DRI RVAFETARKR Sbjct: 5 YRIAVLAGDGIGPEITAVALDVLRAIAPRFGLDFDFVPALVGGCAIDAVGEPLPAATLATCRQSDAVLLAAIGGTQWDSLPRHLRPETGLLALRSGLGLFANLRPAKIFPQLLHASSLKPEVIAGVDLMVVRELTGGIYFGQPRGIFTTETGEQRGVNTMAYTATEIDRIGRVAFETARKR 185 The following BLAST results are available for this feature:
BLAST of DN621538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 292
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Sequences
The
following sequences are available for this feature:
EST sequence >DN621538 ID=DN621538; Name=DN621538; organism=Citrus sinensis; type=EST; length=674bpback to top |