DN621538

Overview
NameDN621538
Unique NameDN621538
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_XANOR (3-isopropylmalate dehydrogenase OS=Xanthomonas oryzae pv. oryzae GN=leuB PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.666e-45
Identity = 93/179 (51.96%), Postives = 124/179 (69.27%), Query Frame = 1
Query:  136 ITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            I +LPGDGIGPE++A A  VL+   +  G+ F      +GG+A D  G PL +ETL  A+ +DAVLLGA+GG +WD  +  L+PE GLL+IR  L +FANLRPA + PQL D+STLK EV  G+DL+++RELTGGIYFG+PRG    ++GE   ++T  Y+  E+ RIA+  FE AR R
Sbjct:    5 ILILPGDGIGPEIMAEAVKVLQRIDTQHGLGFELVYDELGGAAYDKYGSPLADETLERARAADAVLLGAVGGPQWDTIDPSLRPERGLLKIRSQLGLFANLRPALLYPQLADASTLKPEVVAGLDLLILRELTGGIYFGQPRGNRTLDNGERQAYDTLPYSESEICRIAKAGFEMARLR 183          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_XANOM (3-isopropylmalate dehydrogenase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=leuB PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.666e-45
Identity = 93/179 (51.96%), Postives = 124/179 (69.27%), Query Frame = 1
Query:  136 ITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            I +LPGDGIGPE++A A  VL+   +  G+ F      +GG+A D  G PL +ETL  A+ +DAVLLGA+GG +WD  +  L+PE GLL+IR  L +FANLRPA + PQL D+STLK EV  G+DL+++RELTGGIYFG+PRG    ++GE   ++T  Y+  E+ RIA+  FE AR R
Sbjct:    5 ILILPGDGIGPEIMAEAVKVLQRIDTQHGLGFELVYDELGGAAYDKYGSPLADETLERARAADAVLLGAVGGPQWDTIDPSLRPERGLLKIRSQLGLFANLRPALLYPQLADASTLKPEVVAGLDLLILRELTGGIYFGQPRGNRTLDNGERQAYDTLPYSESEICRIAKAGFEMARLR 183          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_XANAC (3-isopropylmalate dehydrogenase OS=Xanthomonas axonopodis pv. citri GN=leuB PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.666e-45
Identity = 93/179 (51.96%), Postives = 124/179 (69.27%), Query Frame = 1
Query:  136 ITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            I +LPGDGIGPE++A A  VLK   +  G+ F      +GG+A D  G PL +ETL  A+ +DAVLLGA+GG +WD  +  L+PE GLL+IR  L +FANLRPA + PQL D+STLK EV  G+DL+++RELTGGIYFG+PRG    ++GE   ++T  Y+  E+ RIA+  F+ AR R
Sbjct:    5 ILILPGDGIGPEIMAEAVKVLKRIDAQHGLGFQLVYDELGGTAYDKYGSPLADETLERARGADAVLLGAVGGPQWDTIDPALRPERGLLKIRSQLGLFANLRPALLYPQLADASTLKPEVVAGLDLLILRELTGGIYFGQPRGNRTLDNGERQAYDTLPYSESEIRRIAKAGFDMARLR 183          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_PELLD (3-isopropylmalate dehydrogenase OS=Pelodictyon luteolum (strain DSM 273) GN=leuB PE=3 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.176e-45
Identity = 97/181 (53.59%), Postives = 121/181 (66.85%), Query Frame = 1
Query:  130 YSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            Y I  +PGDGIGPEV+A A  V++      G E   +E P GG++ DL G  L +ETL A +  DAVLLGA+GG KW+      KPE  LL+IR  L +FANLRPA V   LVD+S+LK +V  G D MV RELTGGIYFG+PRG+      E+ G+NT VY  +EV+RIAR+AFE A+KR
Sbjct:    2 YKIVSIPGDGIGPEVVAGALAVIRQITKKHGFEIQVEEHPFGGASYDLHGSMLTDETLNACRDCDAVLLGAVGGPKWENLPHEHKPEAALLKIRRELGLFANLRPAKVYDALVDASSLKADVVRGTDFMVFRELTGGIYFGEPRGF-----DEKRGWNTMVYEKHEVERIARLAFEAAQKR 177          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_SULDN (3-isopropylmalate dehydrogenase OS=Sulfurimonas denitrificans (strain ATCC 33889 / DSM 1251) GN=leuB PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.842e-45
Identity = 96/183 (52.46%), Postives = 123/183 (67.21%), Query Frame = 1
Query:  124 KRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            K Y I L+ GDGIGPE+I  A  VL    S   +EF+++E  MGG A D+ G PLP+ET+  +  SDAVL GAIGG KWD   +  +PE+GLL+ R+ L V+ANLRPA V  +L+++S+LK EV +GVDLMVVREL GGIYFG+P+G       E  G+NT VY   E+ RIA  AF+ A  R
Sbjct:    2 KTYKIALIKGDGIGPEIIDEAVKVLDAVASCCDLEFSYEEALMGGCAYDITGDPLPQETINISLNSDAVLFGAIGGAKWDNLPREKRPESGLLRFRKELGVYANLRPANVFDELINASSLKAEVIKGVDLMVVRELIGGIYFGEPKG-----RDENRGWNTMVYTREEIVRIAHQAFKIAMSR 179          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU31_DECAR (3-isopropylmalate dehydrogenase 1 OS=Dechloromonas aromatica (strain RCB) GN=leuB1 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.842e-45
Identity = 95/179 (53.07%), Postives = 126/179 (70.39%), Query Frame = 1
Query:  136 ITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            I +LPGDGIGPE+ A A  VL    SL+ ++F  +E  +GG A+D  G P PE T   A+ +DAVLLGA+GG KWD   +  +PE GLL IR+ L +FANLRPA + P+L ++STLK EV  G+D++++RELTG IYFG+PRG    E+GE +GFNT VY+  E+ RI  VAF+ A+KR
Sbjct:    3 ICVLPGDGIGPEITAQAVRVLN---SLD-LKFEMEEALLGGGAVDATGNPYPEATQKLARAADAVLLGAVGGPKWDSLPREQRPERGLLGIRKDLNLFANLRPAILYPELANASTLKPEVVAGLDILIIRELTGDIYFGQPRGVR-EENGERVGFNTMVYSESEIRRIGHVAFQAAQKR 176          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_CARHZ (3-isopropylmalate dehydrogenase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=leuB PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.712e-45
Identity = 92/182 (50.55%), Postives = 127/182 (69.78%), Query Frame = 1
Query:  130 YSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPET-GLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            + I +LPGDGIGPE+I  A  VLK  G  +GI F FQ   +GG+A+D  GVPLPEET+   KQ DA+LLGA+GG KWD     ++PE  GLL+IR+   ++ANLRP    P+L ++S LK ++ EGVD+++VRELTGG+YFG+ + +  TE GE+   +T +Y   EV+R+ R+ FE A+KR
Sbjct:   10 FKILVLPGDGIGPEIIKEAVKVLKALGEKKGITFNFQYGLIGGAAIDERGVPLPEETVELGKQCDAILLGAVGGPKWDNLPPEIRPELGGLLKIRKVFDLYANLRPVMFFPELKNASPLKPDIIEGVDILMVRELTGGLYFGEKKRF-TTEQGEQAVIDTLIYTEKEVERVVRLGFELAQKR 190          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_NITMU (3-isopropylmalate dehydrogenase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=leuB PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.849e-45
Identity = 91/179 (50.84%), Postives = 127/179 (70.95%), Query Frame = 1
Query:  136 ITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            I +L GDGIGPE++A A  VL+   S +G++   ++  +GG A+D  G P P  T     Q+DAV+LGA+GG ++D   + L+PE GLL IR+ L +FANLRPA + P+L D+STLK EV  G+D+++VRELTG IYFG+PRG  +  +G+ IG+NT +Y+  E+ RIARVAF+ ARKR
Sbjct:    3 IAILAGDGIGPEIVAQAVRVLETLRS-DGLKLELEQGLLGGCAVDAAGEPFPAATRTLVAQADAVILGAVGGPRYDGLPRQLRPEQGLLGIRKALNLFANLRPAVLYPELADASTLKPEVVSGLDILIVRELTGDIYFGEPRGIEL-RNGQRIGYNTMIYSEAEIRRIARVAFQAARKR 179          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_AZOSE (3-isopropylmalate dehydrogenase OS=Azoarcus sp. (strain EbN1) GN=leuB PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 4.849e-45
Identity = 94/179 (52.51%), Postives = 125/179 (69.83%), Query Frame = 1
Query:  136 ITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            I +LPGDGIGPE+ A A  V++       ++F  +E  +GG+A+D  G P PE T   A+++DAVLLGA+GG KWD   +  +PE GLL IR+ L +FANLRPA + P+L ++S+LK EV  G+D+++VRELTG IYFG+PRG  V + GE  GFNT  Y+  E+ RI RVAFE ARKR
Sbjct:    3 ICILPGDGIGPEITAEAVRVIEALD----LKFEMEEALLGGAAVDATGDPYPEATRKLAREADAVLLGAVGGPKWDTLPREQRPERGLLGIRKDLGLFANLRPAILYPELANASSLKPEVVAGLDILIVRELTGDIYFGQPRGLEVRD-GERFGFNTMHYSESEIRRIGRVAFEAARKR 176          
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_THEAQ (3-isopropylmalate dehydrogenase OS=Thermus aquaticus GN=leuB PE=3 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 6.332e-45
Identity = 91/179 (50.84%), Postives = 121/179 (67.60%), Query Frame = 1
Query:  136 ITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672
            + +LPGDGIGPEV   A  VLK     EG+   ++  P GG+A+D  G P PE T    + ++AVLLG++GG KWD   + ++PE+GLL +R+   +FANLRPA V P L   S LK+E+A GVD+++VRELTGGIYFG+PRG    E      +NTE Y+  EV+R+A+VAFE ARKR
Sbjct:    3 VAVLPGDGIGPEVTEAALRVLKALDEREGLGLTYETFPFGGAAIDGYGEPFPEVTRKGVEAAEAVLLGSVGGPKWDALPRKIRPESGLLALRKSQDLFANLRPAKVFPGLERLSPLKEEIARGVDVLIVRELTGGIYFGEPRGMSEAE-----AWNTERYSKPEVERVAKVAFEAARKR 176          
The following BLAST results are available for this feature:
BLAST of DN621538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 292
Match NameE-valueIdentityDescription
LEU3_XANOR1.666e-4551.963-isopropylmalate dehydrogenase OS=Xanthomonas ory... [more]
LEU3_XANOM1.666e-4551.963-isopropylmalate dehydrogenase OS=Xanthomonas ory... [more]
LEU3_XANAC1.666e-4551.963-isopropylmalate dehydrogenase OS=Xanthomonas axo... [more]
LEU3_PELLD2.176e-4553.593-isopropylmalate dehydrogenase OS=Pelodictyon lut... [more]
LEU3_SULDN2.842e-4552.463-isopropylmalate dehydrogenase OS=Sulfurimonas de... [more]
LEU31_DECAR2.842e-4553.073-isopropylmalate dehydrogenase 1 OS=Dechloromonas... [more]
LEU3_CARHZ3.712e-4550.553-isopropylmalate dehydrogenase OS=Carboxydothermu... [more]
LEU3_NITMU4.849e-4550.843-isopropylmalate dehydrogenase OS=Nitrosospira mu... [more]
LEU3_AZOSE4.849e-4552.513-isopropylmalate dehydrogenase OS=Azoarcus sp. (s... [more]
LEU3_THEAQ6.332e-4550.843-isopropylmalate dehydrogenase OS=Thermus aquatic... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_06N15_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0006N15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN621538 ID=DN621538; Name=DN621538; organism=Citrus sinensis; type=EST; length=674bp
GCGGCGTCAGTGCAGCTGAATGCGAAGCTACTTGGACCCGCGTTTATTGT
TAAACCCGCAACCAAACACTTTCTTAAACCGGCAAGAATCAGGTGCGCCG
CTGCTGCCACCGCACCACCCACCAAACGGTACAGCATCACTCTACTCCCC
GGCGATGGCATCGGCCCCGAAGTCATCGCCGTCGCCAAAAACGTCCTCAA
GCTCGCTGGCTCTCTCGAAGGGATTGAATTTGCATTCCAAGAGATGCCAA
TGGGGGGATCAGCCTTGGATTTGGTTGGAGTTCCGTTACCTGAGGAGACA
CTTGCAGCAGCGAAGCAATCTGATGCAGTTCTACTTGGCGCAATTGGAGG
GTATAAATGGGATAAAAATGAGAAACATTTGAAGCCAGAGACTGGATTGC
TTCAGATTCGAGAAGGTCTTAAAGTCTTTGCAAATTTGAGGCCAGCAACT
GTTTTACCACAGTTAGTGGACTCTTCCACTTTGAAGAAGGAGGTTGCTGA
AGGTGTTGACCTTATGGTTGTAAGGGAGCTCACCGGAGGTATTTATTTTG
GAAAGCCCAGGGGCTATGGTGTTACTGAACATGGTGAGGAGATTGGCTTC
AATACAGAGGTTTATGCTGCCTACGAGGTGGATCGTATTGCTCGTGTTGC
TTTTGAGACTGCTCGGAAACGTCA
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