DN621538

Overview
NameDN621538
Unique NameDN621538
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_BACC1 (3-isopropylmalate dehydrogenase OS=Bacillus cereus (strain ATCC 10987) GN=leuB PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 9.792e-38
Identity = 89/179 (49.72%), Postives = 114/179 (63.69%), Query Frame = 1
Query:  136 ITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            I  L GDG+GPEV+  AK VL +   L G  F  Q+   GGSA+DL G PLP+ TLAA   SDAVLLGA+GG +WD  ++  +PE GLL +R+GL VFAN+RP TV       S LKK  A+ +D +VVRELTGGIYF  P+     E  +E+  +T  Y  +E++RI   AF+ A KR
Sbjct:    5 IVCLAGDGVGPEVMESAKEVLHMVERLYGHHFHLQDEYFGGSAIDLNGQPLPQRTLAACLASDAVLLGAVGGPRWDSAKE--RPEKGLLALRKGLGVFANVRPVTVESATAHLSPLKK--ADEIDFVVVRELTGGIYFSYPK-----ERTDEVATDTLTYHRHEIERIVSYAFQLASKR 174          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_PASMU (3-isopropylmalate dehydrogenase OS=Pasteurella multocida GN=leuB PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.279e-37
Identity = 86/183 (46.99%), Postives = 118/183 (64.48%), Query Frame = 1
Query:  130 YSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETG-LLQIREGLKVFANLRPATVLPQLVDSSTLKKEV-AEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            ++I +L GDGIGPE+IA A  VL +       +  ++   +GG A+D  G PLPE TL   ++SDA+L G++GG KW+      +PE G LL +R+   +F NLRPAT+   L     L+ ++ A+G D++ VRELTGGIYFG+P+G    E   E  F+TEVY  YE++RIARVAFETA KR
Sbjct:    4 FNIAVLSGDGIGPEIIAEAIKVLDVVQQKYAFKLNYRTFDVGGIAIDNHGTPLPEATLKGCEESDAILFGSVGGPKWEHLPPAQQPERGALLPLRKHFALFCNLRPATLYKGLEKFCPLRADISAKGFDMVTVRELTGGIYFGQPKG-REGEGANEKAFDTEVYHRYEIERIARVAFETAMKR 185          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_BUCUO (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Uroleucon obscurum GN=leuB PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.279e-37
Identity = 80/184 (43.48%), Postives = 120/184 (65.22%), Query Frame = 1
Query:  127 RYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPE-TGLLQIREGLKVFANLRPATVLPQLVDSSTLKKE-VAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            +Y I +LPGDGIGPEV+  A  +LK+  +   + F  +E  +GG A+D  G+ LP++TL   ++SDA+L G++GG KWD      +PE   LL +R+   +FANLRPA +  +L   S L+   V +G D++ +RELTGGIYFG+P G  + ++  E  F+TE+Y  YE++RIA +AF+ A+ R
Sbjct:    4 QYRIAVLPGDGIGPEVMREAYKILKILKNNFLLSFEIEEFNVGGIAIDQEGLALPKKTLLGCEKSDAILFGSVGGKKWDNFPIEERPERAALLPLRKHFNLFANLRPAKIYSELKHLSPLRSNIVRDGFDILCIRELTGGIYFGQPSGRRLEKNNIEYAFDTEIYYDYEINRIAHLAFQLAQSR 187          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_BACCZ (3-isopropylmalate dehydrogenase OS=Bacillus cereus (strain ZK / E33L) GN=leuB PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.279e-37
Identity = 88/179 (49.16%), Postives = 114/179 (63.69%), Query Frame = 1
Query:  136 ITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            I  L GDG+GPEV+  AK VL +   L G  F  Q+   GG A+DL G PLP+ TLAA   SDAVLLGA+GG +WD  ++  +PE GLL +R+GL VFAN+RP TV  +    S LKK  A+ +D +VVRELTGGIYF  P+     E  +E+  +T  Y  +E++RI   AF+ A KR
Sbjct:    5 IVCLAGDGVGPEVMESAKEVLHMVERLYGHHFHLQDEHFGGVAIDLTGQPLPQRTLAACLASDAVLLGAVGGPRWDGAKE--RPEKGLLALRKGLGVFANVRPVTVESETAHLSPLKK--ADEIDFVVVRELTGGIYFSYPK-----ERTDEVATDTLTYHRHEIERIVSYAFQLASKR 174          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_RHOBA (3-isopropylmalate dehydrogenase OS=Rhodopirellula baltica GN=leuB PE=3 SV=2)

HSP 1 Score: 155.992 bits (393), Expect = 1.670e-37
Identity = 83/180 (46.11%), Postives = 112/180 (62.22%), Query Frame = 1
Query:  133 SITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            SI LLPGDGIGPE++  A+ VL       G  F F    +GG A+D  G PLP+ T+ A + + A+LLGA+GG KWD      +PE GLL+IR+ L +FANLRP  +  +L D+S L+ ++ +G D++  RELTGGIYFG+    G  E  EE  F +  Y+  EV RI R+A + AR R
Sbjct:    4 SIVLLPGDGIGPEIVEQARLVLVKVAERFGHTFDFSSHQIGGIAIDETGDPLPQPTIDACRNAAAILLGAVGGPKWDDPSAKTRPEAGLLKIRKELGLFANLRPIKLFDELADASPLRADIVKGTDILFFRELTGGIYFGESGTSGSGE--EETAFQSMTYSVGEVKRIVRMAAQAARGR 181          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_DEHE1 (3-isopropylmalate dehydrogenase OS=Dehalococcoides ethenogenes (strain 195) GN=leuB PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 1.670e-37
Identity = 81/181 (44.75%), Postives = 111/181 (61.33%), Query Frame = 1
Query:  130 YSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            + +T+LPGDGIGPEV+A    VL          F +Q   +GG  +D  GV L  ETLA  K+SDAVLL A+G  ++D  +  + PE GLL +R GL +FAN+RP  V P LV+S+ +K E+ +G D + +RELTGG+YF KP+    T  G     ++  Y+  E++RI RV FE AR R
Sbjct:    3 FKLTVLPGDGIGPEVMAEGLKVLNAVAKKYKHSFEYQYGLIGGCCIDKEGVALSPETLAMCKKSDAVLLAAVGDPRFDDPKLPVHPEDGLLALRRGLGLFANIRPVKVAPSLVNSAPIKAEIVKGTDFIFIRELTGGVYFAKPKKRWTTPSGIRKATDSMTYSEKEIERIVRVGFELARSR 183          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_BUCRP (3-isopropylmalate dehydrogenase OS=Buchnera aphidicola subsp. Rhopalosiphum padi GN=leuB PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.849e-37
Identity = 82/185 (44.32%), Postives = 115/185 (62.16%), Query Frame = 1
Query:  124 KRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPE-TGLLQIREGLKVFANLRPATVLPQLVDSSTLKKE-VAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            K++ I +LPGDGIGPE++  A  +L +      +    +E  +GG A+D  G+ LPEETL   + SDA+L G++GG KWD      +PE   LL +R+   +F+NLRPA +   L + S L+   V  G D++ VRELTGGIYFGKP+G    E+G E  F+TE+Y  +E+ RIA +AFE A  R
Sbjct:    3 KKFRIAVLPGDGIGPEIMREAYKILNILEKNFSLPLEIREFSVGGIAIDREGIALPEETLRGCENSDAILFGSVGGKKWDYLPIESRPERASLLPLRKHFNLFSNLRPAKLYSDLKNLSPLRSNIVRNGFDILCVRELTGGIYFGKPKGRSKNENG-EYSFDTEIYYDFEIKRIAHLAFELASSR 186          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_BACCR (3-isopropylmalate dehydrogenase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=leuB PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.849e-37
Identity = 88/179 (49.16%), Postives = 112/179 (62.57%), Query Frame = 1
Query:  136 ITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            I  L GDG+GPEV+  AK VL +   L G  F  Q+   GG A+DL G PLP+ TLAA   SDAVLLGA+GG +WD  ++  +PE GLL +R+GL VFAN+RP TV       S LK   A+ +D +VVRELTGGIYF  P+     E  EE+  +T  Y  +E++RI   AF+ A KR
Sbjct:    5 IVCLAGDGVGPEVMESAKEVLHMVERLYGHHFHLQDEYFGGVAIDLTGQPLPQRTLAACLASDAVLLGAVGGPRWDSAKE--RPEKGLLALRKGLGVFANVRPVTVESATAHLSPLKN--ADEIDFVVVRELTGGIYFSYPK-----ERTEEVATDTLTYHRHEIERIVSYAFQLANKR 174          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_BACAN (3-isopropylmalate dehydrogenase OS=Bacillus anthracis GN=leuB PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.849e-37
Identity = 88/179 (49.16%), Postives = 113/179 (63.13%), Query Frame = 1
Query:  136 ITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            I  L GDG+GPEV+  AK VL +   L G  F  Q+   GG A+DL G PLP+ TLAA   SDAVLLGA+GG +WD  ++  +PE GLL +R+GL VFAN+RP TV       S LKK  A+ +D +VVRELTGGIYF  P+     E  +E+  +T  Y  +E++RI   AF+ A KR
Sbjct:    5 IVCLAGDGVGPEVMESAKEVLHMVERLYGHHFHLQDEHFGGVAIDLTGQPLPQRTLAACLASDAVLLGAVGGPRWDGAKE--RPEKGLLALRKGLGVFANVRPVTVESATAHLSPLKK--ADEIDFVVVRELTGGIYFSYPK-----ERTDEVATDTLTYHRHEIERIVSCAFQLASKR 174          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_SHEON (3-isopropylmalate dehydrogenase OS=Shewanella oneidensis GN=leuB PE=3 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 6.347e-37
Identity = 86/183 (46.99%), Postives = 116/183 (63.39%), Query Frame = 1
Query:  130 YSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETG-LLQIREGLKVFANLRPATVLPQLVDSSTLKKEV-AEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            Y I +L GDGIGPEV+A A+ VLK   +  G+   + E  +GG A+D  G PLPE TL   + +DA+L G++GG KW+K   + +PE G LL +R   ++F NLRPA +   L   S L+ ++ A G D++ VRELTGGIYFGKP+G       EE  F+T  Y+  E+ RIAR+AFE AR R
Sbjct:    3 YQIAVLAGDGIGPEVMAEARKVLKAVEARFGLNIEYTEYDVGGIAIDNHGCPLPEATLKGCEAADAILFGSVGGPKWEKLPPNEQPERGALLPLRGHFELFCNLRPAKLHDGLEHMSPLRSDISARGFDVLCVRELTGGIYFGKPKGRQGEGESEE-AFDTMRYSRREISRIARIAFEAARGR 184          
The following BLAST results are available for this feature:
BLAST of DN621538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 292
Match NameE-valueIdentityDescription
LEU3_BACC19.792e-3849.723-isopropylmalate dehydrogenase OS=Bacillus cereus... [more]
LEU3_PASMU1.279e-3746.993-isopropylmalate dehydrogenase OS=Pasteurella mul... [more]
LEU3_BUCUO1.279e-3743.483-isopropylmalate dehydrogenase OS=Buchnera aphidi... [more]
LEU3_BACCZ1.279e-3749.163-isopropylmalate dehydrogenase OS=Bacillus cereus... [more]
LEU3_RHOBA1.670e-3746.113-isopropylmalate dehydrogenase OS=Rhodopirellula ... [more]
LEU3_DEHE11.670e-3744.753-isopropylmalate dehydrogenase OS=Dehalococcoides... [more]
LEU3_BUCRP2.849e-3744.323-isopropylmalate dehydrogenase OS=Buchnera aphidi... [more]
LEU3_BACCR2.849e-3749.163-isopropylmalate dehydrogenase OS=Bacillus cereus... [more]
LEU3_BACAN2.849e-3749.163-isopropylmalate dehydrogenase OS=Bacillus anthra... [more]
LEU3_SHEON6.347e-3746.993-isopropylmalate dehydrogenase OS=Shewanella onei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06N15_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006N15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621538 ID=DN621538; Name=DN621538; organism=Citrus sinensis; type=EST; length=674bp
GCGGCGTCAGTGCAGCTGAATGCGAAGCTACTTGGACCCGCGTTTATTGT
TAAACCCGCAACCAAACACTTTCTTAAACCGGCAAGAATCAGGTGCGCCG
CTGCTGCCACCGCACCACCCACCAAACGGTACAGCATCACTCTACTCCCC
GGCGATGGCATCGGCCCCGAAGTCATCGCCGTCGCCAAAAACGTCCTCAA
GCTCGCTGGCTCTCTCGAAGGGATTGAATTTGCATTCCAAGAGATGCCAA
TGGGGGGATCAGCCTTGGATTTGGTTGGAGTTCCGTTACCTGAGGAGACA
CTTGCAGCAGCGAAGCAATCTGATGCAGTTCTACTTGGCGCAATTGGAGG
GTATAAATGGGATAAAAATGAGAAACATTTGAAGCCAGAGACTGGATTGC
TTCAGATTCGAGAAGGTCTTAAAGTCTTTGCAAATTTGAGGCCAGCAACT
GTTTTACCACAGTTAGTGGACTCTTCCACTTTGAAGAAGGAGGTTGCTGA
AGGTGTTGACCTTATGGTTGTAAGGGAGCTCACCGGAGGTATTTATTTTG
GAAAGCCCAGGGGCTATGGTGTTACTGAACATGGTGAGGAGATTGGCTTC
AATACAGAGGTTTATGCTGCCTACGAGGTGGATCGTATTGCTCGTGTTGC
TTTTGAGACTGCTCGGAAACGTCA
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