DN621538
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_RHOP2 (3-isopropylmalate dehydrogenase OS=Rhodopseudomonas palustris (strain HaA2) GN=leuB PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.236e-40 Identity = 83/181 (45.86%), Postives = 119/181 (65.75%), Query Frame = 1 Query: 130 YSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 + + LLPGDGIG EV+A ++ F + +GG+A D V + + T+A A+ SDAV+ GA+GG KWD +PE GLL++R+ L +FANLRPA P L ++S+LK EV EG+D+M+VRELTGG+YFG+P+ +G++ +T+VY YE++RI RVAF+ ARKR Sbjct: 4 HKLLLLPGDGIGTEVMAEVSRLIDWLNKAGIASFETEHGLVGGAAYDADKVAITDATMALAQASDAVIFGAVGGPKWDAVPYDARPEAGLLRLRKDLALFANLRPAVCYPALAEASSLKPEVVEGLDIMIVRELTGGVYFGEPKTITDLGNGQKRAIDTQVYDTYEIERIGRVAFDLARKR 184
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_CLOAB (3-isopropylmalate dehydrogenase OS=Clostridium acetobutylicum GN=leuB PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.236e-40 Identity = 92/184 (50.00%), Postives = 121/184 (65.76%), Query Frame = 1 Query: 124 KRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVA-EGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 K Y + ++PGDGIG E++ A VL+ G+ +F F E+ GG A+D GVPLP ETL K SDAVLLGA+GG KWD +PE L+ +R GL ++ANLRPA V L +S LK+E+ +GVDL+VVRELTGGIYFG+ RG + ++G ++TE Y E+ RIA VAF+ A KR Sbjct: 2 KEYKVAVIPGDGIGVEIVGEALKVLEKVGAKYDTKFNFTEVKAGGCAIDEFGVPLPNETLEICKNSDAVLLGAVGGPKWDTLPGEKRPEKALMGLRGGLGLYANLRPAKVYDILKSASPLKEEIINKGVDLLVVRELTGGIYFGE-RGRDI-QNGINSAYDTERYNVEEIKRIAHVAFKAALKR 183
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_BURTA (3-isopropylmalate dehydrogenase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=leuB PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.236e-40 Identity = 87/183 (47.54%), Postives = 120/183 (65.57%), Query Frame = 1 Query: 136 ITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEH----GEEIGFNTEVYAAYEVDRIARVAFETARKR 672 I +LPGDGIGPE++ A VL +F + P+GG+ + G PLP+ TLA AK++DA+L GA+G +K+D E+ L+PE +L +R+ L++FAN RPA PQLVD+S LK E+ G+D+++VREL G IYFG+PRG GE GF+T Y+ EV RIA VAF+ A+KR Sbjct: 3 IAVLPGDGIGPEIVNEAVKVLNALDE----KFELEHAPVGGAGYEASGHPLPDATLALAKEADAILFGAVGDWKYDSLERALRPEQAILGLRKHLELFANFRPAICYPQLVDASPLKPELVAGLDILIVRELNGDIYFGQPRGVRAAPDGPFAGEREGFDTMRYSEPEVRRIAHVAFQAAQKR 181
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_BURPS (3-isopropylmalate dehydrogenase OS=Burkholderia pseudomallei GN=leuB PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.236e-40 Identity = 87/183 (47.54%), Postives = 120/183 (65.57%), Query Frame = 1 Query: 136 ITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEH----GEEIGFNTEVYAAYEVDRIARVAFETARKR 672 I +LPGDGIGPE++ A VL +F ++ P+GG+ + G PLP+ TLA AK++DA+L GA+G +K+D E+ L+PE +L +R+ L++FAN RPA PQLVD+S LK E+ G+D+++VREL G IYFG+PRG G GF+T Y+ EV RIA VAF+ ARKR Sbjct: 3 IAVLPGDGIGPEIVNEAVKVLNALDE----KFELEQAPVGGAGYEASGHPLPDATLALAKEADAILFGAVGDWKYDSLERALRPEQAILGLRKHLELFANFRPAICYPQLVDASPLKPELVAGLDILIVRELNGDIYFGQPRGVRAAPDGPFAGAREGFDTMRYSEPEVRRIAHVAFQAARKR 181
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_BURP1 (3-isopropylmalate dehydrogenase OS=Burkholderia pseudomallei (strain 1710b) GN=leuB PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.236e-40 Identity = 87/183 (47.54%), Postives = 120/183 (65.57%), Query Frame = 1 Query: 136 ITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEH----GEEIGFNTEVYAAYEVDRIARVAFETARKR 672 I +LPGDGIGPE++ A VL +F ++ P+GG+ + G PLP+ TLA AK++DA+L GA+G +K+D E+ L+PE +L +R+ L++FAN RPA PQLVD+S LK E+ G+D+++VREL G IYFG+PRG G GF+T Y+ EV RIA VAF+ ARKR Sbjct: 3 IAVLPGDGIGPEIVNEAVKVLNALDE----KFELEQAPVGGAGYEASGHPLPDATLALAKEADAILFGAVGDWKYDSLERALRPEQAILGLRKHLELFANFRPAICYPQLVDASPLKPELVAGLDILIVRELNGDIYFGQPRGVRAAPDGPFAGAREGFDTMRYSEPEVRRIAHVAFQAARKR 181
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_BURMA (3-isopropylmalate dehydrogenase OS=Burkholderia mallei GN=leuB PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 1.236e-40 Identity = 87/183 (47.54%), Postives = 120/183 (65.57%), Query Frame = 1 Query: 136 ITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEH----GEEIGFNTEVYAAYEVDRIARVAFETARKR 672 I +LPGDGIGPE++ A VL +F ++ P+GG+ + G PLP+ TLA AK++DA+L GA+G +K+D E+ L+PE +L +R+ L++FAN RPA PQLVD+S LK E+ G+D+++VREL G IYFG+PRG G GF+T Y+ EV RIA VAF+ ARKR Sbjct: 3 IAVLPGDGIGPEIVNEAVKVLNALDE----KFELEQAPVGGAGYEASGHPLPDATLALAKEADAILFGAVGDWKYDSLERALRPEQAILGLRKHLELFANFRPAICYPQLVDASPLKPELVAGLDILIVRELNGDIYFGQPRGVRAAPDGPFAGAREGFDTMRYSEPEVRRIAHVAFQAARKR 181
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_THIFE (3-isopropylmalate dehydrogenase OS=Thiobacillus ferrooxidans GN=leuB PE=1 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.614e-40 Identity = 87/179 (48.60%), Postives = 117/179 (65.36%), Query Frame = 1 Query: 136 ITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 I + GDGIGPE++A A+ VL + E +GG+ALD PLP +L A +DAV+LGA+GG +WD +PE GLL++R+GL ++ANLRPA + PQL+D+S L+ E+ VD++VVRELTG IYFG+PRG V + G+ GFNT VY E+ RIA VAF A+ R Sbjct: 4 IAIFAGDGIGPEIVAAARQVLDAVDQAAHLGLRCTEGLVGGAALDASDDPLPAASLQLAMAADAVILGAVGGPRWDAYPPAKRPEQGLLRLRKGLDLYANLRPAQIFPQLLDASPLRPELVRDVDILVVRELTGDIYFGQPRGLEVID-GKRRGFNTMVYDEDEIRRIAHVAFRAAQGR 181
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_VIBPA (3-isopropylmalate dehydrogenase OS=Vibrio parahaemolyticus GN=leuB PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.108e-40 Identity = 91/185 (49.19%), Postives = 123/185 (66.49%), Query Frame = 1 Query: 124 KRYSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETG-LLQIREGLKVFANLRPATVLPQLVDSSTLKKEVA-EGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 K Y I +LPGDGIGPEV+A A VL GI F +E +GG A+D G PLPE T+ A ++SDAVL G++GG KW+ + +PE G LL +R+ ++F NLRPA + L S L+ +++ G D++VVRELTGGIYFG+P+G E E F+TEVY YE++RIA++AFE+AR R Sbjct: 4 KSYKIAVLPGDGIGPEVMAQAHKVLDAIEQKHGISFEREEHDVGGIAIDNHGCPLPESTVTACEESDAVLFGSVGGPKWEHLPPNDQPERGALLPLRKHFQLFCNLRPAQIHAGLEAFSPLRADISGRGFDIVVVRELTGGIYFGQPKG-REGEGANEKAFDTEVYHRYEIERIAKIAFESARLR 187
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_VIBCH (3-isopropylmalate dehydrogenase OS=Vibrio cholerae GN=leuB PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.108e-40 Identity = 91/183 (49.73%), Postives = 123/183 (67.21%), Query Frame = 1 Query: 130 YSITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETG-LLQIREGLKVFANLRPATVLPQLVDSSTLKKEV-AEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 Y I +LPGDGIGPEV+A A VL GI F+ +E +GG A+D G PLPE TL A +++DAVL G++GG KW+ + +PE G LL +R+ ++F NLRPA + L S L+ ++ A G D++VVRELTGGIYFG+P+G E E F+TEVY +E++RIAR+AFE+AR R Sbjct: 6 YKIAVLPGDGIGPEVMAQAHKVLDAIEQKHGIRFSREEHDVGGIAIDNHGCPLPESTLRACEEADAVLFGSVGGPKWEHLPPNEQPERGALLPLRKHFQLFCNLRPAQIHQGLEAFSPLRADISARGFDIVVVRELTGGIYFGQPKG-REGEGAHEKAFDTEVYHRFEIERIARIAFESARLR 187
BLAST of DN621538 vs. ExPASy Swiss-Prot
Match: LEU3_CAUCR (3-isopropylmalate dehydrogenase OS=Caulobacter crescentus GN=leuB PE=3 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.108e-40 Identity = 87/180 (48.33%), Postives = 117/180 (65.00%), Query Frame = 1 Query: 133 SITLLPGDGIGPEVIAVAKNVLKLAGSLEGIEFAFQEMPMGGSALDLVGVPLPEETLAAAKQSDAVLLGAIGGYKWDKNEKHLKPETGLLQIREGLKVFANLRPATVLPQLVDSSTLKKEVAEGVDLMVVRELTGGIYFGKPRGYGVTEHGEEIGFNTEVYAAYEVDRIARVAFETARKR 672 ++ LLPGDGIGPEV A V ++A +L + E GG++ D G PL +E A SDAVL+GA+GG KW +HL+PE GLL +R+ + VFANLRPA L +S+LK E+ G+D+M VREL GG+YFG+PRG G++ GF+T+VY E++R+ RVAFE AR R Sbjct: 3 TLLLLPGDGIGPEVCA---QVRRVAAALTP-DLKVDEALYGGASYDTHGTPLTDEVREQALASDAVLMGAVGGPKWADAPRHLRPEAGLLNLRKAMDVFANLRPAYCFEALAGASSLKPELVSGLDIMFVRELVGGVYFGQPRGIEDLADGQKKGFDTQVYTTSEIERVGRVAFELARGR 178 The following BLAST results are available for this feature:
BLAST of DN621538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 292
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN621538 ID=DN621538; Name=DN621538; organism=Citrus sinensis; type=EST; length=674bpback to top |